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PDB: 176 件

1UWN
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The Initial Events in the Photocycle of Photoactive Yellow Protein: A Common Mechanism on Light Activation in Photoreceptor Proteins
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN, SULFATE ION
著者Kort, R, Hellingwerf, K.J, Ravelli, R.B.G.
登録日2004-02-10
公開日2004-03-25
最終更新日2019-02-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Initial events in the photocycle of photoactive yellow protein.
J. Biol. Chem., 279, 2004
1S1Z
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Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 to 500 nanoseconds
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive Yellow Protein
著者Anderson, S, Srajer, V, Pahl, R, Rajagopal, S, Schotte, F, Anfinrud, P, Wulff, M, Moffat, K.
登録日2004-01-07
公開日2004-06-15
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein
Structure, 12, 2004
1UWP
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Initial Events in the Photocycle of Photoactive Yellow Protein
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN, SULFATE ION
著者Kort, R, Hellingwerf, K.J, Ravelli, R.B.G.
登録日2004-02-11
公開日2006-05-10
最終更新日2019-02-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Initial events in the photocycle of photoactive yellow protein.
J. Biol. Chem., 279, 2004
1TS0
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BU of 1ts0 by Molmil
Structure of the pB1 intermediate from time-resolved Laue crystallography
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Ihee, H, Rajagopal, S, Srajer, V, Pahl, R, Anderson, S, Schmidt, M, Schotte, F, Anfinrud, P.A, Wulff, M, Moffat, K.
登録日2004-06-21
公開日2005-07-05
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1S4S
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Reaction Intermediate in the Photocycle of PYP, intermediate occupied between 100 micro-seconds to 5 milli-seconds
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Schmidt, M, Pahl, R, Srajer, V, Anderson, S, Ren, Z, Ihee, H, Rajagopal, S, Moffat, K.
登録日2004-01-17
公開日2004-04-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved x-ray data
Proc.Natl.Acad.Sci.USA, 101, 2004
1T1C
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BU of 1t1c by Molmil
Late intermediate IL3 from time-resolved crystallography of the E46Q mutant of PYP
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K.
登録日2004-04-15
公開日2005-01-18
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein
Structure, 13, 2005
3GEC
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BU of 3gec by Molmil
Crystal structure of a tandem PAS domain fragment of Drosophila PERIOD
分子名称: Period circadian protein
著者Yildiz, O, Wolf, E.
登録日2009-02-25
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural and functional analyses of PAS domain interactions of the clock proteins Drosophila PERIOD and mouse PERIOD2
Plos Biol., 7, 2009
3RTY
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Structure of an Enclosed Dimer Formed by The Drosophila Period Protein
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Period circadian protein
著者King, H.A, Hoelz, A, Crane, B.R, Young, M.W.
登録日2011-05-04
公開日2011-12-21
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure of an enclosed dimer formed by the Drosophila period protein.
J.Mol.Biol., 413, 2011
4LRY
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Crystal Structure of the E.coli DhaR(N)-DhaK(T79L) complex
分子名称: GLYCEROL, PTS-dependent dihydroxyacetone kinase operon regulatory protein, PTS-dependent dihydroxyacetone kinase, ...
著者Shi, R, McDonald, L, Cygler, M, Ekiel, I.
登録日2013-07-21
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Coiled-Coil Helix Rotation Selects Repressing or Activating State of Transcriptional Regulator DhaR.
Structure, 22, 2014
4LRZ
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Crystal Structure of the E.coli DhaR(N)-DhaL complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PTS-dependent dihydroxyacetone kinase operon regulatory protein, ...
著者Shi, R, McDonald, L, Cygler, M, Ekiel, I.
登録日2013-07-21
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Coiled-Coil Helix Rotation Selects Repressing or Activating State of Transcriptional Regulator DhaR.
Structure, 22, 2014
4LRX
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Crystal Structure of the E.coli DhaR(N)-DhaK complex
分子名称: GLYCEROL, PTS-dependent dihydroxyacetone kinase operon regulatory protein, PTS-dependent dihydroxyacetone kinase, ...
著者Shi, R, McDonald, L, Cygler, M, Ekiel, I.
登録日2013-07-21
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Coiled-Coil Helix Rotation Selects Repressing or Activating State of Transcriptional Regulator DhaR.
Structure, 22, 2014
1WA9
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Crystal Structure of the PAS repeat region of the Drosophila clock protein PERIOD
分子名称: PERIOD CIRCADIAN PROTEIN
著者Yildiz, O, Doi, M, Yujnovsky, I, Cardone, L, Berndt, A, Hennig, S, Schulze, S, Urbanke, C, Sassone-Corsi, P, Wolf, E.
登録日2004-10-25
公開日2005-01-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Crystal Structure and Interactions of the Pas Repeat Region of the Drosophila Clock Protein Period
Mol.Cell, 17, 2005
5XGB
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BU of 5xgb by Molmil
Crystal structure of the PAS-GGDEF-EAL domain of PA0861 from Pseudomonas aeruginosa
分子名称: Uncharacterized protein
著者Liu, C, Liew, C.W, Sreekanth, R, Lescar, J.
登録日2017-04-13
公開日2017-12-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Insights into Biofilm Dispersal Regulation from the Crystal Structure of the PAS-GGDEF-EAL Region of RbdA from Pseudomonas aeruginosa.
J. Bacteriol., 200, 2018
5NJ8
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Structural basis for aryl hydrocarbon receptor mediated gene activation
分子名称: ACETATE ION, Aryl hydrocarbon receptor, Aryl hydrocarbon receptor nuclear translocator, ...
著者Daumke, O, Schulte, K.W.
登録日2017-03-28
公開日2017-06-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural Basis for Aryl Hydrocarbon Receptor-Mediated Gene Activation.
Structure, 25, 2017
8H77
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Hsp90-AhR-p23-XAP2 complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, AH receptor-interacting protein, Aryl hydrocarbon receptor, ...
著者Wen, Z.L, Zhai, Y.J, Zhu, Y, Sun, F.
登録日2022-10-19
公開日2023-01-04
最終更新日2023-03-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of the cytosolic AhR complex.
Structure, 31, 2023
8QMO
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Cryo-EM structure of the benzo[a]pyrene-bound Hsp90-XAP2-AHR complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, AH receptor-interacting protein, Aryl hydrocarbon receptor, ...
著者Kwong, H.S, Grandvuillemin, L, Sirounian, S, Ancelin, A, Lai-Kee-Him, J, Carivenc, C, Lancey, C, Ragan, T.J, Hesketh, E.L, Bourguet, W, Gruszczyk, J.
登録日2023-09-24
公開日2024-01-10
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Structural Insights into the Activation of Human Aryl Hydrocarbon Receptor by the Environmental Contaminant Benzo[a]pyrene and Structurally Related Compounds.
J.Mol.Biol., 436, 2024
5V0L
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BU of 5v0l by Molmil
Crystal structure of the AHR-ARNT heterodimer in complex with the DRE
分子名称: Aryl hydrocarbon receptor, Aryl hydrocarbon receptor nuclear translocator, CITRIC ACID, ...
著者Seok, S.-H, Lee, W, Jiang, L, Bradfield, C.A, Xing, Y.
登録日2017-02-28
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural hierarchy controlling dimerization and target DNA recognition in the AHR transcriptional complex.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7RZW
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BU of 7rzw by Molmil
CryoEM structure of Arabidopsis thaliana phytochrome B
分子名称: 3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, Phytochrome B
著者Li, H, Burgie, E.S, Vierstra, R.D, Li, H.
登録日2021-08-27
公開日2022-04-13
最終更新日2022-04-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Plant phytochrome B is an asymmetric dimer with unique signalling potential.
Nature, 604, 2022
4F3L
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Crystal Structure of the Heterodimeric CLOCK:BMAL1 Transcriptional Activator Complex
分子名称: BMAL1b, Circadian locomoter output cycles protein kaput
著者Huang, N, Chelliah, Y, Shan, Y, Taylor, C, Yoo, S, Partch, C, Green, C.B, Zhang, H, Takahashi, J.
登録日2012-05-09
公開日2012-06-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.268 Å)
主引用文献Crystal structure of the heterodimeric CLOCK:BMAL1 transcriptional activator complex.
Science, 337, 2012
5SY5
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Crystal Structure of the Heterodimeric NPAS1-ARNT Complex
分子名称: Aryl hydrocarbon receptor nuclear translocator, Neuronal PAS domain-containing protein 1
著者Wu, D, Su, X, Potluri, N, Kim, Y, Rastinejad, F.
登録日2016-08-10
公開日2016-11-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献NPAS1-ARNT and NPAS3-ARNT crystal structures implicate the bHLH-PAS family as multi-ligand binding transcription factors.
Elife, 5, 2016
5SY7
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Crystal Structure of the Heterodimeric NPAS3-ARNT Complex with HRE DNA
分子名称: Aryl hydrocarbon receptor nuclear translocator, DNA (5'-D(*CP*AP*CP*GP*AP*CP*CP*CP*GP*CP*AP*CP*GP*TP*AP*CP*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*TP*GP*CP*GP*TP*AP*CP*GP*TP*GP*CP*GP*GP*GP*TP*CP*GP*T)-3'), ...
著者Wu, D, Su, X, Potluri, N, Kim, Y, Rastinejad, F.
登録日2016-08-10
公開日2016-11-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献NPAS1-ARNT and NPAS3-ARNT crystal structures implicate the bHLH-PAS family as multi-ligand binding transcription factors.
Elife, 5, 2016
5XGE
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Crystal structure of the PAS-GGDEF-EAL domain of PA0861 from Pseudomonas aeruginosa in complex with cyclic di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Uncharacterized protein PA0861
著者Liu, C, Liew, C.W, Sreekanth, R, Lescar, J.
登録日2017-04-13
公開日2017-12-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Insights into Biofilm Dispersal Regulation from the Crystal Structure of the PAS-GGDEF-EAL Region of RbdA from Pseudomonas aeruginosa.
J. Bacteriol., 200, 2018
5XGD
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Crystal structure of the PAS-GGDEF-EAL domain of PA0861 from Pseudomonas aeruginosa in complex with GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Uncharacterized protein PA0861
著者Liu, C, Liew, C.W, Sreekanth, R, Lescar, J.
登録日2017-04-13
公開日2017-12-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Insights into Biofilm Dispersal Regulation from the Crystal Structure of the PAS-GGDEF-EAL Region of RbdA from Pseudomonas aeruginosa.
J. Bacteriol., 200, 2018
7ZUB
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BU of 7zub by Molmil
Cryo-EM structure of the indirubin-bound Hsp90-XAP2-AHR complex
分子名称: (3~{Z})-3-(3-oxidanylidene-1~{H}-indol-2-ylidene)-1~{H}-indol-2-one, ADENOSINE-5'-DIPHOSPHATE, AH receptor-interacting protein, ...
著者Gruszczyk, J, Savva, C.G, Lai-Kee-Him, J, Bous, J, Ancelin, A, Kwong, H.S, Grandvuillemin, L, Bourguet, W.
登録日2022-05-12
公開日2022-11-23
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Cryo-EM structure of the agonist-bound Hsp90-XAP2-AHR cytosolic complex.
Nat Commun, 13, 2022
6E3S
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Crystal Structure of the Heterodimeric HIF-2 Complex with Antagonist PT2385
分子名称: 3-{[(1S)-2,2-difluoro-1-hydroxy-7-(methylsulfonyl)-2,3-dihydro-1H-inden-4-yl]oxy}-5-fluorobenzonitrile, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1
著者Wu, D, Su, X, Lu, J, Li, S, Hood, B, Vasile, S, Potluri, N, Diao, X, Kim, Y, Khorasanizadeh, S, Rastinejad, F.
登録日2018-07-15
公開日2019-02-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Bidirectional modulation of HIF-2 activity through chemical ligands.
Nat. Chem. Biol., 15, 2019

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