PDB: 316 件ウェブページステータス検索Chemie searchBIRD

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2D5D	Structure of Biotin Carboxyl Carrier Protein (74Val start) from Pyrococcus horikoshi OT3 Ligand Free Form II 分子名称: methylmalonyl-CoA decarboxylase gamma chain 著者 Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-11-01 公開日 2006-05-01 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate J.Biol.Chem., 283, 2008
2E4F	Crystal Structure of the Cytoplasmic Domain of G-Protein-Gated Inward Rectifier Potassium Channel Kir3.2 分子名称: G protein-activated inward rectifier potassium channel 2 著者 Inanobe, A, Kurachi, Y. 登録日 2006-12-06 公開日 2007-06-12 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.302 Å) 主引用文献 Structural Diversity in the Cytoplasmic Region of G Protein-Gated Inward Rectifier K+ Channels CHANNELS, 1, 2007
2E8I	Structure of 6-aminohexanoate-dimer hydrolase, D1 mutant 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-aminohexanoate-dimer hydrolase, GLYCEROL, ... 著者 Shibata, N, Higuchi, Y, Negoro, S. 登録日 2007-01-20 公開日 2008-01-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Molecular design of a nylon-6 byproduct-degrading enzyme from a carboxylesterase with a beta-lactamase fold. Febs J., 276, 2009
2ENI	Mutant F197M structure of PH0725 from Pyrococcus horikoshii OT3 分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase 著者 Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-03-28 公開日 2007-10-02 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Mutant F197M structure of PH0725 from Pyrococcus horikoshii OT3 To be Published
4FXC	TERTIARY STRUCTURE OF [2FE-2S] FERREDOXIN FROM SPIRULINA PLATENSIS REFINED AT 2.5 ANGSTROMS RESOLUTION: STRUCTURAL COMPARISONS OF PLANT-TYPE FERREDOXINS AND AN ELECTROSTATIC POTENTIAL ANALYSIS 分子名称: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN 著者 Fukuyama, K, Tsukihara, T. 登録日 1995-04-25 公開日 1995-12-07 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Tertiary structure of [2Fe-2S] ferredoxin from Spirulina platensis refined at 2.5 A resolution: structural comparisons of plant-type ferredoxins and an electrostatic potential analysis. J.Biochem.(Tokyo), 117, 1995
3LG8	Crystal structure of the C-terminal part of subunit E (E101-206) from Methanocaldococcus jannaschii of A1AO ATP synthase 分子名称: A-type ATP synthase subunit E 著者 Balakrishna, A.M, Manimekalai, M.S.S, Hunke, C, Gayen, S, Jeyakanthan, J, Gruber, G. 登録日 2010-01-19 公開日 2010-07-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (4.1 Å) 主引用文献 Crystal and solution structure of the C-terminal part of the Methanocaldococcus jannaschii A1AO ATP synthase subunit E revealed by X-ray diffraction and small-angle X-ray scattering J.Bioenerg.Biomembr., 42, 2010
3W0T	Human Glyoxalase I with an N-hydroxypyridone derivative inhibitor 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lactoylglutathione lyase, N-[3-(1-hydroxy-6-oxo-4-phenyl-1,6-dihydropyridin-2-yl)phenyl]methanesulfonamide, ... 著者 Fukami, T.A, Irie, M, Matsuura, T. 登録日 2012-11-02 公開日 2013-11-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.351 Å) 主引用文献 N-Hydroxypyridone-based glyoxalase I inhibitors mimicking binding interactions of the substrate To be Published
1CYG	CYCLODEXTRIN GLUCANOTRANSFERASE (E.C.2.4.1.19) (CGTASE) 分子名称: CALCIUM ION, CYCLODEXTRIN GLUCANOTRANSFERASE 著者 Kubota, M, Matsuura, Y, Sakai, S, Katsube, Y. 登録日 1993-02-03 公開日 1995-02-27 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献
4DT0	The structure of the peripheral stalk subunit E from Pyrococcus horikoshii 分子名称: V-type ATP synthase subunit E 著者 Balakrishna, A.M, Gruber, G. 登録日 2012-02-20 公開日 2012-05-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 The structure of subunit E of the Pyrococcus horikoshii OT3 A-ATP synthase gives insight into the elasticity of the peripheral stalk. J.Mol.Biol., 420, 2012
1FXI	STRUCTURE OF THE [2FE-2S] FERREDOXIN I FROM THE BLUE-GREEN ALGA APHANOTHECE SACRUM AT 2.2 ANGSTROMS RESOLUTION 分子名称: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN I 著者 Tsukihara, T. 登録日 1990-08-28 公開日 1991-10-15 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of the [2Fe-2S] ferredoxin I from the blue-green alga Aphanothece sacrum at 2.2 A resolution. J.Mol.Biol., 216, 1990
5JGB	Crystal structure of human TAK1/TAB1 fusion protein in complex with ligand 10 分子名称: N-(2-methoxy-4-{[3-(4-methylpiperazin-1-yl)propyl]carbamoyl}phenyl)-4-oxo-3,4-dihydrothieno[3,2-d]pyrimidine-7-carboxamide, TAK1 kinase - TAB1 chimera fusion protein 著者 Irie, M, Nakamura, M, Fukami, T.A, Matsuura, T, Morishima, K. 登録日 2016-04-20 公開日 2016-07-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Discovery of a potent and highly selective transforming growth factor beta receptor-associated kinase 1 (TAK1) inhibitor by structure based drug design (SBDD) Bioorg.Med.Chem., 24, 2016
5JGA	Crystal structure of human TAK1/TAB1 fusion protein in complex with ligand 11c 分子名称: N-[5-(4-methylpiperazine-1-carbonyl)[1,1'-biphenyl]-2-yl]-4-oxo-3,4-dihydrothieno[3,2-d]pyrimidine-7-carboxamide, TAK1 kinase - TAB1 chimera fusion protein 著者 Irie, M, Nakamura, M, Fukami, T.A, Matsuura, T, Morishima, K. 登録日 2016-04-19 公開日 2016-07-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Discovery of a potent and highly selective transforming growth factor beta receptor-associated kinase 1 (TAK1) inhibitor by structure based drug design (SBDD) Bioorg.Med.Chem., 24, 2016
5JGD	Crystal structure of human TAK1/TAB1 fusion protein in complex with ligand 12 分子名称: N-(2-isopropoxy-3-(4-methylpiperazine-1-carbonyl)phenyl)-4-oxo-3,4-dihydrothieno[3,2-d]pyrimidine-7-carboxamide, TAK1 kinase - TAB1 chimera fusion protein 著者 Irie, M, Nakamura, M, Fukami, T.A, Matsuura, T, Morishima, K. 登録日 2016-04-20 公開日 2016-07-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.101 Å) 主引用文献 Discovery of a potent and highly selective transforming growth factor beta receptor-associated kinase 1 (TAK1) inhibitor by structure based drug design (SBDD) Bioorg.Med.Chem., 24, 2016
5GJF	Crystal structure of human TAK1/TAB1 fusion protein in complex with ligand 3 分子名称: N-(2-isopropoxy-4-(4-methylpiperazine-1-carbonyl)phenyl)-2-(3-(3-phenylureido)phenyl)thiazole-4-carboxamide, TAK1 kinase - TAB1 chimera fusion protein 著者 Irie, M, Nakamura, M, Fukami, T.A, Matsuura, T, Morishima, K. 登録日 2016-06-29 公開日 2016-11-16 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Development of a Method for Converting a TAK1 Type I Inhibitor into a Type II or c-Helix-Out Inhibitor by Structure-Based Drug Design (SBDD) Chem.Pharm.Bull., 64, 2016
5GJG	Crystal structure of human TAK1/TAB1 fusion protein in complex with ligand 4 分子名称: N-(2-isopropoxy-4-(4-methylpiperazine-1-carbonyl)phenyl)-2-(3-(phenylcarbamoyl)phenyl)thiazole-4-carboxamide, TAK1 kinase - TAB1 chimera fusion protein 著者 Irie, M, Nakamura, M, Fukami, T.A, Matsuura, T, Morishima, K. 登録日 2016-06-29 公開日 2016-11-16 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Development of a Method for Converting a TAK1 Type I Inhibitor into a Type II or c-Helix-Out Inhibitor by Structure-Based Drug Design (SBDD) Chem.Pharm.Bull., 64, 2016
5GJD	Crystal structure of human TAK1/TAB1 fusion protein in complex with ligand 2 分子名称: 1-(4-((1H-pyrrolo[2,3-b]pyridin-4-yl)oxy)phenyl)-3-(5-(4-methylpiperazin-1-yl)naphthalen-2-yl)urea, TAK1 kinase - TAB1 chimera fusion protein 著者 Irie, M, Nakamura, M, Fukami, T.A, Matsuura, T, Morishima, K. 登録日 2016-06-29 公開日 2016-11-16 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Development of a Method for Converting a TAK1 Type I Inhibitor into a Type II or c-Helix-Out Inhibitor by Structure-Based Drug Design (SBDD) Chem.Pharm.Bull., 64, 2016
1C53	S-CLASS CYTOCHROMES C HAVE A VARIETY OF FOLDING PATTERNS: STRUCTURE OF CYTOCHROME C-553 FROM DESULFOVIBRIO VULGARIS DETERMINED BY THE MULTI-WAVELENGTH ANOMALOUS DISPERSION METHOD 分子名称: CYTOCHROME C553, PROTOPORPHYRIN IX CONTAINING FE 著者 Nakagawa, A, Higuchi, Y, Yasuoka, N, Katsube, Y, Yaga, T. 登録日 1991-08-26 公開日 1993-10-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 S-class cytochromes c have a variety of folding patterns: structure of cytochrome c-553 from Desulfovibrio vulgaris determined by the multi-wavelength anomalous dispersion method. J.Biochem.(Tokyo), 108, 1990
1CO6	CRYSTAL STRUCTURE OF FERROCYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS 分子名称: HEME C, PROTEIN (CYTOCHROME C2) 著者 Miki, K, Sogabe, S. 登録日 1999-06-05 公開日 1999-06-18 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Refined crystal structure of ferrocytochrome c2 from Rhodopseudomonas viridis at 1.6 A resolution. J.Mol.Biol., 252, 1995
3VW9	Human Glyoxalase I with an N-hydroxypyridone inhibitor 分子名称: 1-hydroxy-6-[1-(3-methoxypropyl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-4-phenylpyridin-2(1H)-one, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lactoylglutathione lyase, ... 著者 Fukami, T.A, Irie, M, Matsuura, T. 登録日 2012-08-10 公開日 2012-12-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Design and evaluation of azaindole-substituted N-hydroxypyridones as glyoxalase I inhibitors Bioorg.Med.Chem.Lett., 22, 2012
3W0U	human Glyoxalase I with an N-hydroxypyridone inhibitor 分子名称: Lactoylglutathione lyase, N-[3-(1-Hydroxy-6-oxo-4-phenyl-1,6-dihydro-pyridin-2-yl)-5-methanesulfonylamino-phenyl]-methanesulfonamide, ZINC ION 著者 Fukami, T.A, Irie, M, Matsuura, T. 登録日 2012-11-02 公開日 2013-11-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 N-Hydroxypyridone-based glyoxalase I inhibitors mimicking binding interactions of the substrate to be published
3A4P	human c-MET kinase domain complexed with 6-benzyloxyquinoline inhibitor 分子名称: (2E)-3-{6-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]quinolin-3-yl}-N-methylprop-2-enamide, CHLORIDE ION, Hepatocyte growth factor receptor, ... 著者 Fukami, T.A, Kadono, S, Yamamuro, M, Matsuura, T. 登録日 2009-07-13 公開日 2010-02-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 Discovery of 6-benzyloxyquinolines as c-Met selective kinase inhibitors Bioorg.Med.Chem.Lett., 20, 2010
2P6I	Crystal structure of PH0725 from Pyrococcus horikoshii OT3 分子名称: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase 著者 Yamamoto, H, Matsuura, Y, Morikawa, Y, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-03-18 公開日 2007-09-18 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of PH0725 from Pyrococcus horikoshii OT3 To be Published
2PCM	Crystal structure of PH0725 from Pyrococcus horikoshii OT3 分子名称: DIPHTHINE SYNTHASE, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE 著者 Yamamoto, H, Taketa, M, Tanaka, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-03-30 公開日 2007-10-02 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of PH0725 from Pyrococcus horikoshii OT3 To be Published
2P6K	Crystal structure of PH0725 from Pyrococcus horikoshii OT3 分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, diphthine synthase 著者 Yamamoto, H, Matsuura, Y, Ono, N, Nakamoto, T, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-03-18 公開日 2007-09-18 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of PH0725 from Pyrococcus horikoshii OT3 To be Published
2PB4	Crystal structure of PH0725 from Pyrococcus horikoshii OT3 分子名称: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase 著者 Yamamoto, H, Taketa, M, Kageyama, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-03-28 公開日 2007-10-02 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

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