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7S5F
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Crystal structure of mannose-6-phosphate reductase from celery (Apium graveolens) leaves with NADP+ and mannonic acid bound
分子名称: D-MANNONIC ACID, Manose-6-phosphate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zheng, Y, Bhayani, J.A, Romina, I.M, Hartman, M.D, Cereijo, A.E, Ballicora, M.A, Iglesias, A.A, Figueroa, C.M, Liu, D.
登録日2021-09-10
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Determinants of Sugar Alcohol Biosynthesis in Plants: The Crystal Structures of Mannose-6-Phosphate and Aldose-6-Phosphate Reductases.
Plant Cell.Physiol., 63, 2022
5IJB
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BU of 5ijb by Molmil
The ligand-free structure of the mouse TLR4/MD-2 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lymphocyte antigen 96, ...
著者Wang, Y, Su, L, Morin, M.D, Jones, B.T, Whitby, L.R, Surakattula, M, Huang, H, Shi, H, Choi, J.H, Wang, K, Moresco, E.M, Berger, M, Zhan, X, Zhang, H, Boger, D.L, Beutler, B.
登録日2016-03-01
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献TLR4/MD-2 activation by a synthetic agonist with no similarity to LPS.
Proc.Natl.Acad.Sci.USA, 113, 2016
6YLD
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BU of 6yld by Molmil
Crystal structure of Trichoplax adhaerens trBcl-2L2 bound to trBak BH3
分子名称: 1,2-ETHANEDIOL, Bcl-2 homologous antagonist/killer, Bcl-2-like protein 1, ...
著者D Sa, J, Banjara, S, Kvansakul, M.
登録日2020-04-07
公開日2021-03-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Ancient and conserved functional interplay between Bcl-2 family proteins in the mitochondrial pathway of apoptosis.
Sci Adv, 6, 2020
7AGO
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BU of 7ago by Molmil
crystal structure of the N-acetylmuramyl-L-alanine amidase, Ami1, from Mycobacterium abscessus bound to L-Alanine-D-isoglutamine
分子名称: ALANINE, D-alpha-glutamine, N-acetylmuramoyl-L-alanine amidase, ...
著者Blaise, M.
登録日2020-09-23
公開日2020-11-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Functional Characterization of the N -Acetylmuramyl-l-Alanine Amidase, Ami1, from Mycobacterium abscessus .
Cells, 9, 2020
6H0P
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BU of 6h0p by Molmil
The structure of C100A mutant of Arabidopsis thaliana UDP-apiose/UDP-xylose synthase in complex with NADH and UDP-D-glucuronic acid
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-D-apiose/UDP-D-xylose synthase 1, URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
著者Savino, S, Mattevi, A.
登録日2018-07-10
公開日2019-10-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.47 Å)
主引用文献Deciphering the enzymatic mechanism of sugar ring contraction in UDP-apiose biosynthesis.
Nat Catal, 2, 2019
7RC6
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BU of 7rc6 by Molmil
Aeronamide N-methyltransferase, AerE, bound to modified peptide substrate, AerA-DL,34
分子名称: Aeronamide A peptide, Methyltransferase family protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Cogan, D.P, Reyes, R, Nair, S.K.
登録日2021-07-07
公開日2022-03-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7S1M
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BU of 7s1m by Molmil
Ex4-D-Ala bound to the glucagon-like peptide-1 receptor/g protein complex (conformer 1)
分子名称: Ex4-D-Ala, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Cary, B.P, Gellman, S.H.
登録日2021-09-02
公開日2022-01-05
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (2.41 Å)
主引用文献Structural and functional diversity among agonist-bound states of the GLP-1 receptor.
Nat.Chem.Biol., 18, 2022
8SP7
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BU of 8sp7 by Molmil
LINE-1 retrotransposon endonuclease domain complex with tranexamic acid
分子名称: LINE-1 retrotransposon endonuclease, SULFATE ION, TRANS-4-AMINOMETHYLCYCLOHEXANE-1-CARBOXYLIC ACID
著者D'Ordine, A.M, Jogl, G, Sedivy, J.M.
登録日2023-05-02
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Identification and characterization of small molecule inhibitors of the LINE-1 retrotransposon endonuclease.
Nat Commun, 15, 2024
4YTU
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BU of 4ytu by Molmil
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with L-erythrulose
分子名称: D-tagatose 3-epimerase, L-Erythrulose, MANGANESE (II) ION
著者Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
登録日2015-03-18
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
8VDY
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BU of 8vdy by Molmil
Crystal Structure of Delta 114-117 D-Dopachrome Tautomerase (D-DT)
分子名称: D-dopachrome decarboxylase
著者Parkins, A, Pilien, A, Wolff, A, Thompson, M.C, Pantouris, G.
登録日2023-12-18
公開日2024-05-01
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献The C-terminal Region of D-DT Regulates Molecular Recognition for Protein-Ligand Complexes.
J.Med.Chem., 67, 2024
8VFL
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BU of 8vfl by Molmil
Crystal Structure of WT D-Dopachrome Tautomerase (D-DT) at 290K
分子名称: D-dopachrome decarboxylase
著者Parkins, A, Pilien, A, Wolff, A, Thompson, M.C, Pantouris, G.
登録日2023-12-21
公開日2024-05-01
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献The C-terminal Region of D-DT Regulates Molecular Recognition for Protein-Ligand Complexes.
J.Med.Chem., 67, 2024
8VFN
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BU of 8vfn by Molmil
Crystal Structure of WT D-Dopachrome Tautomerase (D-DT) at 310K
分子名称: D-dopachrome decarboxylase
著者Parkins, A, Pilien, A, Wolff, A, Thompson, M.C, Pantouris, G.
登録日2023-12-21
公開日2024-05-01
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献The C-terminal Region of D-DT Regulates Molecular Recognition for Protein-Ligand Complexes.
J.Med.Chem., 67, 2024
4UBD
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BU of 4ubd by Molmil
Crystal structure of a neutralizing human monoclonal antibody with 1968 H3 HA
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
著者Shore, D.A, Yang, H, Cho, M, Donis, R.O, Stevens, J.
登録日2014-08-12
公開日2015-06-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献A potent broad-spectrum protective human monoclonal antibody crosslinking two haemagglutinin monomers of influenza A virus.
Nat Commun, 6, 2015
4XSL
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BU of 4xsl by Molmil
Crystal strcutre of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with glycerol
分子名称: D-tagatose 3-epimerase, GLYCEROL, MANGANESE (II) ION
著者Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
登録日2015-01-22
公開日2016-01-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
5NH6
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BU of 5nh6 by Molmil
Crystal structure of xylose isomerase from Piromyces E2 Complexed with one Mg2+ ion and xylitol
分子名称: MAGNESIUM ION, SULFATE ION, Xylitol, ...
著者Rozeboom, H.J, Janssen, D.B.
登録日2017-03-21
公開日2017-11-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
8VG7
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BU of 8vg7 by Molmil
Crystal Structure of T115A Variant of D-Dopachrome Tautomerase (D-DT)
分子名称: D-dopachrome decarboxylase
著者Parkins, A, Pilien, A, Wolff, A, Thompson, M.C, Pantouris, G.
登録日2023-12-23
公開日2024-05-01
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献The C-terminal Region of D-DT Regulates Molecular Recognition for Protein-Ligand Complexes.
J.Med.Chem., 67, 2024
5NHA
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BU of 5nha by Molmil
Crystal structure of xylose isomerase from Piromyces sp. E2 in complex with two Mn2+ ions and sorbitol
分子名称: MANGANESE (II) ION, SULFATE ION, Xylose isomerase, ...
著者Rozeboom, H.J, Janssen, D.B.
登録日2017-03-21
公開日2017-11-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
8DEJ
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BU of 8dej by Molmil
D. vulgaris type I-C Cascade bound to dsDNA target
分子名称: CRISPR-associated protein, CT1133 family, TM1801 family, ...
著者O'Brien, R.E, Bravo, J.P.K, Ramos, D, Hibshman, G.N, Wright, J.T, Taylor, D.W.
登録日2022-06-20
公開日2023-02-22
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Mol.Cell, 83, 2023
5TE3
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BU of 5te3 by Molmil
Crystal structure of Bos taurus opsin at 2.7 Angstrom
分子名称: PALMITIC ACID, Rhodopsin, SULFATE ION, ...
著者Gulati, S, Kiser, P.D, Palczewski, K.
登録日2016-09-20
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Photocyclic behavior of rhodopsin induced by an atypical isomerization mechanism.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5EI5
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BU of 5ei5 by Molmil
Crystal structure of MSF-aged Torpedo californica Acetylcholinesterase in complex with alkylene-linked bis-tacrine dimer (7 carbon linker)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, ...
著者Pesaresi, A, Lamba, D.
登録日2015-10-29
公開日2016-11-09
最終更新日2024-09-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Disentangling the formation, mechanism, and evolvement of the covalent methanesulfonyl fluoride acetylcholinesterase adduct: Insights into an aged-like inactive complex susceptible to reactivation by a combination of nucleophiles.
Protein Sci., 33, 2024
4PJ6
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BU of 4pj6 by Molmil
Crystal Structure of Human Insulin Regulated Aminopeptidase with Lysine in Active Site
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LYSINE, ...
著者Hermans, S.J, Ascher, D.B, Hancock, N.C, Holien, J.K, Michell, B, Morton, C.J, Parker, M.W.
登録日2014-05-12
公開日2014-12-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Crystal structure of human insulin-regulated aminopeptidase with specificity for cyclic peptides.
Protein Sci., 24, 2015
5D8D
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BU of 5d8d by Molmil
Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii
分子名称: D-alanine--D-alanine ligase
著者Huynh, K.H, Hong, M.K, Kang, L.W.
登録日2015-08-17
公開日2016-08-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The crystal structure of the D-alanine-D-alanine ligase from Acinetobacter baumannii suggests a flexible conformational change in the central domain before nucleotide binding
J. Microbiol., 53, 2015
5EHX
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BU of 5ehx by Molmil
Crystal structure of MSF-aged Torpedo californica Acetylcholinesterase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL, ...
著者Pesaresi, A, Lamba, D.
登録日2015-10-29
公開日2016-11-09
最終更新日2024-09-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Disentangling the formation, mechanism, and evolvement of the covalent methanesulfonyl fluoride acetylcholinesterase adduct: Insights into an aged-like inactive complex susceptible to reactivation by a combination of nucleophiles.
Protein Sci., 33, 2024
4TVK
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TORPEDO CALIFORNICA ACETYLCHOLINESTERASE IN COMPLEX WITH A CHLOROTACRINE-JUGLONE HYBRID INHIBITOR
分子名称: 2-({2-[(6-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]ethyl}amino)-5-hydroxynaphthalene-1,4-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pesaresi, A, Samez, S, Lamba, D.
登録日2014-06-27
公開日2014-10-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Multitarget Drug Design Strategy: Quinone-Tacrine Hybrids Designed To Block Amyloid-beta Aggregation and To Exert Anticholinesterase and Antioxidant Effects.
J.Med.Chem., 57, 2014
5DMX
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Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii, space group p212121
分子名称: D-alanine--D-alanine ligase
著者Huynh, K.H, Hong, M.K, Kang, L.W.
登録日2015-09-09
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献The crystal structure of the D-alanine-D-alanine ligase from Acinetobacter baumannii suggests a flexible conformational change in the central domain before nucleotide binding
J. Microbiol., 53, 2015

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