4UXD

2-keto 3-deoxygluconate aldolase from Picrophilus torridus

Summary for 4UXD

Descriptor2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE ALDOLASE, GLYCEROL, ISOPROPYL ALCOHOL, ... (7 entities in total)
Functional Keywordstim barrel, lyase
Biological sourcePICROPHILUS TORRIDUS
Total number of polymer chains4
Total molecular weight138880.1
Authors
Priftis, A.,Zaitsev, V.,Reher, M.,Johnsen, U.,Danson, M.J.,Taylor, G.L.,Schoenheit, P.,Crennell, S.J. (deposition date: 2014-08-22, release date: 2015-09-30, Last modification date: 2018-07-11)
Primary citation
Zaitsev, V.,Johnsen, U.,Reher, M.,Ortjohann, M.,Taylor, G.L.,Danson, M.J.,Schonheit, P.,Crennell, S.J.
Insights into the Substrate Specificity of Archaeal Entner-Doudoroff Aldolases: The Structures of Picrophilus torridus 2-Keto-3-deoxygluconate Aldolase and Sulfolobus solfataricus 2-Keto-3-deoxy-6-phosphogluconate Aldolase in Complex with 2-Keto-3-deoxy-6-phosphogluconate.
Biochemistry, 57:3797-3806, 2018
PubMed: 29812914 (PDB entries with the same primary citation)
DOI: 10.1021/acs.biochem.8b00535
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.5 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2624 0.6% 3.3% 1.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
171916
PDB entries from 2020-12-02