Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1TMU
DownloadVisualize
BU of 1tmu by Molmil
Changes in interactions in complexes of hirudin derivatives and human alpha-thrombin due to different crystal forms
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Hirudin variant-2, ...
著者Priestle, J.P, Gruetter, M.G.
登録日1994-05-26
公開日1994-09-30
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Changes in interactions in complexes of hirudin derivatives and human alpha-thrombin due to different crystal forms.
Protein Sci., 2, 1993
1TQ7
DownloadVisualize
BU of 1tq7 by Molmil
Crystal structure of the anticoagulant thrombin mutant W215A/E217A bound to PPACK
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Prothrombin, ...
著者Pineda, A.O, Chen, Z.-W, Caccia, S, Savvides, S.N, Waksman, G, Mathews, F.S, Di Cera, E.
登録日2004-06-16
公開日2004-08-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The anticoagulant thrombin mutant W215A/E217A has a collapsed primary specificity pocket
J.Biol.Chem., 279, 2004
1T32
DownloadVisualize
BU of 1t32 by Molmil
A Dual Inhibitor of the Leukocyte Proteases Cathepsin G and Chymase with Therapeutic Efficacy in Animals Models of Inflammation
分子名称: 2-[3-({METHYL[1-(2-NAPHTHOYL)PIPERIDIN-4-YL]AMINO}CARBONYL)-2-NAPHTHYL]-1-(1-NAPHTHYL)-2-OXOETHYLPHOSPHONIC ACID, Cathepsin G, SULFATE ION
著者de Garavilla, L, Greco, M.N, Giardino, E.C, Wells, G.I, Haertlein, B.J, Kauffman, J.A, Corcoran, T.W, Derian, C.K, Eckardt, A.J, Abraham, W.M, Sukumar, N, Chen, Z, Pineda, A.O, Mathews, F.S, Di Cera, E, Andrade-Gordon, P, Damiano, B.P, Maryanoff, B.E.
登録日2004-04-23
公開日2005-03-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A novel, potent dual inhibitor of the leukocyte proteases cathepsin G and chymase: molecular mechanisms and anti-inflammatory activity in vivo.
J.Biol.Chem., 280, 2005
1T4V
DownloadVisualize
BU of 1t4v by Molmil
Crystal Structure Analysis of a novel Oxyguanidine bound to Thrombin
分子名称: Hirudin IIIA, N-ALLYL-5-AMIDINOAMINOOXY-PROPYLOXY-3-CHLORO-N-CYCLOPENTYLBENZAMIDE, Prothrombin
著者Spurlino, J.
登録日2004-04-30
公開日2005-03-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Oxyguanidines. Part 2: Discovery of a novel orally active thrombin inhibitor through structure-based drug design and parallel synthesis
BIOORG.MED.CHEM.LETT., 14, 2004
1TWX
DownloadVisualize
BU of 1twx by Molmil
Crystal structure of the thrombin mutant D221A/D222K
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hirudin, Prothrombin
著者Pineda, A.O, Zhang, E, Guinto, E.R, Savvides, S.N, Tulinsky, A, Di Cera, E.
登録日2004-07-01
公開日2005-04-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the thrombin mutant D221A/D222K: the Asp222:Arg187 ion-pair stabilizes the fast form
Biophys.Chem., 112, 2004
1ELT
DownloadVisualize
BU of 1elt by Molmil
STRUCTURE OF NATIVE PANCREATIC ELASTASE FROM NORTH ATLANTIC SALMON AT 1.61 ANGSTROMS RESOLUTION
分子名称: CALCIUM ION, ELASTASE
著者Berglund, G.I, Smalaas, A.O.
登録日1995-01-02
公開日1996-01-01
最終更新日2018-04-18
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structure of native pancreatic elastase from North Atlantic salmon at 1.61 A resolution.
Acta Crystallogr.,Sect.D, 51, 1995
1UIJ
DownloadVisualize
BU of 1uij by Molmil
Crystal Structure Of Soybean beta-Conglycinin Beta Homotrimer (I122M/K124W)
分子名称: beta subunit of beta conglycinin
著者Maruyama, N, Maruyama, Y, Tsuruki, T, Okuda, E, Yoshikawa, M, Utsumi, S.
登録日2003-07-16
公開日2004-07-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Creation of soybean beta-conglycinin beta with strong phagocytosis-stimulating activity
BIOCHIM.BIOPHYS.ACTA, 1648, 2003
7QTZ
DownloadVisualize
BU of 7qtz by Molmil
Crystal structure of Iripin-1 serpin from tick Ixodes ricinus
分子名称: MAGNESIUM ION, Putative salivary serpin
著者Kascakova, B, Kuta Smatanova, I, Chmelar, J, Prudnikova, T.
登録日2022-01-17
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Iripin-1, a new anti-inflammatory tick serpin, inhibits leukocyte recruitment in vivo while altering the levels of chemokines and adhesion molecules.
Front Immunol, 14, 2023
6KZF
DownloadVisualize
BU of 6kzf by Molmil
Racemic X-ray Structure of Calcicludine
分子名称: D-calcicludine, Kunitz-type serine protease inhibitor homolog calcicludine
著者Qu, Q, Gao, S, Liu, L.
登録日2019-09-24
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Synthesis of Disulfide Surrogate Peptides Incorporating Large-Span Surrogate Bridges Through a Native-Chemical-Ligation-Assisted Diaminodiacid Strategy
Angew.Chem.Int.Ed.Engl., 59, 2020
6LH6
DownloadVisualize
BU of 6lh6 by Molmil
Crystal structure of a double headed Bowman-birk protease inhibitor protein from chickpea.
分子名称: Bowman-Birk type proteinase inhibitor-like
著者Sharma, U, Suresh, C.G.
登録日2019-12-06
公開日2020-02-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of a double headed Bowman-birk protease inhibitor protein from chickpea.
To Be Published
6FJ4
DownloadVisualize
BU of 6fj4 by Molmil
Structure of FAE solved by SAD from data collected at the peak of the Selenium absorption edge on ID30B
分子名称: CADMIUM ION, Endo-1,4-beta-xylanase Y, GLYCEROL, ...
著者McCarthy, A.A, Mueller-Dieckmann, C.
登録日2018-01-19
公開日2018-02-07
最終更新日2018-08-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF.
J Synchrotron Radiat, 25, 2018
6MGP
DownloadVisualize
BU of 6mgp by Molmil
Structure of human 4-1BB / 4-1BBL complex
分子名称: ACETATE ION, GLYCEROL, Tumor necrosis factor ligand superfamily member 9, ...
著者Kimberlin, C.R, Chin, S.M, Roe-Zurz, Z, Xu, A, Yang, Y.
登録日2018-09-14
公開日2018-11-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structure of the 4-1BB/4-1BBL complex and distinct binding and functional properties of utomilumab and urelumab
Nat Commun, 9, 2018
6GIW
DownloadVisualize
BU of 6giw by Molmil
Water-soluble Chlorophyll Protein (WSCP) from Lepidium virginicum (Mutation L91P) with Chlorophyll-a
分子名称: CHLOROPHYLL A, Water-soluble chlorophyll protein
著者Palm, D.M, Agostini, A, Averesch, V, Girr, P, Werwie, M, Takahashi, S, Satoh, H, Jaenicke, E, Paulsen, H.
登録日2018-05-15
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Chlorophyll a/b binding-specificity in water-soluble chlorophyll protein.
Nat Plants, 4, 2018
6GIX
DownloadVisualize
BU of 6gix by Molmil
Water-soluble Chlorophyll Protein (WSCP) from Lepidium virginicum (Mutation L91P) with Chlorophyll-b
分子名称: CHLOROPHYLL B, Water-soluble chlorophyll protein
著者Palm, D.M, Agostini, A, Averesch, V, Girr, P, Werwie, M, Takahashi, S, Satoh, H, Jaenicke, E, Paulsen, H.
登録日2018-05-15
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Chlorophyll a/b binding-specificity in water-soluble chlorophyll protein.
Nat Plants, 4, 2018
6NAV
DownloadVisualize
BU of 6nav by Molmil
Cryo-EM reconstruction of Sulfolobus islandicus LAL14/1 Pilus
分子名称: M9UD72
著者Wang, F, Cvirkaite-Krupovic, V, Prangishvili, D, Krupovic, M, Egelman, E.H.
登録日2018-12-06
公開日2019-05-08
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献An extensively glycosylated archaeal pilus survives extreme conditions.
Nat Microbiol, 4, 2019
6N29
DownloadVisualize
BU of 6n29 by Molmil
Crystal structure of monomeric von Willebrand Factor D`D3 assembly
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Dong, X, Arndt, J.W, Springer, T.A.
登録日2018-11-12
公開日2019-01-23
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The von Willebrand factor D'D3 assembly and structural principles for factor VIII binding and concatemer biogenesis.
Blood, 133, 2019
6NOX
DownloadVisualize
BU of 6nox by Molmil
Solution structure of SFTI-KLK5 inhibitor
分子名称: SFTI-KLK5 Peptide
著者White, A.M.
登録日2019-01-16
公開日2019-04-03
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Amino Acid Scanning at P5' within the Bowman-Birk Inhibitory Loop Reveals Specificity Trends for Diverse Serine Proteases.
J. Med. Chem., 62, 2019
3MG6
DownloadVisualize
BU of 3mg6 by Molmil
Structure of yeast 20S open-gate proteasome with Compound 6
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, N~2~-{[(1S)-6-methoxy-3-oxo-2,3-dihydro-1H-inden-1-yl]acetyl}-N-{(1S)-1-[(4-methylbenzyl)carbamoyl]-3-phenylpropyl}-L-threoninamide, ...
著者Sintchak, M.D.
登録日2010-04-05
公開日2011-05-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Characterization of a new series of non-covalent proteasome inhibitors with exquisite potency and selectivity for the 20S beta5-subunit.
Biochem.J., 430, 2010
3MG4
DownloadVisualize
BU of 3mg4 by Molmil
Structure of yeast 20S proteasome with Compound 1
分子名称: (2S)-2-amino-N-[(1S)-1-({(1S)-1-[(4-methylbenzyl)carbamoyl]-3-phenylpropyl}carbamoyl)-3-phenylpropyl]-4-phenylbutanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, ...
著者Sintchak, M.D.
登録日2010-04-05
公開日2011-04-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Characterization of a new series of non-covalent proteasome inhibitors with exquisite potency and selectivity for the 20S beta5-subunit.
Biochem.J., 430, 2010
3MG8
DownloadVisualize
BU of 3mg8 by Molmil
Structure of yeast 20S open-gate proteasome with Compound 16
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, N-(2,2-dimethylpropyl)-N~2~-[1H-indol-3-yl(oxo)acetyl]-L-asparaginyl-N-(2-methylbenzyl)-3-pyridin-4-yl-L-alaninamide, ...
著者Sintchak, M.D.
登録日2010-04-05
公開日2011-05-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Characterization of a new series of non-covalent proteasome inhibitors with exquisite potency and selectivity for the 20S beta5-subunit.
Biochem.J., 430, 2010
2J15
DownloadVisualize
BU of 2j15 by Molmil
Cyclic MrIA: An exceptionally stable and potent cyclic conotoxin with a novel topological fold that targets the norepinephrine transporter.
分子名称: MAI126P
著者Lovelace, E.S, Armishaw, C.J, Colgrave, M.L, Walstrom, M.E, Alewood, P.F, Daly, N.L, Craik, D.J.
登録日2006-08-09
公開日2006-11-01
最終更新日2018-05-09
実験手法SOLUTION NMR
主引用文献Cyclic MrIA: a stable and potent cyclic conotoxin with a novel topological fold that targets the norepinephrine transporter.
J. Med. Chem., 49, 2006
3MG7
DownloadVisualize
BU of 3mg7 by Molmil
Structure of yeast 20S open-gate proteasome with Compound 8
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(benzyloxy)-N-[(1S,2R)-2-hydroxy-1-({(1S)-1-[(2-methylbenzyl)carbamoyl]-3-phenylpropyl}carbamoyl)propyl]benzamide, MAGNESIUM ION, ...
著者Sintchak, M.D.
登録日2010-04-05
公開日2011-05-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Characterization of a new series of non-covalent proteasome inhibitors with exquisite potency and selectivity for the 20S beta5-subunit.
Biochem.J., 430, 2010
3MG0
DownloadVisualize
BU of 3mg0 by Molmil
Structure of yeast 20S proteasome with bortezomib
分子名称: N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, Proteasome component C1, Proteasome component C11, ...
著者Sintchak, M.D.
登録日2010-04-05
公開日2011-05-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Characterization of a new series of non-covalent proteasome inhibitors with exquisite potency and selectivity for the 20S beta5-subunit.
Biochem.J., 430, 2010
6UFO
DownloadVisualize
BU of 6ufo by Molmil
Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with 7-[(3-aminopropyl)amino]-1-methoxyheptan-2-one
分子名称: 7-[(3-aminopropyl)amino]-1-methoxyheptane-2,2-diol, PHOSPHATE ION, POTASSIUM ION, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2019-09-24
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Binding ofN8-Acetylspermidine Analogues to Histone Deacetylase 10 Reveals Molecular Strategies for Blocking Polyamine Deacetylation.
Biochemistry, 58, 2019
6UIL
DownloadVisualize
BU of 6uil by Molmil
Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with 7-[(3-aminopropyl)amino]-1,1,1-trifluoroheptan-2-one
分子名称: 7-[(3-aminopropyl)amino]-1,1,1-trifluoroheptane-2,2-diol, PHOSPHATE ION, POTASSIUM ION, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2019-10-01
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Binding ofN8-Acetylspermidine Analogues to Histone Deacetylase 10 Reveals Molecular Strategies for Blocking Polyamine Deacetylation.
Biochemistry, 58, 2019

225681

件を2024-10-02に公開中

PDB statisticsPDBj update infoContact PDBjnumon