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7VO9
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Streptomyces coelicolor zinc uptake regulator complexed with zinc and DNA (dimer of dimers)
分子名称: DNA (84-MER), Putative metal uptake regulation protein, ZINC ION
著者Yang, X, Zheng, J.
登録日2021-10-13
公開日2022-08-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
5DM7
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Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromycin A
分子名称: 23S ribosomal RNA, 50S ribosomal protein L1, 50S ribosomal protein L11, ...
著者Kaminishi, T, Schedlbauer, A, Ochoa-Lizarralde, B, Connell, S.R, Fucini, P.
登録日2015-09-08
公開日2015-11-11
最終更新日2015-11-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystallographic characterization of the ribosomal binding site and molecular mechanism of action of Hygromycin A.
Nucleic Acids Res., 43, 2015
2MXS
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Solution NMR-structure of the neomycin sensing riboswitch RNA bound to paromomycin
分子名称: PAROMOMYCIN, RNA (27-MER)
著者Schmidtke, S, Duchardt-Ferner, E, Ohlenschlaeger, O, Gottstein, D, Wohnert, J.
登録日2015-01-14
公開日2015-12-09
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献What a Difference an OH Makes: Conformational Dynamics as the Basis for the Ligand Specificity of the Neomycin-Sensing Riboswitch.
Angew.Chem.Int.Ed.Engl., 55, 2016
2N0J
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Solution NMR Structure of the 27 nucleotide engineered neomycin sensing riboswitch RNA-ribostamycin complex
分子名称: RIBOSTAMYCIN, RNA_(27-MER)
著者Duchardt-Ferner, E, Gottstein-Schmidtke, S.R, Weigand, J.E, Ohlenschlaeger, O.E, Wurm, J, Hammann, C, Suess, B, Woehnert, J.
登録日2015-03-09
公開日2016-02-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献What a Difference an OH Makes: Conformational Dynamics as the Basis for the Ligand Specificity of the Neomycin-Sensing Riboswitch.
Angew.Chem.Int.Ed.Engl., 55, 2016
1GHG
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CRYSTAL STRUCTURE OF VANCOMYCIN AGLYCON
分子名称: ACETIC ACID, DIMETHYL SULFOXIDE, VANCOMYCIN AGLYCON
著者Kaplan, J, Korty, B.D, Axelsen, P.H, Loll, P.J.
登録日2000-12-13
公開日2001-02-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献The Role of Sugar Residues in Molecular Recognition by Vancomycin
J.Med.Chem., 44, 2001
1RRV
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X-ray crystal structure of TDP-vancosaminyltransferase GtfD as a complex with TDP and the natural substrate, desvancosaminyl vancomycin.
分子名称: DESVANCOSAMINYL VANCOMYCIN, GLYCEROL, GLYCOSYLTRANSFERASE GTFD, ...
著者Mulichak, A.M, Lu, W, Losey, H.C, Walsh, C.T, Garavito, R.M.
登録日2003-12-09
公開日2004-05-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Vancosaminyltransferase Gtfd from the Vancomycin Biosynthetic Pathway: Interactions with Acceptor and Nucleotide Ligands
Biochemistry, 43, 2004
1FVM
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Complex of vancomycin with DI-acetyl-LYS-D-ALA-D-ALA
分子名称: DI-ACETYL-LYS-D-ALA-D-ALA, VANCOMYCIN, vancosamine-(1-2)-beta-D-glucopyranose
著者Nitanai, Y, Kakoi, K, Aoki, K.
登録日2000-09-20
公開日2000-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of the Complexes between Vancomycin and Cell-Wall Precursor Analogs.
J.Mol.Biol., 385, 2009
1PNV
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Crystal Structure of TDP-epi-Vancosaminyltransferase GtfA in complexes with TDP and Vancomycin
分子名称: GLYCOSYLTRANSFERASE GTFA, THYMIDINE-5'-DIPHOSPHATE, VANCOMYCIN, ...
著者Mulichak, A.M, Losey, H.C, Lu, W, Wawrzak, Z, Walsh, C.T, Garavito, R.M.
登録日2003-06-13
公開日2003-08-12
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the Tdp-Epi-Vancosaminyltransferase Gtfa from the Chloroeremomycin Biosynthetic Pathway.
Proc.Natl.Acad.Sci.USA, 100, 2003
1FAP
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THE STRUCTURE OF THE IMMUNOPHILIN-IMMUNOSUPPRESSANT FKBP12-RAPAMYCIN COMPLEX INTERACTING WITH HUMAN FRAP
分子名称: FK506-BINDING PROTEIN, FRAP, RAPAMYCIN IMMUNOSUPPRESSANT DRUG
著者Choi, J, Chen, J, Schreiber, S.L, Clardy, J.
登録日1996-03-15
公開日1997-07-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the FKBP12-rapamycin complex interacting with the binding domain of human FRAP.
Science, 273, 1996
3HZS
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S. aureus monofunctional glycosyltransferase (MtgA)in complex with moenomycin
分子名称: MOENOMYCIN, Monofunctional glycosyltransferase, PHOSPHATE ION
著者Heaslet, H, Miller, A.A, Shaw, B, Mistry, A.
登録日2009-06-24
公開日2009-07-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Characterization of the active site of S. aureus monofunctional glycosyltransferase (Mtg) by site-directed mutation and structural analysis of the protein complexed with moenomycin
J.Struct.Biol., 167, 2009
1GJ2
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CO(III)-BLEOMYCIN-OOH BOUND TO AN OLIGONUCLEOTIDE CONTAINING A PHOSPHOGLYCOLATE LESION
分子名称: 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ...
著者Hoehn, S.T, Junker, H.-D, Bunt, R.C, Turner, C.J, Stubbe, J.
登録日2000-11-01
公開日2001-06-06
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献Solution structure of Co(III)-bleomycin-OOH bound to a phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage.
Biochemistry, 40, 2001
1G5L
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CO(III)-BLEOMYCIN-OOH BOUND TO AN OLIGONUCLEOTIDE CONTAINING A PHOSPHOGLYCOLATE LESION
分子名称: 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ...
著者Hoehn, S.T, Junker, H.-D, Bunt, R.C, Turner, C.J, Stubbe, J.
登録日2000-11-01
公開日2001-06-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of Co(III)-bleomycin-OOH bound to a phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage.
Biochemistry, 40, 2001
3EKI
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BU of 3eki by Molmil
Structural insights of the Mycoplasma hyorhinis protein Mh-p37: A putative thiamine pyrophosphate transporter
分子名称: BROMIDE ION, CALCIUM ION, GLYCEROL, ...
著者Sippel, K.H, Robbins, A.H, Reutzel, R, McKenna, R.
登録日2008-09-19
公開日2009-06-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insights into the extracytoplasmic thiamine-binding lipoprotein p37 of Mycoplasma hyorhinis
J.Bacteriol., 191, 2009
1PA4
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Solution structure of a putative ribosome-binding factor from Mycoplasma pneumoniae (MPN156)
分子名称: Probable ribosome-binding factor A
著者Rubin, S.M, Pelton, J.G, Yokota, H, Kim, R, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
登録日2003-05-13
公開日2004-03-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a putative ribosome binding protein from Mycoplasma pneumoniae and comparison to a distant homolog.
J.STRUCT.FUNCT.GENOM., 4, 2003
8IBU
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Cryo-EM structure of the erythromycin-bound motilin receptor-Gq protein complex
分子名称: ERYTHROMYCIN A, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者You, C, Jiang, Y, Xu, H.E, Xu, Y.
登録日2023-02-10
公開日2023-04-12
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Structural basis for motilin and erythromycin recognition by motilin receptor.
Sci Adv, 9, 2023
1OFO
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Crystal Structure of the Tyrosine Regulated 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae in Complex with 2-Phosphoglycolate
分子名称: 2-PHOSPHOGLYCOLIC ACID, PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE
著者Koenig, V, Pfeil, A, Heinrich, G, Braus, G, Schneider, T.R.
登録日2003-04-17
公開日2004-04-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Substrate and Metal Complexes of 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae Provide New Insights Into the Catalytic Mechanism.
J.Mol.Biol., 337, 2004
1OFR
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CRYSTAL STRUCTURE OF THE TYROSINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE FROM SACCHAROMYCES CEREVISIAE COMPLEXED WITH PHENYLALANINE AND MANGANESE
分子名称: MANGANESE (II) ION, PHENYLALANINE, PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE
著者Koenig, V, Pfeil, A, Heinrich, G, Braus, G, Schneider, T.R.
登録日2003-04-18
公開日2004-04-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Substrate and Metal Complexes of 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae Provide New Insights Into the Catalytic Mechanism.
J.Mol.Biol., 337, 2004
1OG0
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CRYSTAL STRUCTURE OF THE MUTANT G226S OF THE TYROSINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE FROM SACCHAROMYCES CEREVISIAE COMPLEXED WITH PHENYLALANINE AND MANGANESE
分子名称: MANGANESE (II) ION, PHENYLALANINE, Phospho-2-dehydro-3-deoxyheptonate aldolase, ...
著者Koenig, V, Pfeil, A, Heinrich, G, Braus, G.H, Schneider, T.R.
登録日2003-04-22
公開日2004-04-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of the Mutant G226S of the Tyrosine-Regulated 3-Deoxy-D-Arabino-Heptulosonate -7-Phosphate Synthase from Saccharomyces Cerevisiae Complexed with Phenylalanine and Manganese
To be Published
1OFP
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CRYSTAL STRUCTURE OF THE TYROSINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE FROM SACCHAROMYCES CEREVISIAE
分子名称: PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE
著者Koenig, V, Pfeil, A, Heinrich, G, Braus, G.H, Schneider, T.R.
登録日2003-04-17
公開日2004-04-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Substrate and Metal Complexes of 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae Provide New Insights Into the Catalytic Mechanism
J.Mol.Biol., 337, 2004
1OFQ
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CRYSTAL STRUCTURE OF THE TYROSINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH MANGANESE(II)
分子名称: MANGANESE (II) ION, PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE
著者Koenig, V, Pfeil, A, Heinrich, G, Braus, G.H, Schneider, T.R.
登録日2003-04-17
公開日2004-04-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Substrate and Metal Complexes of 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae Provide New Insights Into the Catalytic Mechanism
J.Mol.Biol., 337, 2004
1JUX
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1.6A Resolution Crystal Structures of the DNA Octamers d(IUATATAC) and d(ITITACAC):Binding of Two Distamycin Drugs Side-by-Side
分子名称: 5'-D(*IP*TP*IP*TP*AP*CP*AP*C)-3', DISTAMYCIN A
著者Deng, J, Pan, B, Sundaralingam, M.
登録日2001-08-28
公開日2004-01-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of d(ITITACAC) complexed with distamycin at 1.6 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
1XPR
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Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)
分子名称: 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3', 5A-FORMYLBICYCLOMYCIN, MAGNESIUM ION, ...
著者Skordalakes, E, Brogan, A.P, Park, B.S, Kohn, H, Berger, J.M.
登録日2004-10-09
公開日2004-11-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural mechanism of inhibition of the rho transcription termination factor by the antibiotic bicyclomycin
Structure, 13, 2005
1PCH
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STRUCTURAL EVIDENCE FOR THE EVOLUTIONARY DIVERGENCE OF MYCOPLASMA FROM GRAM-POSITIVE BACTERIA: THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN
分子名称: PHOSPHOCARRIER PROTEIN, SULFATE ION
著者Pieper, U, Herzberg, O.
登録日1995-07-11
公開日1995-10-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural evidence for the evolutionary divergence of mycoplasma from gram-positive bacteria: the histidine-containing phosphocarrier protein.
Structure, 3, 1995
3V9R
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Crystal structure of Saccharomyces cerevisiae MHF complex
分子名称: SULFATE ION, Uncharacterized protein YDL160C-A, Uncharacterized protein YOL086W-A
著者Yang, H, Zhang, T, Zhong, C, Li, H, Zhou, J, Ding, J.
登録日2011-12-28
公開日2012-02-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Saccharomyces Cerevisiae MHF Complex Structurally Resembles the Histones (H3-H4)(2) Heterotetramer and Functions as a Heterotetramer
Structure, 20, 2012
1JTL
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The crystal structure of d(GGCCAATTGG) Complexed with Distamycin
分子名称: 5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3', DISTAMYCIN A
著者Uytterhoeven, K, Van Meervelt, L.
登録日2001-08-21
公開日2002-08-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Two 1 : 1 binding modes for distamycin in the minor groove of d(GGCCAATTGG).
Eur.J.Biochem., 269, 2002

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