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7V5G
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20S+monoUb-CyclinB1-NT (S1)
分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
著者Xu, C, Cong, Y.
登録日2021-08-17
公開日2021-09-22
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.47 Å)
主引用文献The 20S as a stand-alone proteasome in cells can degrade the ubiquitin tag.
Nat Commun, 12, 2021
3BO2
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BU of 3bo2 by Molmil
A relaxed active site following exon ligation by a group I intron
分子名称: Group I intron P9, MAGNESIUM ION, RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*G)-3'), ...
著者Lipchock, S.V, Strobel, S.A.
登録日2007-12-17
公開日2008-04-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献A relaxed active site after exon ligation by the group I intron
Proc.Natl.Acad.Sci.Usa, 105, 2008
7V5M
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20S+monoUb-CyclinB1-NT (S2)
分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
著者Xu, C, Cong, Y.
登録日2021-08-17
公開日2021-09-22
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.88 Å)
主引用文献The 20S as a stand-alone proteasome in cells can degrade the ubiquitin tag.
Nat Commun, 12, 2021
3BQG
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Structure of the central domain (MsrA) of Neisseria meningitidis PilB (sulfenic acid form)
分子名称: Peptide methionine sulfoxide reductase msrA/msrB
著者Ranaivoson, F.M, Kauffmann, B, Favier, F.
登録日2007-12-20
公開日2008-02-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A structural analysis of the catalytic mechanism of methionine sulfoxide reductase A from Neisseria meningitidis
J.Mol.Biol., 377, 2008
3BSZ
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BU of 3bsz by Molmil
Crystal structure of the transthyretin-retinol binding protein-Fab complex
分子名称: Fab fragment heavy chain, Fab fragment light chain, Plasma retinol-binding protein, ...
著者Zanotti, G, Cendron, L, Gliubich, F, Folli, C, Berni, R.
登録日2007-12-27
公開日2008-11-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.38 Å)
主引用文献Structural and mutational analyses of protein-protein interactions between transthyretin and retinol-binding protein.
Febs J., 275, 2008
6VKL
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BU of 6vkl by Molmil
Negative stain reconstruction of the yeast exocyst octameric complex.
分子名称: Exocyst complex component EXO70, Exocyst complex component EXO84, Exocyst complex component SEC10, ...
著者Frost, A, Munson, M.
登録日2020-01-21
公開日2020-07-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献Exocyst structural changes associated with activation of tethering downstream of Rho/Cdc42 GTPases.
J. Cell Biol., 219, 2020
3BSN
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BU of 3bsn by Molmil
Norwalk Virus polymerase bound to 5-nitrocytidine triphosphate and primer-template RNA
分子名称: 5-nitrocytidine 5'-(tetrahydrogen triphosphate), GLYCEROL, MANGANESE (II) ION, ...
著者Zamyatkin, D.F, Ng, K.K.S.
登録日2007-12-26
公開日2008-01-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into mechanisms of catalysis and inhibition in norwalk virus polymerase.
J.Biol.Chem., 283, 2008
1AIU
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BU of 1aiu by Molmil
HUMAN THIOREDOXIN (D60N MUTANT, REDUCED FORM)
分子名称: THIOREDOXIN
著者Andersen, J.F, Gasdaska, J.R, Sanders, D.A.R, Weichsel, A, Powis, G, Montfort, W.R.
登録日1997-04-25
公開日1997-07-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Human thioredoxin homodimers: regulation by pH, role of aspartate 60, and crystal structure of the aspartate 60 --> asparagine mutant.
Biochemistry, 36, 1997
1A66
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SOLUTION NMR STRUCTURE OF THE CORE NFATC1/DNA COMPLEX, 18 STRUCTURES
分子名称: CORE NFATC1, DNA (5'-D(*CP*AP*AP*TP*TP*TP*TP*CP*CP*TP*CP*G)-3'), DNA (5'-D(*CP*GP*AP*GP*GP*AP*AP*AP*AP*TP*TP*G)-3')
著者Zhou, P, Sun, L.J, Doetsch, V, Wagner, G, Verdine, G.L.
登録日1998-03-06
公開日1998-06-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the core NFATC1/DNA complex.
Cell(Cambridge,Mass.), 92, 1998
6VVY
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BU of 6vvy by Molmil
Mycobacterium tuberculosis WT RNAP transcription open promoter complex with Sorangicin
分子名称: DNA (65-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Lilic, M, Boyaci, H, Chen, J, Darst, S.A, Campbell, E.A.
登録日2020-02-18
公開日2020-10-21
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VWP
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BU of 6vwp by Molmil
Crystal structure of E. coli guanosine kinase in complex with ppGpp
分子名称: GUANOSINE, GUANOSINE-5',3'-TETRAPHOSPHATE, Inosine-guanosine kinase, ...
著者Wang, B, Grant, R.A, Laub, M.T.
登録日2020-02-20
公開日2020-10-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献ppGpp Coordinates Nucleotide and Amino-Acid Synthesis in E. coli During Starvation.
Mol.Cell, 80, 2020
1AYJ
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BU of 1ayj by Molmil
DETERMINATION OF THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF RAPHANUS SATIVUS ANTIFUNGAL PROTEIN 1 (RS-AFP1) BY 1H NMR, 20 STRUCTURES
分子名称: ANTIFUNGAL PROTEIN 1
著者Fant, F, Borremans, F.A.M.
登録日1997-11-05
公開日1998-01-28
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献Determination of the three-dimensional solution structure of Raphanus sativus antifungal protein 1 by 1H NMR.
J.Mol.Biol., 279, 1998
1B56
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BU of 1b56 by Molmil
HUMAN RECOMBINANT EPIDERMAL FATTY ACID BINDING PROTEIN
分子名称: FATTY ACID BINDING PROTEIN, PALMITIC ACID
著者Van Tilbeurgh, H, Hohoff, C, Borchers, T, Spener, F.
登録日1999-01-12
公開日1999-10-05
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Expression, purification, and crystal structure determination of recombinant human epidermal-type fatty acid binding protein.
Biochemistry, 38, 1999
3C4M
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BU of 3c4m by Molmil
Structure of human parathyroid hormone in complex with the extracellular domain of its G-protein-coupled receptor (PTH1R)
分子名称: Fusion protein of Maltose-binding periplasmic protein and Parathyroid hormone/parathyroid hormone-related peptide receptor, Parathyroid hormone, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Pioszak, A.A, Xu, H.E.
登録日2008-01-30
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Molecular recognition of parathyroid hormone by its G protein-coupled receptor.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1AOG
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BU of 1aog by Molmil
TRYPANOSOMA CRUZI TRYPANOTHIONE REDUCTASE (OXIDIZED FORM)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, MALEIC ACID, TRYPANOTHIONE REDUCTASE
著者Bond, C.S, Zhang, Y, Hunter, W.N.
登録日1997-07-03
公開日1997-09-17
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of trypanothione reductase from the human pathogen Trypanosoma cruzi at 2.3 A resolution.
Protein Sci., 5, 1996
1AUR
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BU of 1aur by Molmil
PMSF-INHIBITED CARBOXYLESTERASE FROM PSEUDOMONAS FLUORESCENS
分子名称: CARBOXYLESTERASE, phenylmethanesulfonic acid
著者Kim, K.K, Song, H.K, Suh, S.W.
登録日1997-09-01
公開日1998-03-04
最終更新日2018-04-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of carboxylesterase from Pseudomonas fluorescens, an alpha/beta hydrolase with broad substrate specificity.
Structure, 5, 1997
1ATX
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BU of 1atx by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE NEUROTOXIN ATX IA FROM ANEMONIA SULCATA IN AQUEOUS SOLUTION DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
分子名称: ATX IA
著者Billeter, M, Widmer, H, Wuthrich, K.
登録日1990-05-14
公開日1991-04-15
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of the neurotoxin ATX Ia from Anemonia sulcata in aqueous solution determined by nuclear magnetic resonance spectroscopy.
Proteins, 6, 1989
3BQD
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BU of 3bqd by Molmil
Doubling the Size of the Glucocorticoid Receptor Ligand Binding Pocket by Deacylcortivazol
分子名称: 1-[(1R,2R,3aS,3bS,10aR,10bS,11S,12aS)-1,11-dihydroxy-2,5,10a,12a-tetramethyl-7-phenyl-1,2,3,3a,3b,7,10,10a,10b,11,12,12a-dodecahydrocyclopenta[5,6]naphtho[1,2-f]indazol-1-yl]-2-hydroxyethanone, Glucocorticoid receptor, Nuclear receptor coactivator 1
著者Xu, H.E.
登録日2007-12-20
公開日2008-01-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Doubling the size of the glucocorticoid receptor ligand binding pocket by deacylcortivazol.
Mol.Cell.Biol., 28, 2008
6VZH
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BU of 6vzh by Molmil
Structure of Human Vaccinia-related Kinase 1 (VRK1) Bound to LDSM311
分子名称: (7~{R})-2-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]amino]-5,7-dimethyl-8-prop-2-ynyl-7~{H}-pteridin-6-one, 1,2-ETHANEDIOL, SULFATE ION, ...
著者dos Reis, C.V, Dutra, L.A, Gama, F, Ferreira, M, Mascarello, A, Azevedo, H, Guimaraes, C, Massirer, K.B, Arruda, P, Edwards, A.M, Counago, R.M, Structural Genomics Consortium (SGC)
登録日2020-02-28
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure of Human Vaccinia-related Kinase 1 (VRK1) Bound to LDSM311
To be Published
3BVE
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BU of 3bve by Molmil
Structural basis for the iron uptake mechanism of Helicobacter pylori ferritin
分子名称: Ferritin, GLYCEROL
著者Kim, K.H, Cho, K.J, Lee, J.H, Shin, H.J, Yang, I.S.
登録日2008-01-07
公開日2009-01-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for the iron uptake mechanism of Helicobacter pylori ferritin
To be Published
7VBA
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BU of 7vba by Molmil
Structure of the pre state human RNA Polymerase I Elongation Complex
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3'), DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3'), ...
著者Zhao, D, Liu, W, Chen, K, Yang, H, Xu, Y.
登録日2021-08-31
公開日2022-02-16
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structure of the human RNA polymerase I elongation complex.
Cell Discov, 7, 2021
7VBC
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BU of 7vbc by Molmil
Back track state of human RNA Polymerase I Elongation Complex
分子名称: DNA (5'-D(*GP*TP*AP*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*G)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*AP*GP*CP*GP*TP*GP*TP*CP*AP*GP*CP*AP*AP*TP*A)-3'), DNA-directed RNA polymerase I subunit RPA1, ...
著者Zhao, D, Liu, W, Chen, K, Yang, H, Xu, Y.
登録日2021-08-31
公開日2022-02-16
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Structure of the human RNA polymerase I elongation complex.
Cell Discov, 7, 2021
7VBB
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Structure of the post state human RNA Polymerase I Elongation Complex
分子名称: DNA (25-MER), DNA (5'-D(*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*CP*GP*A)-3'), DNA-directed RNA polymerase I subunit RPA1, ...
著者Zhao, D, Liu, W, Chen, K, Yang, H, Xu, Y.
登録日2021-08-31
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Structure of the human RNA polymerase I elongation complex.
Cell Discov, 7, 2021
3B9R
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BU of 3b9r by Molmil
SERCA Ca2+-ATPase E2 aluminium fluoride complex without thapsigargin
分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
著者Olesen, C, Picard, M, Winther, A.M.L, Morth, J.P, Moller, J.V, Nissen, P.
登録日2007-11-06
公開日2007-12-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structural basis of calcium transport by the calcium pump
Nature, 450, 2007
7VIZ
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BU of 7viz by Molmil
class II photolyase MmCPDII oxidized to semiquinone TR-SFX studies (250 ns time-point)
分子名称: DNA photolyase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
著者Maestre-Reyna, M, Yang, C.-H, Huang, W.-C, Nango, E, Ngura Putu, E.P.G, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Hosokawa, Y, Saft, M, Emmerich, H.-J, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Royant, A, Gad, W, Pang, A.H, Chang, C.-W, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2021-09-28
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022

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