PDB: 46006 件ウェブページステータス検索Chemie searchBIRD

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1VQL	The structure of the transition state analogue "DCSN" bound to the large ribosomal subunit of haloarcula marismortui 分子名称: 23S ribosomal rna, 5'-R(*CP*CP*(PPU)*(TSE)*(DA)*CP*C)-3', 50S RIBOSOMAL PROTEIN L10E, ... 著者 Schmeing, T.M, Steitz, T.A. 登録日 2004-12-16 公開日 2005-11-29 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Insights into the Roles of Water and the 2' Hydroxyl of the P Site tRNA in the Peptidyl Transferase Reaction. Mol.Cell, 20, 2005
7KSE	Crystal structure of Prototype Foamy Virus Protease-Reverse Transcriptase CSH mutant (selenomethionine-labeled) 分子名称: CALCIUM ION, Peptidase A9/Reverse transcriptase/RNase H 著者 Harrison, J.J.E.K, Das, K, Ruiz, F.X, Arnold, E. 登録日 2020-11-21 公開日 2021-08-11 最終更新日 2021-09-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal Structure of a Retroviral Polyprotein: Prototype Foamy Virus Protease-Reverse Transcriptase (PR-RT). Viruses, 13, 2021
7KSF	Crystal structure of Prototype Foamy Virus Protease-Reverse Transcriptase (native) 分子名称: CALCIUM ION, Protease/Reverse transcriptase/ribonuclease H 著者 Harrison, J.J.E.K, Das, K, Ruiz, F.X, Arnold, E. 登録日 2020-11-21 公開日 2021-08-11 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Crystal Structure of a Retroviral Polyprotein: Prototype Foamy Virus Protease-Reverse Transcriptase (PR-RT). Viruses, 13, 2021
1W93	Crystal Structure of Biotin Carboxylase Domain of Acetyl-Coenzyme A Carboxylase from Saccharomyces cerevisiae 分子名称: ACETYL-COENZYME A CARBOXYLASE 著者 Shen, Y, Volrath, S.L, Weatherly, S.C, Elich, T.D, Tong, L. 登録日 2004-10-05 公開日 2005-01-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A Mechanism for the Potent Inhibition of Eukaryotic Acetyl-Coenzyme a Carboxylase by Soraphen A, a Macrocyclic Polyketide Natural Product Mol.Cell, 16, 2004
2Y48	Crystal structure of LSD1-CoREST in complex with a N-terminal SNAIL peptide 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC DEMETHYLASE 1A, REST COREPRESSOR 1, ... 著者 Baron, R, Binda, C, Tortorici, M, McCammon, J.A, Mattevi, A. 登録日 2011-01-05 公開日 2011-02-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Molecular Mimicry and Ligand Recognition in Binding and Catalysis by the Histone Demethylase Lsd1-Corest Complex. Structure, 19, 2011
8WF7	The Crystal Structure of integrase from Biortus 分子名称: ACETATE ION, Integrase, SULFATE ION 著者 Wang, F, Cheng, W, Yuan, Z, Qi, J, Li, J. 登録日 2023-09-19 公開日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 The Crystal Structure of integrase from Biortus To Be Published
2Y0I	FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH TANKYRASE-2 (TNKS2) FRAGMENT PEPTIDE (21-MER) 分子名称: 2-OXOGLUTARIC ACID, FE (II) ION, GLYCEROL, ... 著者 Chowdhury, R, McDonough, M.A, Schofield, C.J. 登録日 2010-12-02 公開日 2011-02-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Factor-inhibiting hypoxia-inducible factor (FIH) catalyses the post-translational hydroxylation of histidinyl residues within ankyrin repeat domains. FEBS J., 278, 2011
1W2B	Trigger Factor ribosome binding domain in complex with 50S 分子名称: 23S RRNA, 50S RIBOSOMAL PROTEIN L10E, 50S RIBOSOMAL PROTEIN L13P, ... 著者 Ferbitz, L, Maier, T, Patzelt, H, Bukau, B, Deuerling, E, Ban, N. 登録日 2004-07-01 公開日 2004-09-02 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Trigger Factor in Complex with the Ribosome Forms a Molecular Cradle for Nascent Proteins Nature, 431, 2004
8BJV	Crystal structure of YopR 分子名称: GLYCEROL, SPbeta prophage-derived uncharacterized protein YopR 著者 Gallego del Sol, F, Marina, A. 登録日 2022-11-08 公開日 2023-11-22 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Characterization of a unique repression system present in arbitrium phages of the SPbeta family. Cell Host Microbe, 31, 2023
1VQN	The structure of CC-HPMN AND CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui 分子名称: 23S ribosomal rna, 5'-R(*CP*CP*(PPU)*(LOF))-3', 5'-R(*CP*CP*AP*(PHE)*(ACA)*(BTN))-3', ... 著者 Schmeing, T.M, Steitz, T.A. 登録日 2004-12-16 公開日 2005-11-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 An induced-fit mechanism to promote peptide bond formation and exclude hydrolysis of peptidyl-tRNA. Nature, 438, 2005
8BPZ	Crystal structure of YopR 分子名称: SPbeta prophage-derived uncharacterized protein YopR 著者 Gallego del Sol, F, Marina, A. 登録日 2022-11-18 公開日 2023-11-29 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Characterization of a unique repression system present in arbitrium phages of the SPbeta family. Cell Host Microbe, 31, 2023
1VY7	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Polikanov, Y.S, Steitz, T.A, Innis, C.A. 登録日 2014-05-13 公開日 2014-08-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome. Nat.Struct.Mol.Biol., 21, 2014
6CIV	Lactam cyclised mimetic of a fragment of p21 分子名称: p21 著者 Wegener, K.L. 登録日 2018-02-25 公開日 2018-07-04 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Rational Design of a 310-Helical PIP-Box Mimetic Targeting PCNA, the Human Sliding Clamp. Chemistry, 24, 2018
3VQE	HIV-1 IN core domain in complex with [1-(4-fluorophenyl)-5-methyl-1H-pyrazol-4-yl]methanol 分子名称: CADMIUM ION, CHLORIDE ION, POL polyprotein, ... 著者 Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J. 登録日 2012-03-21 公開日 2013-01-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification? J Biomol Screen, 18, 2013
3VQC	HIV-1 IN core domain in complex with (5-METHYL-3-PHENYL-1,2-OXAZOL-4-YL)METHANOL 分子名称: (5-methyl-3-phenyl-1,2-oxazol-4-yl)methanol, CADMIUM ION, POL polyprotein, ... 著者 Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J. 登録日 2012-03-21 公開日 2013-01-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification? J Biomol Screen, 18, 2013
6CBH	Macrophage Migration Inhibitory Factor in Complex with a Pyrazole Inhibitor (8m) 分子名称: 5-(3-fluoro-1H-pyrazol-4-yl)-2-[(naphthalen-2-yl)oxy]benzoic acid, GLYCEROL, ISOPROPYL ALCOHOL, ... 著者 Robertson, M.J, Krimmer, S.G, Jorgensen, W.L. 登録日 2018-02-02 公開日 2018-04-04 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Optimization of Pyrazoles as Phenol Surrogates to Yield Potent Inhibitors of Macrophage Migration Inhibitory Factor. ChemMedChem, 13, 2018
2BRN	Structure-based Design of Novel Chk1 Inhibitors: Insights into Hydrogen Bonding and Protein-Ligand Affinity 分子名称: (2R)-1-[(5,6-DIPHENYL-7H-PYRROLO[2,3-D]PYRIMIDIN-4-YL)AMINO]PROPAN-2-OL, SERINE/THREONINE-PROTEIN KINASE CHK1 著者 Foloppe, N, Fisher, L.M, Howes, R, Kierstan, P, Potter, A, Robertson, A.G.S, Surgenor, A.E. 登録日 2005-05-09 公開日 2005-05-12 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure-Based Design of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding and Protein-Ligand Affinity. J.Med.Chem., 48, 2005
7XWY	Crystal structure of spFft3 N-terminal truncation 分子名称: ATP-dependent helicase fft3, SULFATE ION 著者 Zhang, N, Jiang, T, Huo, Y. 登録日 2022-05-27 公開日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Crystal structure of spFft3 N-terminal truncation To Be Published
7XXE	Crystal structure of spFft3 C-terminal truncation 分子名称: ATP-dependent helicase fft3 著者 Nan, Z, Tao, J, Yangao, H. 登録日 2022-05-30 公開日 2023-12-06 実験手法 X-RAY DIFFRACTION (4.202 Å) 主引用文献 Crystal structure of spFft3 C-terminal truncation To Be Published
8TAR	APC/C-CDH1-UBE2C-Ubiquitin-CyclinB-NTD 分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ... 著者 Bodrug, T, Welsh, K.A, Bolhuis, D.L, Paulakonis, E, Martinez-Chacin, R.C, Liu, B, Pinkin, N, Bonacci, T, Cui, L, Xu, P, Roscow, O, Amann, S.J, Grishkovskaya, I, Emanuele, M.J, Harrison, J.S, Steimel, J.P, Hahn, K.M, Zhang, W, Zhong, E, Haselbach, D, Brown, N.G. 登録日 2023-06-27 公開日 2023-09-27 最終更新日 2023-11-22 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Time-resolved cryo-EM (TR-EM) analysis of substrate polyubiquitination by the RING E3 anaphase-promoting complex/cyclosome (APC/C). Nat.Struct.Mol.Biol., 30, 2023
4KR1	Crystal structure of the kinetechore protein Iml3 from budding yeast 分子名称: Central kinetochore subunit IML3 著者 Tao, Y, Guo, Q, Teng, M. 登録日 2013-05-16 公開日 2013-12-18 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural insights into the role of the Chl4-Iml3 complex in kinetochore assembly Acta Crystallogr.,Sect.D, 69, 2013
8TAU	APC/C-CDH1-UBE2C-UBE2S-Ubiquitin-CyclinB 分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ... 著者 Bodrug, T, Welsh, K.A, Bolhuis, D.L, Paulakonis, E, Martinez-Chacin, R.C, Liu, B, Pinkin, N, Bonacci, T, Cui, L, Xu, P, Roscow, O, Amann, S.J, Grishkovskaya, I, Emanuele, M.J, Harrison, J.S, Steimel, J.P, Hahn, K.M, Zhang, W, Zhong, E, Haselbach, D, Brown, N.G. 登録日 2023-06-27 公開日 2023-09-27 最終更新日 2023-12-13 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Time-resolved cryo-EM (TR-EM) analysis of substrate polyubiquitination by the RING E3 anaphase-promoting complex/cyclosome (APC/C). Nat.Struct.Mol.Biol., 30, 2023
2YHT	Crystal structure of Hfq riboregulator from E. coli (P1 space group) 分子名称: PROTEIN HFQ 著者 Basquin, J, Sauter, C. 登録日 2011-05-06 公開日 2011-11-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Exploiting Protein Engineering and Crystal Polymorphism for Successful X-Ray Structure Determination Cryst.Growth Des., 11, 2011
1HI8	RNA dependent RNA polymerase from dsRNA bacteriophage phi6 分子名称: MAGNESIUM ION, P2 PROTEIN 著者 Grimes, J.M, Butcher, S.J, Makeyev, E.V, Bamford, D.H, Stuart, D.I. 登録日 2001-01-03 公開日 2001-03-27 最終更新日 2019-09-18 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A Mechanism for Initiating RNA-Dependent RNA Polymerization Nature, 410, 2001
1WPS	Crystal Structure of HutP, an RNA binding anti-termination protein 分子名称: Hut operon positive regulatory protein 著者 Kumarevel, T.S, Mizuno, H, Kumar, P.K.R. 登録日 2004-09-13 公開日 2005-03-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis of HutP-mediated anti-termination and roles of the Mg2+ ion and L-histidine ligand. Nature, 434, 2005

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