PDB: 37932 件ウェブページステータス検索Chemie searchBIRD

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6SCN	33mer structure of the Salmonella flagella MS-ring protein FliF 分子名称: Flagellar M-ring protein 著者 Johnson, S, Fong, Y.H, Deme, J.C, Furlong, E.J, Kuhlen, L, Lea, S.M. 登録日 2019-07-24 公開日 2020-03-18 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Symmetry mismatch in the MS-ring of the bacterial flagellar rotor explains the structural coordination of secretion and rotation. Nat Microbiol, 5, 2020
6SF2	Ternary complex of human bone morphogenetic protein 9 (BMP9) growth factor domain, its prodomain and extracellular domain of activin receptor-like kinase 1 (ALK1). 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Growth/differentiation factor 2, Serine/threonine-protein kinase receptor R3 著者 Salmon, R.M, Guo, J, Yu, M, Li, W. 登録日 2019-07-31 公開日 2020-04-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Molecular basis of ALK1-mediated signalling by BMP9/BMP10 and their prodomain-bound forms. Nat Commun, 11, 2020
7MK9	Complex structure of trailing EC of EC+EC (trailing EC-focused) 分子名称: DNA (40-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Yang, C, Murakami, K. 登録日 2021-04-22 公開日 2022-04-27 最終更新日 2023-05-17 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
6SHC	Crystal structure of human IRE1 luminal domain Q105C 分子名称: Serine/threonine-protein kinase/endoribonuclease IRE1 著者 Yan, Y, Ron, D. 登録日 2019-08-06 公開日 2020-01-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.55 Å) 主引用文献 Unstructured regions in IRE1 alpha specify BiP-mediated destabilisation of the luminal domain dimer and repression of the UPR. Elife, 8, 2019
6XZF	Nanobody in complex with eGFP 分子名称: Nanobody targeted against eGFP, TERBIUM(III) ION, eGFP 著者 Pompidor, G, Zimmermann, S, Loew, C, Schneider, T. 登録日 2020-02-04 公開日 2021-02-17 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Engineered nanobodies with a lanthanide binding motif for crystallographic phasing To Be Published
6X9Z	De novo design of transmembrane beta-barrels 分子名称: Transmembrane beta-barrels 著者 Bera, A.K, Vorobieva, A.A, Kang, A.S, Baker, D. 登録日 2020-06-03 公開日 2021-02-17 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 De novo design of transmembrane beta barrels. Science, 371, 2021
6XCS	Erythromycin esterase mutant EreC H289N in its open conformation 分子名称: EreC 著者 Zielinski, M, Berghuis, A.M. 登録日 2020-06-09 公開日 2021-02-17 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural and functional insights into esterase-mediated macrolide resistance. Nat Commun, 12, 2021
6MBF	GphF Dehydratase 1 分子名称: GphF Dehydratase 1, MAGNESIUM ION 著者 Dodge, G.J, Smith, J.L. 登録日 2018-08-29 公開日 2018-09-19 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.543 Å) 主引用文献 Molecular Basis for Olefin Rearrangement in the Gephyronic Acid Polyketide Synthase. ACS Chem. Biol., 13, 2018
6XF9	Crystal structure of KSHV ORF68 分子名称: Packaging protein UL32, ZINC ION 著者 Didychuk, A.L, Gates, S.N, Martin, A, Glaunsinger, B. 登録日 2020-06-15 公開日 2021-02-24 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 A pentameric protein ring with novel architecture is required for herpesviral packaging. Elife, 10, 2021
6SDG	Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA 分子名称: 21-7_A, 21-7_B, Auxin response factor 著者 Crespo, I, Weijers, D, Boer, D.R. 登録日 2019-07-27 公開日 2020-04-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.96 Å) 主引用文献 Design principles of a minimal auxin response system. Nat.Plants, 6, 2020
5WK9	R186AP450cam with CN and camphor 分子名称: CAMPHOR, CYANIDE ION, Camphor 5-monooxygenase, ... 著者 Poulos, T.L, Batabyal, D. 登録日 2017-07-24 公開日 2017-09-06 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.983 Å) 主引用文献 Effect of Redox Partner Binding on Cytochrome P450 Conformational Dynamics. J. Am. Chem. Soc., 139, 2017
6SDV	W-formate dehydrogenase from Desulfovibrio vulgaris - Formate reduced form 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ... 著者 Oliveira, A.R, Mota, C, Mourato, C, Domingos, R.M, Santos, M.F.A, Gesto, D, Guigliarelli, B, Santos-Silva, T, Romao, M.J, Pereira, I.C. 登録日 2019-07-29 公開日 2020-03-11 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Towards the mechanistic understanding of enzymatic CO2 reduction Acs Catalysis, 2020
6XA8	Crystal Structure of Human Scribble PDZ1:Vangl2 complex 分子名称: 1,2-ETHANEDIOL, C-terminal peptide of Vangl2, PHOSPHATE ION, ... 著者 How, J.Y, Kvansakul, M. 登録日 2020-06-04 公開日 2021-03-24 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis of the human Scribble-Vangl2 association in health and disease. Biochem.J., 478, 2021
5WLH	Crystal structure of LbaCas13a H328A (C2c2) bound to pre-crRNA (24-nt spacer) 分子名称: GLYCEROL, IODIDE ION, LbaCas13a H328A (C2c2), ... 著者 Knott, G.J, Doudna, J.A. 登録日 2017-07-26 公開日 2017-09-13 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.80001032 Å) 主引用文献 Guide-bound structures of an RNA-targeting A-cleaving CRISPR-Cas13a enzyme. Nat. Struct. Mol. Biol., 24, 2017
6SC9	dAb3/HOIP-RBR-HOIPIN-8 分子名称: 2-[3-[2,6-bis(fluoranyl)-4-(1~{H}-pyrazol-4-yl)phenyl]-3-oxidanylidene-prop-1-enyl]-4-(1-methylpyrazol-4-yl)benzoic acid, CHLORIDE ION, E3 ubiquitin-protein ligase RNF31, ... 著者 Tsai, Y.-C.I, Johansson, H, House, D, Rittinger, K. 登録日 2019-07-23 公開日 2019-11-27 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Single-Domain Antibodies as Crystallization Chaperones to Enable Structure-Based Inhibitor Development for RBR E3 Ubiquitin Ligases. Cell Chem Biol, 27, 2020
6X93	Interleukin-10 signaling complex with IL-10RA and IL-10RB 分子名称: Interleukin-10, Interleukin-10 receptor subunit alpha, Interleukin-10 receptor subunit beta 著者 Saxton, R.A, Tsutsumi, N, Gati, C, Garcia, K.C. 登録日 2020-06-02 公開日 2021-03-17 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure-based decoupling of the pro- and anti-inflammatory functions of interleukin-10. Science, 371, 2021
6XA6	Crystal Structure of Human Scribble PDZ3:Vangl2 Complex 分子名称: 1,2-ETHANEDIOL, Protein scribble homolog, Vang-like protein 2 著者 How, J.Y, Kvansakul, M. 登録日 2020-06-04 公開日 2021-03-24 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural basis of the human Scribble-Vangl2 association in health and disease. Biochem.J., 478, 2021
6X90	Structure of the guanine nucleotide exchange factor Sec12 bound to the small GTPase Sar1 分子名称: Guanine nucleotide-exchange factor SEC12, POTASSIUM ION, Small COPII coat GTPase SAR1 著者 Joiner, A.M.N, Fromme, J.C. 登録日 2020-06-02 公開日 2021-03-24 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Structural basis for the initiation of COPII vesicle biogenesis. Structure, 29, 2021
6XA7	Crystal Structure of Human Scribble PDZ2:Vangl2 complex 分子名称: 1,2-ETHANEDIOL, Protein scribble homolog, Vang-like protein 2 著者 How, J.Y, Kvansakul, M. 登録日 2020-06-04 公開日 2021-03-24 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of the human Scribble-Vangl2 association in health and disease. Biochem.J., 478, 2021
5WN0	APE1 exonuclease substrate complex with a C/G match 分子名称: DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), ... 著者 Freudenthal, B.D, Whitaker, A.M. 登録日 2017-07-31 公開日 2018-02-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Molecular snapshots of APE1 proofreading mismatches and removing DNA damage. Nat Commun, 9, 2018
6XRX	Crystal structure of the mosquito protein AZ1 as an MBP fusion 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Maltose/maltodextrin-binding periplasmic protein, ... 著者 Pedersen, L.C, Mueller, G.A, Foo, A.C.Y. 登録日 2020-07-14 公開日 2021-03-24 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 The mosquito protein AEG12 displays both cytolytic and antiviral properties via a common lipid transfer mechanism. Proc.Natl.Acad.Sci.USA, 118, 2021
6LTR	Crystal structure of Cas12i2 ternary complex with single Mg2+ bound in catalytic pocket 分子名称: 1,2-ETHANEDIOL, Cas12i2, DNA (35-MER), ... 著者 Huang, X, Sun, W, Cheng, Z, Chen, M, Li, X, Wang, J, Sheng, G, Gong, W, Wang, Y. 登録日 2020-01-23 公開日 2020-10-28 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Structural basis for two metal-ion catalysis of DNA cleavage by Cas12i2. Nat Commun, 11, 2020
6LO8	Cryo-EM structure of the TIM22 complex from yeast 分子名称: Mitochondrial import inner membrane translocase subunit TIM10, Mitochondrial import inner membrane translocase subunit TIM12, Mitochondrial import inner membrane translocase subunit TIM18, ... 著者 Zhang, Y, Zhou, X, Wu, X, Li, L. 登録日 2020-01-04 公開日 2020-09-30 最終更新日 2021-03-17 実験手法 ELECTRON MICROSCOPY (3.83 Å) 主引用文献 Structure of the mitochondrial TIM22 complex from yeast. Cell Res., 31, 2021
6XOC	Crystal structure of glVRC01 Fab in complex with anti-idiotypic iv4 Fab 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ... 著者 Aljedani, S.S, Weidle, C, Pancera, M. 登録日 2020-07-06 公開日 2021-03-31 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Development of a VRC01-class germline targeting immunogen derived from anti-idiotypic antibodies. Cell Rep, 35, 2021
6LU0	Crystal structure of Cas12i2 ternary complex with 12 nt spacer 分子名称: Cas12i2, DNA (5'-D(*GP*CP*CP*GP*CP*TP*TP*TP*CP*TP*T)-3'), DNA (5'-D(*GP*CP*TP*TP*GP*CP*TP*CP*TP*GP*TP*TP*GP*AP*AP*AP*GP*CP*GP*GP*C)-3'), ... 著者 Huang, X, Sun, W, Cheng, Z, Chen, M, Li, X, Wang, J, Sheng, G, Gong, W, Wang, Y. 登録日 2020-01-24 公開日 2020-10-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.22 Å) 主引用文献 Structural basis for two metal-ion catalysis of DNA cleavage by Cas12i2. Nat Commun, 11, 2020

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