PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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7TDC	Crystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, calcium ions 分子名称: CALCIUM ION, MAGNESIUM ION, [2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-1,3-thiazol-5-yl]ethoxy-oxidanyl-phosphoryl]methylphosphonic acid, ... 著者 Nuthanakanti, A, Serganov, A. 登録日 2021-12-30 公開日 2022-02-16 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 Subsite Ligand Recognition and Cooperativity in the TPP Riboswitch: Implications for Fragment-Linking in RNA Ligand Discovery. Acs Chem.Biol., 17, 2022
2O2W	Extending powder diffraction to proteins: structure solution of the second SH3 domain from ponsin 分子名称: Ponsin 著者 Pinotsis, N, Margiolaki, I. 登録日 2006-11-30 公開日 2007-10-23 最終更新日 2023-12-27 実験手法 POWDER DIFFRACTION 主引用文献 Second SH3 domain of ponsin solved from powder diffraction J.Am.Chem.Soc., 129, 2007
3J83	Heptameric EspB Rosetta model guided by EM density 分子名称: ESX-1 secretion-associated protein EspB 著者 Solomonson, M, DiMaio, F, Strynadka, N.C.J. 登録日 2014-09-30 公開日 2015-03-11 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (30 Å) 主引用文献 Structure of EspB from the ESX-1 Type VII Secretion System and Insights into its Export Mechanism. Structure, 23, 2015
7TDA	Crystal structure of the E. coli thiM riboswitch in complex with thiamine pyrophosphate, manganese ions 分子名称: MAGNESIUM ION, MANGANESE (II) ION, THIAMINE DIPHOSPHATE, ... 著者 Nuthanakanti, A, Serganov, A. 登録日 2021-12-30 公開日 2022-02-16 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Subsite Ligand Recognition and Cooperativity in the TPP Riboswitch: Implications for Fragment-Linking in RNA Ligand Discovery. Acs Chem.Biol., 17, 2022
6ZTZ	Assembly intermediates of orthoreovirus captured in the cell 分子名称: Inner capsid protein lambda-1, Inner capsid protein sigma-2, Outer capsid protein lambda-2, ... 著者 Sutton, G.C, Stuart, D.I. 登録日 2020-07-20 公開日 2020-09-16 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY 主引用文献 Assembly intermediates of orthoreovirus captured in the cell. Nat Commun, 11, 2020
3J91	Cryo-electron microscopy of Enterovirus 71 (EV71) procapsid in complex with Fab fragments of neutralizing antibody 22A12 分子名称: VP0, VP1, VP3 著者 Shingler, K.L, Cifuente, J.O, Ashley, R.E, Makhov, A.M, Conway, J.F, Hafenstein, S. 登録日 2014-11-24 公開日 2014-12-10 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (8.8 Å) 主引用文献 The enterovirus 71 procapsid binds neutralizing antibodies and rescues virus infection in vitro. J.Virol., 89, 2015
7TAP	Cryo-EM structure of archazolid A bound to yeast VO V-ATPase 分子名称: Archazolid A, V-type proton ATPase subunit a, vacuolar isoform, ... 著者 Keon, K.A, Rubinstein, J.L, Benlekbir, S, Kirsch, S.H, Muller, R. 登録日 2021-12-21 公開日 2022-02-23 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Cryo-EM of the Yeast V O Complex Reveals Distinct Binding Sites for Macrolide V-ATPase Inhibitors. Acs Chem.Biol., 17, 2022
5LF2	Crystal structure of laminin beta2 LE5-LF-LE6 分子名称: CALCIUM ION, CHLORIDE ION, Laminin subunit beta-2 著者 Pulido, D, Hohenester, E. 登録日 2016-06-30 公開日 2016-07-27 最終更新日 2017-03-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystallographic analysis of the laminin beta 2 short arm reveals how the LF domain is inserted into a regular array of LE domains. Matrix Biol., 57-58, 2017
3J31	Life in the extremes: atomic structure of Sulfolobus Turreted Icosahedral Virus 分子名称: A223 penton base, A55 membrane protein, C381 turret protein, ... 著者 Veesler, D, Ng, T.S, Sendamarai, A.K, Eilers, B.J, Lawrence, C.M, Lok, S.M, Young, M.J, Johnson, J.E, Fu, C.-Y. 登録日 2013-02-18 公開日 2013-05-01 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography. Proc.Natl.Acad.Sci.USA, 110, 2013
7RAS	Structure of TRPV3 in complex with osthole 分子名称: 7-methoxy-8-(3-methylbut-2-enyl)chromen-2-one, Transient receptor potential cation channel subfamily V member 3 著者 Neuberger, A, Nadezhdin, K.D, Sobolevsky, A.I. 登録日 2021-07-02 公開日 2021-09-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.64 Å) 主引用文献 Structural mechanism of TRPV3 channel inhibition by the plant-derived coumarin osthole. Embo Rep., 22, 2021
5LI7	Crystal structure of Mycobacterium tuberculosis CYP126A1 in complex with 1-(3-(1H-imidazol-1-yl)propyl)-3-((3s,5s,7s)-adamantan-1-yl)urea 分子名称: 1-(1-adamantyl)-3-(3-imidazol-1-ylpropyl)urea, PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450 126 著者 Levy, C, Munro, A.W, Leys, D. 登録日 2016-07-14 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Structural Characterization and Ligand/Inhibitor Identification Provide Functional Insights into the Mycobacterium tuberculosis Cytochrome P450 CYP126A1. J. Biol. Chem., 292, 2017
3J94	Structure of ATP-bound N-ethylmaleimide sensitive factor determined by single particle cryoelectron microscopy 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Vesicle-fusing ATPase 著者 Zhao, M, Wu, S, Cheng, Y, Brunger, A.T. 登録日 2014-12-05 公開日 2015-01-28 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Mechanistic insights into the recycling machine of the SNARE complex. Nature, 518, 2015
2XVU	Human serum albumin complexed with dansyl-L-asparagine 分子名称: DANSYL-L-ASPARAGINE, SERUM ALBUMIN 著者 Zunszain, P.A, Curry, S. 登録日 2010-10-28 公開日 2010-11-10 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural Basis of Binding of Fluorescent, Site-Specific Dansylated Amino Acids to Human Serum Albumin. J.Struct.Biol., 174, 2011
7RAU	Structure of TRPV3 in complex with osthole 分子名称: 7-methoxy-8-(3-methylbut-2-enyl)chromen-2-one, Transient receptor potential cation channel subfamily V member 3 著者 Neuberger, A, Nadezhdin, K.D, Sobolevsky, A.I. 登録日 2021-07-02 公開日 2021-09-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.99 Å) 主引用文献 Structural mechanism of TRPV3 channel inhibition by the plant-derived coumarin osthole. Embo Rep., 22, 2021
2XBR	Raman crystallography of Hen White Egg Lysozyme - Low X-ray dose (0.2 MGy) 分子名称: CHLORIDE ION, LYSOZYME C 著者 Carpentier, P, Royant, A, Weik, M, Bourgeois, D. 登録日 2010-04-14 公開日 2010-11-24 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.29 Å) 主引用文献 Raman Assisted Crystallography Reveals a Mechanism of X-Ray Induced Reversible Disulfide Radical Formation Structure, 18, 2010
3J9R	Atomic structures of a bactericidal contractile nanotube in its pre- and post-contraction states 分子名称: sheath 著者 Ge, P, Scholl, D, Leiman, P.G, Yu, X, Miller, J.F, Zhou, Z.H. 登録日 2015-02-17 公開日 2015-04-01 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states. Nat.Struct.Mol.Biol., 22, 2015
2NSE	BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE SUBSTRATE COMPLEX 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ARGININE, CACODYLATE ION, ... 著者 Raman, C.S, Li, H, Martasek, P, Kral, V, Masters, B.S.S, Poulos, T.L. 登録日 1998-08-13 公開日 1999-05-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Crystal structure of constitutive endothelial nitric oxide synthase: a paradigm for pterin function involving a novel metal center. Cell(Cambridge,Mass.), 95, 1998
7RL1	AAVrh.10-7x capsid 分子名称: Capsid protein VP1, DNA (5'-D(*CP*A)-3') 著者 Mietzsch, M, McKenna, R. 登録日 2021-07-23 公開日 2021-09-08 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.71 Å) 主引用文献 Structural Study of Aavrh.10 Receptor and Antibody Interactions. J.Virol., 95, 2021
7TZB	Crystal structure of the human mitochondrial seryl-tRNA synthetase (mt SerRS) bound with a seryl-adenylate analogue 分子名称: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, Serine--tRNA ligase, mitochondrial 著者 Kuhle, B, Hirschi, M, Doerfel, L, Lander, G, Schimmel, P. 登録日 2022-02-15 公開日 2022-09-14 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structural basis for shape-selective recognition and aminoacylation of a D-armless human mitochondrial tRNA. Nat Commun, 13, 2022
8RHN	Structure of the 55LCC ATPase complex 分子名称: ATPase family gene 2 protein homolog A, ATPase family gene 2 protein homolog B, Cyclin-dependent kinase 2-interacting protein, ... 著者 Foglizzo, M, Degtjarik, O, Zeqiraj, E. 登録日 2023-12-15 公開日 2024-03-27 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 The SPATA5-SPATA5L1 ATPase complex directs replisome proteostasis to ensure genome integrity. Cell, 187, 2024
3JAL	Cryo-EM structure of GMPCPP-microtubule co-polymerized with EB3 分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Microtubule-associated protein RP/EB family member 3, ... 著者 Zhang, R, Nogales, E. 登録日 2015-06-16 公開日 2015-08-12 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Mechanistic Origin of Microtubule Dynamic Instability and Its Modulation by EB Proteins. Cell(Cambridge,Mass.), 162, 2015
8QHD	Hantaan virus polymerase in hexameric state 分子名称: RNA-directed RNA polymerase L 著者 Durieux Trouilleton, Q, Arragain, B, Malet, H. 登録日 2023-09-07 公開日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural characterization of the oligomerization of full-length Hantaan virus polymerase into symmetric dimers and hexamers. Nat Commun, 15, 2024
6ZOV	ENTEROPEPTIDASE IN COMPLEX WITH COMPOUND 6 分子名称: 1,2-ETHANEDIOL, 4-carbamimidamidobenzoic acid, Enteropeptidase, ... 著者 Cummings, M.D. 登録日 2020-07-07 公開日 2020-10-21 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Targeting Enteropeptidase with Reversible Covalent Inhibitors To Achieve Metabolic Benefits. J.Pharmacol.Exp.Ther., 375, 2020
5LKA	Crystal structure of haloalkane dehalogenase LinB 140A+143L+177W+211L mutant (LinB86) from Sphingobium japonicum UT26 at 1.3 A resolution 分子名称: Haloalkane dehalogenase, THIOCYANATE ION 著者 Degtjarik, O, Rezacova, P, Iermak, I, Chaloupkova, R, Damborsky, J, Kuta Smatanova, I. 登録日 2016-07-21 公開日 2016-10-05 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.298 Å) 主引用文献 Engineering a de novo transport tunnel. Acs Catalysis, 2016
5LHF	Phosphoribosyl anthranilate isomerase from Thermococcus kodakaraensis 分子名称: CHLORIDE ION, N-(5'-phosphoribosyl)anthranilate isomerase, SODIUM ION 著者 Perveen, S, Rashid, N, Papageorgiou, A.C. 登録日 2016-07-11 公開日 2016-11-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of a phosphoribosyl anthranilate isomerase from the hyperthermophilic archaeon Thermococcus kodakaraensis. Acta Crystallogr F Struct Biol Commun, 72, 2016

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