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PDB: 256 件

6NVA
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Crystal structure of Escherichia coli dihydrodipicolinate synthase and propionate covalently bound to K161.
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, SODIUM ION
著者Thomas, L.M, Chooback, L.
登録日2019-02-04
公開日2019-02-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Crystal structure of Escherichia coli dihydrodipicolinate synthase and propionate covalently bound to K161.
To Be Published
6T3T
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Structure of the 4-hydroxy-tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, SULFATE ION
著者Schmitz, R, Dietl, A, Mueller, M, Berben, T, Op den Camp, H, Barends, T.
登録日2019-10-11
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the 4-hydroxy-tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV and the phylogeny of the aminotransferase pathway.
Acta Crystallogr.,Sect.F, 76, 2020
3EB2
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Crystal structure of Dihydrodipicolinate Synthase from Rhodopseudomonas palustris at 2.0A resolution
分子名称: Putative dihydrodipicolinate synthetase, TRIETHYLENE GLYCOL
著者Satyanarayana, L, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-08-26
公開日2008-09-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Crystal structure of Dihydrodipicolinate Synthase from Rhodopseudomonas palustris at 2.0A resolution
To be Published
4LY8
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dihydrodipicolinate synthase from C. jejuni with pyruvate bound to the active site
分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
著者Conly, C.J.T.
登録日2013-07-30
公開日2015-01-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Tyrosine 110 Plays a Critical Role in Regulating the Allosteric Inhibition of Campylobacter jejuni Dihydrodipicolinate Synthase by Lysine.
Biochemistry, 53, 2014
5LKY
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X-ray crystal structure of N-acetylneuraminic acid lyase in complex with pyruvate, with the phenylalanine at position 190 replaced with the non-canonical amino acid dihydroxypropylcysteine.
分子名称: DI(HYDROXYETHYL)ETHER, N-acetylneuraminate lyase
著者Windle, C.L, Trinh, C.H, Pearson, A.R, Nelson, A.S, Berry, A.
登録日2016-07-25
公開日2017-03-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Extending enzyme molecular recognition with an expanded amino acid alphabet.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1HL2
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Crystal structure of N-acetylneuraminate lyase from E. coli mutant L142R in complex with b-hydroxypyruvate
分子名称: 3-HYDROXYPYRUVIC ACID, N-ACETYLNEURAMINATE LYASE SUBUNIT
著者Joerger, A.C, Fersht, A.R.
登録日2003-03-12
公開日2003-05-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mimicking Natural Evolution in Vitro: An N-Acetylneuraminate Lyase Mutant with an Increased Dihydrodipicolinate Synthase Activity
Proc.Natl.Acad.Sci.USA, 100, 2003
8DO5
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Crystal structure of NahE in complex with intermediate (R)-4-hydroxy-4-(2-hydroxyphenyl)-2-iminobutanoate
分子名称: (4R)-4-hydroxy-4-(2-hydroxyphenyl)butanoic acid, DIMETHYL SULFOXIDE, Trans-ohydrobenzylidenepyruvate hydratase aldolase
著者LeVieux, J.A, Hardtke, H.A, Zhang, Y.J.
登録日2022-07-12
公開日2022-12-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A mutagenic analysis of NahE, a hydratase-aldolase in the naphthalene degradative pathway.
Arch.Biochem.Biophys., 733, 2023
6P90
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Crystal structure of PaDHDPS2-H56Q mutant
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, GLYCEROL
著者Impey, R.E, Panjikar, S, Hall, C.J, Bock, L.J, Sutton, J.M, Perugini, M.A, Soares da Costa, T.P.
登録日2019-06-08
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification of two dihydrodipicolinate synthase isoforms from Pseudomonas aeruginosa that differ in allosteric regulation.
Febs J., 287, 2020
6XGS
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Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CITRIC ACID, PHOSPHATE ION
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2020-06-18
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330
to be published
6MQH
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Crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) from Burkholderia mallei
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2018-10-09
公開日2018-10-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) from Burkholderia mallei
To be Published
8GEK
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Dihydrodipicolinate synthase with pyruvate from Candidatus Liberibacter solanacearum
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase
著者Gilkes, J.M, Frampton, R.A, Board, A, Sheen, C.R, Smith, G.R, Dobson, R.C.J.
登録日2023-03-06
公開日2024-03-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Dihydrodipicolinate synthase with pyruvate from the plant pathogen, Candidatus Liberibacter solanacearum
To Be Published
4UR8
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Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with 2-oxoadipic acid
分子名称: 2-OXOADIPIC ACID, FORMIC ACID, KETO-DEOXY-D-GALACTARATE DEHYDRATASE
著者Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
登録日2014-06-26
公開日2014-12-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Structure and Function of a Decarboxylating Agrobacterium Tumefaciens Keto-Deoxy-D-Galactarate Dehydratase.
Biochemistry, 53, 2014
4UXD
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2-keto 3-deoxygluconate aldolase from Picrophilus torridus
分子名称: 1,2-ETHANEDIOL, 2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE ALDOLASE, DI(HYDROXYETHYL)ETHER, ...
著者Priftis, A, Zaitsev, V, Reher, M, Johnsen, U, Danson, M.J, Taylor, G.L, Schoenheit, P, Crennell, S.J.
登録日2014-08-22
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights into the Substrate Specificity of Archaeal Entner-Doudoroff Aldolases: The Structures of Picrophilus torridus 2-Keto-3-deoxygluconate Aldolase and Sulfolobus solfataricus 2-Keto-3-deoxy-6-phosphogluconate Aldolase in Complex with 2-Keto-3-deoxy-6-phosphogluconate.
Biochemistry, 57, 2018
6DAQ
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PhdJ bound to substrate intermediate
分子名称: PhdJ
著者Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
登録日2018-05-01
公開日2019-04-10
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6DAN
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PhdJ WT 2 Angstroms resolution
分子名称: CHLORIDE ION, PhdJ
著者Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
登録日2018-05-01
公開日2019-04-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.047 Å)
主引用文献Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
4R53
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dihydrodipicolinate synthase from C. jejuni with vacant active site and vacant allosteric site
分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, ...
著者Conly, C.J.T.
登録日2014-08-20
公開日2015-10-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Tyrosine 110 plays a critical role in regulating the allosteric inhibition of Campylobacter jejuni dihydrodipicolinate synthase by lysine.
Biochemistry, 53, 2014
4XKY
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Structure of dihydrodipicolinate synthase from the commensal bacterium Bacteroides thetaiotaomicron at 2.1 A resolution
分子名称: ACETATE ION, Dihydrodipicolinate synthase, SODIUM ION
著者Mank, N.J, Arnette, A.K, Klapper, V.G, Chruszcz, M.
登録日2015-01-12
公開日2015-04-01
最終更新日2015-04-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of dihydrodipicolinate synthase from the commensal bacterium Bacteroides thetaiotaomicron at 2.1 angstrom resolution.
Acta Crystallogr.,Sect.F, 71, 2015
2EHH
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Crystal structure of dihydrodipicolinate synthase from aquifex aeolicus
分子名称: Dihydrodipicolinate synthase, PHOSPHATE ION
著者Kumarevel, T.S, Karthe, P, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-06
公開日2007-05-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of dihydrodipicolinate synthase from aquifex aeolicus
To be Published
1NAL
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THE THREE-DIMENSIONAL STRUCTURE OF N-ACETYLNEURAMINATE LYASE FROM ESCHERICHIA COLI
分子名称: N-ACETYLNEURAMINATE LYASE, SULFATE ION
著者Izard, T, Lawrence, M.C, Malby, R.L, Lilley, G.G, Colman, P.M.
登録日1994-02-28
公開日1995-09-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The three-dimensional structure of N-acetylneuraminate lyase from Escherichia coli.
Structure, 2, 1994
4U4M
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Crystal structure of 0.5M urea unfolded YagE, a KDG aldolase protein in complex with Pyruvate
分子名称: 1,2-ETHANEDIOL, PYRUVIC ACID, UREA, ...
著者Manoj Kumar, P, Bhaskar, V, Manicka, S, Krishnaswamy, S.
登録日2014-07-24
公開日2015-07-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Crystal structure of 0.5M urea unfolded YagE, a KDG aldolase protein in complex with Pyruvate
To be published
5A8G
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Crystal structure of the wild-type Staphylococcus aureus N- acetylneurminic acid lyase in complex with fluoropyruvate
分子名称: N-ACETYLNEURAMINATE LYASE
著者Stockwell, J, Daniels, A.D, Windle, C.L, Harman, T, Woodhall, T, Trinh, C.H, Lebel, T, Pearson, A.R, Mulholland, K, Berry, A, Nelson, A.
登録日2015-07-15
公開日2015-11-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Evaluation of Fluoropyruvate as Nucleophile in Reactions Catalysed by N-Acetyl Neuraminic Acid Lyase Variants: Scope, Limitations and Stereoselectivity.
Org.Biomol.Chem., 14, 2016
1O5K
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Crystal structure of Dihydrodipicolinate synthase (TM1521) from Thermotoga maritima at 1.80 A resolution
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CALCIUM ION
著者Joint Center for Structural Genomics (JCSG)
登録日2003-09-22
公開日2003-10-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Dihydrodipicolinate synthase (TM1521) from Thermotoga maritima at 1.80 A resolution
To be published
2HMC
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The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens
分子名称: Dihydrodipicolinate synthase, MAGNESIUM ION
著者Kim, Y, Zhang, R, Xu, X, Zheng, H, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-07-11
公開日2006-09-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens
To be Published, 2006
5ZJM
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Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum
分子名称: 1,2-ETHANEDIOL, N-acetylneuraminate lyase
著者Kumar, J.P, Rao, H, Nayak, V, Subramanian, R.
登録日2018-03-21
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.323 Å)
主引用文献Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018
5ZKA
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Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum complexed with Pyruvate
分子名称: 1,2-ETHANEDIOL, N-acetylneuraminate lyase, TRIETHYLENE GLYCOL
著者Kumar, J.P, Rao, H, Nayak, V, Ramaswamy, S.
登録日2018-03-23
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018

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件を2024-09-11に公開中

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