PDB: 242842 件ウェブページステータス検索Chemie searchBIRD

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7LEB	HIV-1 Protease WT (NL4-3) in Complex with PU2 (LR2-79) 分子名称: Protease, SULFATE ION, diethyl ({4-[(2S,3R)-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl][(2S)-2-methylbutyl]amino}butyl]phenoxy}methyl)phosphonate 著者 Lockbaum, G.J, Rusere, L.N, Henes, M, Kosovrasti, K, Lee, S.K, Spielvogel, E, Nalivaika, E.A, Swanstrom, R, KurtYilmaz, N, Schiffer, C.A, Ali, A. 登録日 2021-01-14 公開日 2022-01-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 HIV-1 Protease Inhibitors with a P1 Phosphonate Modification Maintain Potency against Drug Resistant Variants by Increased van der Waals Contacts with Flaps Residues To Be Published
4F2B	Modulation of S.Aureus Phosphatidylinositol-Specific Phospholipase C Membrane Binding 分子名称: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1-phosphatidylinositol phosphodiesterase 著者 Cheng, J, Goldstein, R, Stec, B, Gershenson, A, Roberts, M.F. 登録日 2012-05-07 公開日 2012-12-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 Competition between Anion Binding and Dimerization Modulates Staphylococcus aureus Phosphatidylinositol-specific Phospholipase C Enzymatic Activity. J.Biol.Chem., 287, 2012
5T3P	Crystal structure of Human Peroxisomal coenzyme A diphosphatase NUDT7 分子名称: 1,2-ETHANEDIOL, Peroxisomal coenzyme A diphosphatase NUDT7 著者 Srikannathasan, V, Nunez, C.A, Tallant, C, Siejka, P, Mathea, S, Kopec, J, Elkins, J.M, Burgess-Brown, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F, Huber, K. 登録日 2016-08-26 公開日 2017-09-13 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Crystal structure of Human Peroxisomal coenzyme A diphosphatase NUDT7 To Be Published
4MCW	Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre 分子名称: 1,2-ETHANEDIOL, FE (III) ION, IMIDAZOLE, ... 著者 Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF) 登録日 2013-08-21 公開日 2014-02-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre. Mol.Microbiol., 91, 2014
2L8U	NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)2 Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1 - UU pair with one hydrogen bond pair 分子名称: RNA (5'-R(*CP*CP*GP*CP*UP*GP*CP*GP*G)-3') 著者 Parkesh, R, Fountain, M.A, Disney, M.D. 登録日 2011-01-25 公開日 2011-02-23 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)(2) Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1. Biochemistry, 50, 2011
2YX8	Crystal structure of the extracellular domain of human RAMP1 分子名称: Receptor activity-modifying protein 1 著者 Kusano, S, Kukimoto-Niino, M, Shirouzu, M, Shindo, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-24 公開日 2008-04-29 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of the human receptor activity-modifying protein 1 extracellular domain. Protein Sci., 17, 2008
3P0T	Crystal structure of an HIT-like protein from mycobacterium paratuberculosis 分子名称: 1,2-ETHANEDIOL, SULFATE ION, Uncharacterized protein 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2010-09-29 公開日 2010-12-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Increasing the structural coverage of tuberculosis drug targets. Tuberculosis (Edinb), 95, 2015
4R1B	Crystal Structure of 3D7 strain Plasmodium falciparum AMA1 分子名称: Apical membrane antigen 1, AMA1 著者 Lim, S.S, Norton, R.S, McGowan, S. 登録日 2014-08-04 公開日 2015-01-14 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure and Dynamics of Apical Membrane Antigen 1 from Plasmodium falciparum FVO. Biochemistry, 53, 2014
3VYC	Crystal structure of unliganded Saccharomyces cerevisiae CRM1 (Xpo1p) 分子名称: Exportin-1 著者 Saito, N, Matsuura, Y. 登録日 2012-09-22 公開日 2012-11-28 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A 2.1- angstrom -resolution crystal structure of unliganded CRM1 reveals the mechanism of autoinhibition J.Mol.Biol., 425, 2013
3W00	Crystal structure of PcrB complexed with G1P and FsPP from bacillus subtilis subap. subtilis str. 168 分子名称: Heptaprenylglyceryl phosphate synthase, PHOSPHATE ION, S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE, ... 著者 Ren, F, Feng, X, Ko, T.P, Huang, C.H, Hu, Y, Chan, H.C, Liu, Y.L, Wang, K, Chen, C.C, Pang, X, He, M, Li, Y, Oldfield, E, Guo, R.T. 登録日 2012-10-17 公開日 2012-12-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Insights into TIM-barrel prenyl transferase mechanisms: crystal structures of PcrB from Bacillus subtilis and Staphylococcus aureus Chembiochem, 14, 2013
4MM1	GGGPS from Methanothermobacter thermautotrophicus 分子名称: Geranylgeranylglyceryl phosphate synthase, SN-GLYCEROL-1-PHOSPHATE, TRIETHYLENE GLYCOL 著者 Rajendran, C, Peterhoff, D, Beer, B, Kumpula, E.P, Kapetaniou, E, Guldan, H, Wierenga, R.K, Sterner, R, Babinger, P. 登録日 2013-09-07 公開日 2014-06-25 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.8004 Å) 主引用文献 A comprehensive analysis of the geranylgeranylglyceryl phosphate synthase enzyme family identifies novel members and reveals mechanisms of substrate specificity and quaternary structure organization. Mol.Microbiol., 92, 2014
4RBL	Crystal structure of Ser/Thr kinase Pim1 in complex with Mitoxantrone derivatives 分子名称: 1,4,5,8-tetrahydroxyanthracene-9,10-dione, Serine/threonine-protein kinase pim-1 著者 Zhang, W, Wan, X, Huang, N. 登録日 2014-09-12 公開日 2015-03-18 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Crystal structure of Ser/Thr kinase Pim1 in complex with Mitoxantrone derivatives To be Published, 2014
4RCR	STRUCTURE OF THE REACTION CENTER FROM RHODOBACTER SPHAEROIDES R-26 AND 2.4.1: PROTEIN-COFACTOR (BACTERIOCHLOROPHYLL, BACTERIOPHEOPHYTIN, AND CAROTENOID) INTERACTIONS 分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ... 著者 Komiya, H, Yeates, T.O, Chirino, A.J, Rees, D.C, Allen, J.P, Feher, G. 登録日 1991-09-09 公開日 1993-10-31 最終更新日 2024-12-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of the reaction center from Rhodobacter sphaeroides R-26 and 2.4.1: protein-cofactor (bacteriochlorophyll, bacteriopheophytin, and carotenoid) interactions. Proc.Natl.Acad.Sci.USA, 85, 1988
258L	AN ADAPTABLE METAL-BINDING SITE ENGINEERED INTO T4 LYSOZYME 分子名称: CHLORIDE ION, LYSOZYME, ZINC ION 著者 Wray, J.W, Baase, W.A, Ostheimer, G.J, Matthews, B.W. 登録日 1999-01-05 公開日 2000-09-11 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Use of a non-rigid region in T4 lysozyme to design an adaptable metal-binding site. Protein Eng., 13, 2000
1T9D	Crystal Structure Of Yeast Acetohydroxyacid Synthase In Complex With A Sulfonylurea Herbicide, Metsulfuron methyl 分子名称: 2,5-DIMETHYL-PYRIMIDIN-4-YLAMINE, Acetolactate synthase, mitochondrial, ... 著者 McCourt, J.A, Pang, S.S, Guddat, L.W, Duggleby, R.G. 登録日 2004-05-16 公開日 2004-12-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Elucidating the specificity of binding of sulfonylurea herbicides to acetohydroxyacid synthase. Biochemistry, 44, 2005
4E7D	E. cloacae MurA in complex with UDP 分子名称: 1,2-ETHANEDIOL, ACETATE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, ... 著者 Zhu, J.-Y, Yang, Y, Schonbrunn, E. 登録日 2012-03-16 公開日 2013-03-20 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Open-close transition of MurA To be Published
3W06	Crystal structure of Arabidopsis thaliana DWARF14 Like (AtD14L) 分子名称: 1,2-ETHANEDIOL, Hydrolase, alpha/beta fold family protein 著者 Kagiyama, M, Hirano, Y, Mori, T, Kim, S.Y, Kyozuka, J, Seto, Y, Yamaguchi, S, Hakoshima, T. 登録日 2012-10-19 公開日 2013-01-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Structures of D14 and D14L in the strigolactone and karrikin signaling pathways Genes Cells, 18, 2013
1ONO	IspC Mn2+ complex 分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, MANGANESE (II) ION 著者 Steinbacher, S, Kaiser, J, Eisenreich, W, Huber, R, Bacher, A, Rohdich, F. 登録日 2003-02-28 公開日 2003-03-18 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of fosmidomycin action revealed by the complex with 2-C-methyl-D-erythritol 4-phosphate synthase (IspC). Implications for the catalytic mechanism and anti-malaria drug development. J.BIOL.CHEM., 278, 2003
4MS2	Structural basis of Ca2+ selectivity of a voltage-gated calcium channel 分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Ion transport protein 著者 Tang, L, Gamal El-Din, T.M, Payandeh, J, Martinez, G.Q, Heard, T.M, Scheuer, T, Zheng, N, Catterall, W.A. 登録日 2013-09-18 公開日 2013-11-27 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature, 505, 2014
4MTF	Structural Basis of Ca2+ Selectivity of a Voltage-gated Calcium Channel 分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Ion transport protein 著者 Tang, L, Gamal El-Din, T.M, Payandeh, J, Martinez, G.Q, Heard, T.M, Scheuer, T, Zheng, N, Catterall, W.A. 登録日 2013-09-19 公開日 2013-11-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature, 505, 2014
4IP2	Putative Aromatic Acid Decarboxylase 分子名称: 1,2-ETHANEDIOL, Aromatic Acid Decarboxylase, GLYCEROL, ... 著者 Schneider, G, Brunner, K, Izumi, A, Jacewicz, A. 登録日 2013-01-09 公開日 2013-07-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural insights into the UbiD protein family from the crystal structure of PA0254 from Pseudomonas aeruginosa. Plos One, 8, 2013
4IHQ	Archaellum Assembly ATPase FlaI bound to ADP 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, FlaI ATPase, ... 著者 Reindl, S, Williams, G.J, Tainer, J.A. 登録日 2012-12-19 公開日 2013-03-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Insights into FlaI Functions in Archaeal Motor Assembly and Motility from Structures, Conformations, and Genetics. Mol.Cell, 49, 2013
2PC0	Apo Wild-type HIV Protease in the open conformation 分子名称: MAGNESIUM ION, Protease, R-1,2-PROPANEDIOL 著者 Heaslet, H, Rosenfeld, R, Giffin, M.J, Elder, J.H, McRee, D.E, Stout, C.D. 登録日 2007-03-29 公開日 2007-06-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Conformational flexibility in the flap domains of ligand-free HIV protease. Acta Crystallogr.,Sect.D, 63, 2007
4QR3	Brd4 Bromodomain 1 complex with its novel inhibitors 分子名称: Bromodomain-containing protein 4, N-cyclopentyl-3-(2-oxo-2,3-dihydro-1,3-thiazol-4-yl)benzenesulfonamide 著者 Xiong, B, Cao, D.Y, Chen, T.T, Xu, Y.C. 登録日 2014-06-30 公開日 2015-07-01 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.374 Å) 主引用文献 Fragment-based drug discovery of 2-thiazolidinones as BRD4 inhibitors: 2. Structure-based optimization J.Med.Chem., 58, 2015
4QSU	Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) in complex with thymine 分子名称: 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, SULFATE ION, ... 著者 Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2014-07-06 公開日 2014-07-23 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure-based approaches towards identification of fragments for the low-druggability ATAD2 bromodomain MedChemComm, 5, 2014

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