PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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5JQX	Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with phosphoglyceric acid (PGA) - GpgS*PGA 分子名称: 3-PHOSPHOGLYCERIC ACID, Glucosyl-3-phosphoglycerate synthase 著者 Albesa-Jove, D, Sancho-Vaello, E, Rodrigo-Unzueta, A, Comino, N, Carreras-Gonzalez, A, Arrasate, P, Urresti, S, Guerin, M.E. 登録日 2016-05-05 公開日 2017-05-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.82 Å) 主引用文献 Structural Snapshots and Loop Dynamics along the Catalytic Cycle of Glycosyltransferase GpgS. Structure, 25, 2017
7DKT	Crystal structure of TxGH116 E441A nucleophile mutant from Thermoanaerobacterium xylanolyticum with alpha-glucosyl fluoride 分子名称: CALCIUM ION, GLYCEROL, alpha-D-glucopyranosyl fluoride, ... 著者 Pengthaisong, S, Ketudat Cairns, J.R. 登録日 2020-11-25 公開日 2021-06-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural basis for transglycosylation in glycoside hydrolase family GH116 glycosynthases. Arch.Biochem.Biophys., 706, 2021
2LA5	RNA Duplex-Quadruplex Junction Complex with FMRP RGG peptide 分子名称: Fragile X mental retardation 1 protein, RNA (36-MER) 著者 Phan, A, Kuryavyi, V, Darnell, J, Serganov, A, Majumdar, A, Ilin, S, Darnell, R, Patel, D. 登録日 2011-03-03 公開日 2011-06-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction. Nat.Struct.Mol.Biol., 18, 2011
8P6J	Structure of the hypervariable region of Streptococcus pyogenes M3 protein in complex with a collagen peptide 分子名称: Antiphagocytic M protein, type 3, collagen II-27 Toolkit peptide (JDM238) 著者 Wojnowska, M, Schwarz-Linek, U. 登録日 2023-05-26 公開日 2023-06-21 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.324 Å) 主引用文献 Structural basis for collagen recognition by the Streptococcus pyogenes M3 protein To Be Published
7SFA	Branchiostoma floridae fluorescent protein LanFP10A2 分子名称: Fluorescent protein lanFP10A2 著者 Pletnev, S, Pletneva, N, Pletnev, V.Z, Muslinkina, L. 登録日 2021-10-03 公開日 2022-03-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins. Protein Sci., 31, 2022
2Y72	Crystal structure of the PKD Domain of Collagenase G from Clostridium Histolyticum at 1.18 Angstrom Resolution. 分子名称: COLLAGENASE 著者 Eckhard, U, Brandstetter, H. 登録日 2011-01-27 公開日 2011-09-28 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 Structure of Collagenase G Reveals a Chew-and -Digest Mechanism of Bacterial Collagenolysis Nat.Struct.Mol.Biol., 18, 2011
3HAD	BIOCHEMICAL CHARACTERIZATION AND STRUCTURE DETERMINATION OF HUMAN HEART SHORT CHAIN L-3-HYDROXYACYL COA DEHYDROGENASE PROVIDE INSIGHT INTO CATALYTIC MECHANISM 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (L-3-HYDROXYACYL COA DEHYDROGENASE) 著者 Barycki, J.J, Bratt, J.M, Banaszak, L.J. 登録日 1998-12-03 公開日 2000-01-12 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Biochemical characterization and crystal structure determination of human heart short chain L-3-hydroxyacyl-CoA dehydrogenase provide insights into catalytic mechanism. Biochemistry, 38, 1999
7SFD	Human DNMT1(729-1600) Bound to Zebularine-Containing 12mer dsDNA and Inhibitor GSK3543105A 分子名称: (2S)-2-({3,5-dicyano-4-ethyl-6-[4-(2-hydroxyethyl)-1,4-diazepan-1-yl]pyridin-2-yl}sulfanyl)-2-phenylacetamide, 1,2-ETHANEDIOL, DNA (12-MER), ... 著者 Horton, J.R, Pathuri, S, Cheng, X. 登録日 2021-10-03 公開日 2022-03-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Structural characterization of dicyanopyridine containing DNMT1-selective, non-nucleoside inhibitors. Structure, 30, 2022
2YU2	Crystal structure of hJHDM1A without a-ketoglutarate 分子名称: FE (II) ION, JmjC domain-containing histone demethylation protein 1A 著者 Han, Z. 登録日 2007-04-05 公開日 2007-04-24 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural basis for histone demethylation by JHDM1 To be Published
2LB4	DNA / RNA Hybrid containing a central stereo specific Sp borano phosphate linkage 分子名称: DNA_(5'-D(*AP*TP*GP*GP*TP*BGR*CP*TP*C)-3')_, RNA_(5'-R(*GP*AP*GP*CP*AP*CP*CP*AP*U)-3')_ 著者 Johnson, C.N, Spring, A.M, Shaw, B.R, Germann, M.W. 登録日 2011-03-22 公開日 2011-06-29 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural Basis of the RNase H1 Activity on Stereo Regular Borano Phosphonate DNA/RNA Hybrids. Biochemistry, 50, 2011
7SFF	Human DNMT1(729-1600) Bound to Zebularine-Containing 12mer dsDNA and Inhibitor GSK3852279B 分子名称: (2R)-2-{[6-(4-aminopiperidin-1-yl)-3,5-dicyano-4-ethylpyridin-2-yl]sulfanyl}-2-[4-(trifluoromethyl)phenyl]acetamide, 1,2-ETHANEDIOL, DNA (12-MER), ... 著者 Horton, J.R, Pathuri, S, Cheng, X. 登録日 2021-10-03 公開日 2022-03-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural characterization of dicyanopyridine containing DNMT1-selective, non-nucleoside inhibitors. Structure, 30, 2022
7P81	Crystal structure of ClpP from Bacillus subtilis in complex with ADEP2 (compact state) 分子名称: ADEP2, ATP-dependent Clp protease proteolytic subunit 著者 Lee, B.-G, Kim, L, Kim, M.K, Kwon, D.H, Song, H.K. 登録日 2021-07-21 公開日 2022-06-29 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
2LCS	Yeast Nbp2p SH3 domain in complex with a peptide from Ste20p 分子名称: NAP1-binding protein 2, Serine/threonine-protein kinase STE20 著者 Gorelik, M, Davidson, A.R. 登録日 2011-05-07 公開日 2012-02-01 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Distinct Peptide Binding Specificities of Src Homology 3 (SH3) Protein Domains Can Be Determined by Modulation of Local Energetics across the Binding Interface. J.Biol.Chem., 287, 2012
2LJ9	Partial 3d structure of the c-terminal part of the free arabidopsis thaliana cp12-2 in its oxidized form 分子名称: CP12 domain-containing protein 2 著者 Trivelli, X, Sparla, F, Marri, L, Trost, P. 登録日 2011-09-09 公開日 2012-04-25 最終更新日 2012-06-27 実験手法 SOLUTION NMR 主引用文献 Conformational Selection and Folding-upon-binding of Intrinsically Disordered Protein CP12 Regulate Photosynthetic Enzymes Assembly. J.Biol.Chem., 287, 2012
7SFC	Human DNMT1(729-1600) Bound to Zebularine-Containing 12mer dsDNA and Inhibitor GSK3735967A 分子名称: 1,2-ETHANEDIOL, DNA (12-MER), DNA (cytosine-5)-methyltransferase 1, ... 著者 Horton, J.R, Pathuri, S, Cheng, X. 登録日 2021-10-03 公開日 2022-03-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Structural characterization of dicyanopyridine containing DNMT1-selective, non-nucleoside inhibitors. Structure, 30, 2022
2LKK	Human L-FABP in complex with oleate 分子名称: Fatty acid-binding protein, liver, OLEIC ACID 著者 Cai, J, Luecke, C, Chen, Z, Qiao, Y, Klimtchuk, E.S, Hamilton, J.A. 登録日 2011-10-13 公開日 2012-06-20 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure and backbone dynamics of human liver fatty acid binding protein: fatty acid binding revisited. Biophys.J., 102, 2012
7RW8	AP2 bound to heparin in the closed conformation 分子名称: AP-2 complex subunit alpha-2, AP-2 complex subunit beta, AP-2 complex subunit mu, ... 著者 Baker, R.W, Hollopeter, G, Partlow, E.A. 登録日 2021-08-19 公開日 2022-03-30 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of an endocytic checkpoint that primes the AP2 clathrin adaptor for cargo internalization. Nat.Struct.Mol.Biol., 29, 2022
7DDA	Envelope protein VP37 a crystal structure from White Spot Syndrome Virus 分子名称: Envelope protein, SULFATE ION 著者 Somsoros, W, Sangawa, T, Takebe, K, Attarataya, J, Suzuki, M, Khunrae, P. 登録日 2020-10-28 公開日 2021-06-23 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Crystal structure of the C-terminal domain of envelope protein VP37 from white spot syndrome virus reveals sulphate binding sites responsible for heparin binding. J.Gen.Virol., 102, 2021
2LM0	Solution structure of the AF4-AF9 complex 分子名称: AF4/FMR2 family member 1/Protein AF-9 chimera 著者 Leach, B.I, Kuntimaddi, A, Schmidt, C.R, Cierpicki, T, Johnson, S.A, Bushweller, J.H. 登録日 2011-11-18 公開日 2013-01-09 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Leukemia Fusion Target AF9 Is an Intrinsically Disordered Transcriptional Regulator that Recruits Multiple Partners via Coupled Folding and Binding. Structure, 21, 2013
6ZZT	Structure of the borneol dehydrogenases of Salvia rosmarinus (high salt condition) 分子名称: BORNEOL DEHYDROGENASE, CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Dimos, N, Helmer, C.P.O, Loll, B. 登録日 2020-08-05 公開日 2021-02-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A Structural View on the Stereospecificity of Plant Borneol-Type Dehydrogenases. Chemcatchem, 13, 2021
2G6O	Structure of bovine eNOS heme domain (BH4-free) complexed with CO 分子名称: ACETATE ION, ARGININE, CACODYLATE ION, ... 著者 Li, H, Igarashi, J, Jamal, J, Yang, W, Poulos, T.L. 登録日 2006-02-24 公開日 2006-08-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural studies of constitutive nitric oxide synthases with diatomic ligands bound. J.Biol.Inorg.Chem., 11, 2006
2YBK	JMJD2A COMPLEXED WITH R-2-HYDROXYGLUTARATE 分子名称: (2R)-2-hydroxypentanedioic acid, CHLORIDE ION, LYSINE-SPECIFIC DEMETHYLASE 4A, ... 著者 Chowdhury, R, McDonough, M.A, Schofield, C.J. 登録日 2011-03-08 公開日 2011-04-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases. EMBO Rep., 12, 2011
2LMD	Minimal Constraints Solution NMR Structure of Prospero Homeobox protein 1 from Homo sapiens, Northeast Structural Genomics Consortium Target HR4660B 分子名称: Prospero homeobox protein 1 著者 Rossi, P, Lange, O.A, Lee, H, Maglaqui, M, Janjua, H, Ciccosanti, C, Zhao, L, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2011-11-29 公開日 2011-12-21 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples. Proc.Natl.Acad.Sci.USA, 109, 2012
2YCL	complete structure of the corrinoid,iron-sulfur protein including the N-terminal domain with a 4Fe-4S cluster 分子名称: CARBON MONOXIDE DEHYDROGENASE CORRINOID/IRON-SULFUR PROTEIN, GAMMA SUBUNIT, CO DEHYDROGENASE/ACETYL-COA SYNTHASE, ... 著者 Goetzl, S, Jeoung, J.H, Hennig, S.E, Dobbek, H. 登録日 2011-03-16 公開日 2011-06-08 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural Basis for Electron and Methyl-Group Transfer in a Methyltransferase System Operating in the Reductive Acetyl-Coa Pathway J.Mol.Biol., 411, 2011
7S05	Cryo-EM structure of human GlcNAc-1-phosphotransferase A2B2 subcomplex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Li, H, Li, H. 登録日 2021-08-30 公開日 2022-03-30 最終更新日 2022-04-27 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of the human GlcNAc-1-phosphotransferase alpha beta subunits reveals regulatory mechanism for lysosomal enzyme glycan phosphorylation. Nat.Struct.Mol.Biol., 29, 2022

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