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PDB: 51 件

2YSR
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Solution structure of the DEP domain from human DEP domain-containing protein 1
分子名称: DEP domain-containing protein 1
著者Zhang, H.P, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the DEP domain from human DEP domain-containing protein 1
To be Published
6VSK
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BU of 6vsk by Molmil
Crystal structure of the P-Rex1 DEP1 domain
分子名称: Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
著者Tesmer, J, Ravala, S.K.
登録日2020-02-11
公開日2020-07-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献The first DEP domain of the RhoGEF P-Rex1 autoinhibits activity and contributes to membrane binding.
J.Biol.Chem., 295, 2020
1FSH
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STRUCTURAL BASIS OF THE RECOGNITION OF THE DISHEVELLED DEP DOMAIN IN THE WNT SIGNALING PATHWAY
分子名称: DISHEVELLED-1
著者Wong, H.C, Zheng, J.
登録日2000-09-08
公開日2001-03-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural basis of the recognition of the dishevelled DEP domain in the Wnt signaling pathway.
Nat.Struct.Biol., 7, 2000
1W4M
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BU of 1w4m by Molmil
Structure of the human pleckstrin DEP domain by multidimensional NMR
分子名称: PLECKSTRIN
著者Civera, C, Simon, B, Stier, G, Sattler, M, Macias, M.J.
登録日2004-07-26
公開日2004-12-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and Dynamics of the Human Pleckstrin Dep Domain: Distinct Molecular Features of a Novel Dep Domain Subfamily
Proteins: Struct.,Funct., Genet., 58, 2005
5LNP
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BU of 5lnp by Molmil
Domain-swapped dimer of human Dishevelled2 DEP domain: monoclinic crystal form crystallised from monomeric fraction
分子名称: SULFATE ION, Segment polarity protein dishevelled homolog DVL-2
著者Renko, M, Gammons, M.V, Bienz, M.
登録日2016-08-05
公開日2016-10-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Wnt Signalosome Assembly by DEP Domain Swapping of Dishevelled.
Mol.Cell, 64, 2016
2CSO
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BU of 2cso by Molmil
Solution structure of the DEP domain of human pleckstrin
分子名称: Pleckstrin
著者Inoue, K, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-22
公開日2005-11-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the DEP domain of human pleckstrin
to be published
1UHW
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BU of 1uhw by Molmil
Solution structure of the DEP domain of mouse pleckstrin
分子名称: Pleckstrin
著者Inoue, K, Yoshida, M, Hatta, R, Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Tanaka, A, Osanai, T, Matsuo, Y, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-07-11
公開日2004-01-11
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the DEP domain of mouse pleckstrin
To be Published
1V3F
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Solution structure of the DEP domain of mouse pleckstrin2
分子名称: Pleckstrin 2
著者Inoue, K, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-10-31
公開日2004-04-30
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the DEP domain of mouse pleckstrin2
To be Published
5SUY
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BU of 5suy by Molmil
Domain-swapped dimer of human Dishevelled2 DEP domain: monoclinic crystal form crystallised from dimeric fraction
分子名称: SULFATE ION, Segment polarity protein dishevelled homolog DVL-2
著者Renko, M, Gammons, M.V, Bienz, M.
登録日2016-08-04
公開日2016-10-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Wnt Signalosome Assembly by DEP Domain Swapping of Dishevelled.
Mol.Cell, 64, 2016
5SUZ
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Domain-swapped dimer of human Dishevelled2 DEP domain: C-centered monoclinic crystal form crystallised from monomeric fraction
分子名称: Segment polarity protein dishevelled homolog DVL-2
著者Renko, M, Gammons, M.V, Bienz, M.
登録日2016-08-04
公開日2016-10-12
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Wnt Signalosome Assembly by DEP Domain Swapping of Dishevelled.
Mol.Cell, 64, 2016
7DKL
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Crystal structure of the tandem DEP domains of DEPTOR
分子名称: DEP domain-containing mTOR-interacting protein
著者Weng, Z.F, Shen, X.X, Liu, Y.F.
登録日2020-11-24
公開日2021-12-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Basis of DEPTOR to Recognize Phosphatidic Acid Using its Tandem DEP Domains.
J.Mol.Biol., 433, 2021
7PED
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DEPTOR DEP domain tandem (DEPt)
分子名称: DEP domain-containing mTOR-interacting protein
著者Waelchli, M, Jakob, R, Maier, T.
登録日2021-08-09
公開日2021-09-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Regulation of human mTOR complexes by DEPTOR.
Elife, 10, 2021
3ML6
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BU of 3ml6 by Molmil
a complex between Dishevelled2 and clathrin adaptor AP-2
分子名称: Chimeric complex between protein Dishevelled2 homolog dvl-2 and clathrin adaptor AP-2 complex subunit mu
著者Yu, A, Xing, Y, Harrison, S.C, Kirchhausen, T.L.
登録日2010-04-16
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural analysis of the interaction between Dishevelled2 and clathrin AP-2 adaptor, a critical step in noncanonical Wnt signaling.
Structure, 18, 2010
8FW5
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BU of 8fw5 by Molmil
Chimeric HsGATOR1-SpGtr-SpLam complex
分子名称: ALUMINUM FLUORIDE, GATOR complex protein DEPDC5, GATOR complex protein NPRL2, ...
著者Tettoni, S.D, Egri, S.B, Doxsey, D.D, Ouch, C, Chang, J, Song, K, Xu, C, Shen, K.
登録日2023-01-20
公開日2023-07-26
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Structure of the Schizosaccharomyces pombe Gtr-Lam complex reveals evolutionary divergence of mTORC1-dependent amino acid sensing.
Structure, 31, 2023
8TUA
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Full-length P-Rex1 in complex with inositol 1,3,4,5-tetrakisphosphate (IP4)
分子名称: INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
著者Cash, J.N, Tesmer, J.J.G.
登録日2023-08-15
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Full-length P-Rex1 in complex with inositol 1,3,4,5-tetrakisphosphate (IP4)
Elife, 2024
6CET
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BU of 6cet by Molmil
Cryo-EM structure of GATOR1
分子名称: GATOR complex protein DEPDC5, GATOR complex protein NPRL2, GATOR complex protein NPRL3
著者Shen, K, Huang, R.K, Brignole, E.J, Yu, Z, Sabatini, D.M.
登録日2018-02-12
公開日2018-03-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Architecture of the human GATOR1 and GATOR1-Rag GTPases complexes.
Nature, 556, 2018
6CES
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BU of 6ces by Molmil
Cryo-EM structure of GATOR1-RAG
分子名称: GATOR complex protein DEPDC5, GATOR complex protein NPRL2, GATOR complex protein NPRL3, ...
著者Shen, K, Huang, R.K, Brignole, E.J, Yu, Z, Sabatini, D.M.
登録日2018-02-12
公開日2018-03-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Architecture of the human GATOR1 and GATOR1-Rag GTPases complexes.
Nature, 556, 2018
7RX9
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BU of 7rx9 by Molmil
Structure of autoinhibited P-Rex1
分子名称: Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein, Endolysin chimera, SULFATE ION
著者Ellisdon, A.M, Chang, Y.
登録日2021-08-22
公開日2022-08-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Structure of the metastatic factor P-Rex1 reveals a two-layered autoinhibitory mechanism.
Nat.Struct.Mol.Biol., 29, 2022
7T3A
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BU of 7t3a by Molmil
GATOR1-RAG-RAGULATOR - Inhibitory Complex
分子名称: GATOR complex protein DEPDC5, GATOR complex protein NPRL2, GATOR complex protein NPRL3, ...
著者Egri, S.B, Shen, K.
登録日2021-12-07
公開日2022-04-06
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structures of the human GATOR1-Rag-Ragulator complex reveal a spatial-constraint regulated GAP mechanism.
Mol.Cell, 82, 2022
7T3C
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BU of 7t3c by Molmil
GATOR1-RAG-RAGULATOR - Dual Complex
分子名称: ALUMINUM FLUORIDE, GATOR complex protein DEPDC5, GATOR complex protein NPRL2, ...
著者Egri, S.B, Shen, K.
登録日2021-12-07
公開日2022-04-06
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structures of the human GATOR1-Rag-Ragulator complex reveal a spatial-constraint regulated GAP mechanism.
Mol.Cell, 82, 2022
7T3B
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BU of 7t3b by Molmil
GATOR1-RAG-RAGULATOR - GAP Complex
分子名称: ALUMINUM FLUORIDE, GATOR complex protein DEPDC5, GATOR complex protein NPRL2, ...
著者Egri, S.B, Shen, K.
登録日2021-12-07
公開日2022-04-06
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structures of the human GATOR1-Rag-Ragulator complex reveal a spatial-constraint regulated GAP mechanism.
Mol.Cell, 82, 2022
7SYF
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BU of 7syf by Molmil
Reconstruction of full-length Prex-1 (PtdIns(3,4,5)P3-dependent Rac Exchanger 1)
分子名称: Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein,Endolysin chimera
著者Lupton, C.J, Bayly-Jones, C, Ellisdon, A.M.
登録日2021-11-24
公開日2022-07-27
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of the metastatic factor P-Rex1 reveals a two-layered autoinhibitory mechanism.
Nat.Struct.Mol.Biol., 29, 2022
8U54
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The mTORC1 cholesterol sensor LYCHOS (GPR155)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Integral membrane protein GPR155
著者Bayly-Jones, C, Lupton, C.J, Ellisdon, A.M.
登録日2023-09-12
公開日2024-09-18
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.65 Å)
主引用文献LYCHOS is a human hybrid of a plant-like PIN transporter and a GPCR.
Nature, 2024
8U5V
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The mTORC1 cholesterol sensor LYCHOS (GPR155) - auxin bound, closed state
分子名称: 1H-INDOL-3-YLACETIC ACID, CHOLESTEROL HEMISUCCINATE, Integral membrane protein GPR155
著者Bayly-Jones, C, Lupton, C.J, Ellisdon, A.M.
登録日2023-09-13
公開日2024-09-18
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献LYCHOS is a human hybrid of a plant-like PIN transporter and a GPCR.
Nature, 2024
8U58
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The mTORC1 cholesterol sensor LYCHOS (GPR155) with tryptophan
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Integral membrane protein GPR155
著者Bayly-Jones, C, Lupton, C.J, Ellisdon, A.M.
登録日2023-09-12
公開日2024-09-18
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.45 Å)
主引用文献LYCHOS is a human hybrid of a plant-like PIN transporter and a GPCR.
Nature, 2024

 

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