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PDB: 62 件

9EN2
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Crystal structure of the metalloproteinase enhancer PCPE-1 complexed with nanobodies VHH-H4 and VHH-I5
分子名称: CALCIUM ION, GLYCEROL, Procollagen C-endopeptidase enhancer 1, ...
著者Lagoutte, P, Gueguen-Chaignon, V, Bourhis, J.-M, Vadon-Le Goff, S.
登録日2024-03-12
公開日2024-07-03
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mono- and Bi-specific Nanobodies Targeting the CUB Domains of PCPE-1 Reduce the Proteolytic Processing of Fibrillar Procollagens.
J.Mol.Biol., 436, 2024
2WNO
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BU of 2wno by Molmil
X-ray Structure of CUB_C domain from TSG-6
分子名称: CALCIUM ION, COBALT (II) ION, TUMOR NECROSIS FACTOR-INDUCIBLE GENE 6 PROTEIN
著者Briggs, D.C, Day, A.J.
登録日2009-07-13
公開日2010-09-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Metal Ion-Dependent Heavy Chain Transfer Activity of Tsg-6 Mediates Assembly of the Cumulus-Oocyte Matrix.
J.Biol.Chem., 290, 2015
3DEM
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BU of 3dem by Molmil
CUB1-EGF-CUB2 domain of HUMAN MASP-1/3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Complement factor MASP-3
著者Gaboriaud, C.
登録日2008-06-10
公開日2008-07-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the CUB1-EGF-CUB2 domain of human MASP-1/3 and identification of its interaction sites with mannan-binding lectin and ficolins
J.Biol.Chem., 283, 2008
6F1D
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BU of 6f1d by Molmil
CUB2 domain of C1r
分子名称: CALCIUM ION, Complement C1r subcomponent, SODIUM ION
著者Almitairi, J.O.M, Venkatraman Girija, U, Furze, C.M, Simpson-Gray, X, Badakshi, F, Marshall, J.E, Mitchell, D.A, Moody, P.C.E, Wallis, R.
登録日2017-11-21
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of the C1r-C1s interaction of the C1 complex of complement activation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1SFP
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BU of 1sfp by Molmil
CRYSTAL STRUCTURE OF ACIDIC SEMINAL FLUID PROTEIN (ASFP) AT 1.9 A RESOLUTION: A BOVINE POLYPEPTIDE FROM THE SPERMADHESIN FAMILY
分子名称: ASFP
著者Romao, M.J, Kolln, I, Dias, J.M, Carvalho, A.L, Romero, A, Varela, P.F, Sanz, L, Topfer-Petersen, E, Calvete, J.J.
登録日1997-06-24
公開日1998-06-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structures of two spermadhesins reveal the CUB domain fold.
Nat.Struct.Biol., 4, 1997
1SPP
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BU of 1spp by Molmil
THE CRYSTAL STRUCTURES OF TWO MEMBERS OF THE SPERMADHESIN FAMILY REVEAL THE FOLDING OF THE CUB DOMAIN
分子名称: MAJOR SEMINAL PLASMA GLYCOPROTEIN PSP-I, MAJOR SEMINAL PLASMA GLYCOPROTEIN PSP-II
著者Romero, A, Romao, M.J, Varela, P.F, Kolln, I, Dias, J.M, Carvalho, A.L, Sanz, L, Topfer-Petersen, E, Calvete, J.J.
登録日1997-06-19
公開日1998-06-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structures of two spermadhesins reveal the CUB domain fold.
Nat.Struct.Biol., 4, 1997
3POJ
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BU of 3poj by Molmil
Crystal structure of MASP-1 CUB2 domain bound to Ethylamine
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ETHANAMINE, ...
著者Gingras, A.R, Moody, P.C.E, Wallis, R.
登録日2010-11-22
公開日2011-08-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.451 Å)
主引用文献Structural Basis of Mannan-Binding Lectin Recognition by Its Associated Serine Protease MASP-1: Implications for Complement Activation.
Structure, 19, 2011
3POF
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BU of 3pof by Molmil
Crystal structure of MASP-1 CUB2 domain bound to Ca2+
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Mannan-binding lectin serine protease 1, ...
著者Gingras, A.R, Moody, P.C.E, Wallis, R.
登録日2010-11-22
公開日2011-08-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Structural Basis of Mannan-Binding Lectin Recognition by Its Associated Serine Protease MASP-1: Implications for Complement Activation.
Structure, 19, 2011
3POI
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BU of 3poi by Molmil
Crystal structure of MASP-1 CUB2 domain bound to Methylamine
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, METHYLAMINE, ...
著者Gingras, A.R, Moody, P.C.E, Wallis, R.
登録日2010-11-22
公開日2011-08-24
最終更新日2011-11-30
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Structural Basis of Mannan-Binding Lectin Recognition by Its Associated Serine Protease MASP-1: Implications for Complement Activation.
Structure, 19, 2011
3POB
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BU of 3pob by Molmil
Crystal structure of MASP-1 CUB2 domain in complex with the collagen-like domain of MBL
分子名称: CALCIUM ION, MBL collagen-like peptide, Mannan-binding lectin serine protease 1
著者Gingras, A.R, Moody, P.C.E, Wallis, R.
登録日2010-11-22
公開日2011-08-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structural Basis of Mannan-Binding Lectin Recognition by Its Associated Serine Protease MASP-1: Implications for Complement Activation.
Structure, 19, 2011
3POG
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BU of 3pog by Molmil
Crystal structure of the MASP-1 CUB2 domain bound to Ca2+
分子名称: CALCIUM ION, Mannan-binding lectin serine protease 1
著者Gingras, A.R, Moody, P.C.E, Wallis, R.
登録日2010-11-22
公開日2011-08-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.749 Å)
主引用文献Structural Basis of Mannan-Binding Lectin Recognition by Its Associated Serine Protease MASP-1: Implications for Complement Activation.
Structure, 19, 2011
3POE
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BU of 3poe by Molmil
Crystal structure of the MASP-1 CUB2 domain bound to Ca2+
分子名称: CALCIUM ION, Mannan-binding lectin serine protease 1
著者Gingras, A.R, Moody, P.C.E, Wallis, R.
登録日2010-11-22
公開日2011-08-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Structural Basis of Mannan-Binding Lectin Recognition by Its Associated Serine Protease MASP-1: Implications for Complement Activation.
Structure, 19, 2011
7T4S
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BU of 7t4s by Molmil
CryoEM structure of the HCMV Pentamer gH/gL/UL128/UL130/UL131A in complex with NRP2 and neutralizing fabs 8I21 and 13H11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Envelope glycoprotein H, ...
著者Kschonsak, M, Johnson, M.C, Schelling, R, Green, E.M, Rouge, L, Ho, H, Patel, N, Kilic, C, Kraft, E, Arthur, C.P, Rohou, A.L, Comps-Agrar, L, Martinez-Martin, N, Perez, L, Payandeh, J, Ciferri, C.
登録日2021-12-10
公開日2022-03-23
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for HCMV Pentamer receptor recognition and antibody neutralization.
Sci Adv, 8, 2022
1SZB
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BU of 1szb by Molmil
Crystal structure of the human MBL-associated protein 19 (MAp19)
分子名称: CALCIUM ION, mannose binding lectin-associated serine protease-2 related protein, MAp19 (19kDa)
著者Gregory, L.A, Thielens, N.M, Arlaud, G.J, Fontecilla-Camps, J.C, Gaboriaud, C.
登録日2004-04-05
公開日2004-06-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The X-ray structure of human MBL-associated protein 19 (MAp19) and its interaction site with mannan-binding lectin and L-ficolin
J.Biol.Chem., 279, 2004
3KQ4
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BU of 3kq4 by Molmil
Structure of Intrinsic Factor-Cobalamin bound to its receptor Cubilin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Andersen, C.B.F, Madsen, M, Moestrup, S.K, Andersen, G.R.
登録日2009-11-17
公開日2010-03-09
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis for receptor recognition of vitamin-B(12)-intrinsic factor complexes.
Nature, 464, 2010
7M0R
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BU of 7m0r by Molmil
Cryo-EM structure of the Sema3A/PlexinA4/Neuropilin 1 complex
分子名称: CALCIUM ION, Neuropilin-1, Plexin-A4, ...
著者Lu, D, Shang, G, He, X, Bai, X, Zhang, X.
登録日2021-03-11
公開日2021-05-05
最終更新日2021-06-09
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Architecture of the Sema3A/PlexinA4/Neuropilin tripartite complex.
Nat Commun, 12, 2021
4GZA
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BU of 4gza by Molmil
Complex of mouse Plexin A2 - Semaphorin 3A - Neuropilin-1
分子名称: CALCIUM ION, Neuropilin-1, Plexin-A2, ...
著者Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y.
登録日2012-09-06
公開日2012-10-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (7 Å)
主引用文献Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Nat.Struct.Mol.Biol., 19, 2012
4GZ9
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BU of 4gz9 by Molmil
Mouse Neuropilin-1, extracellular domains 1-4 (a1a2b1b2)
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y.
登録日2012-09-06
公開日2012-10-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Nat.Struct.Mol.Biol., 19, 2012
8IVW
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BU of 8ivw by Molmil
Crystal structure of NRP2 in complex with aNRP2-10 Fab fragment
分子名称: Heavy chian of antibody 10V8 Fab fragment, Light chain of antibody 10V8 Fab fragment, Neuropilin-2
著者Geng, Y, Zhai, L.
登録日2023-03-29
公開日2023-07-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.205 Å)
主引用文献Inhibition of VEGF binding to neuropilin-2 enhances chemosensitivity and inhibits metastasis in triple-negative breast cancer.
Sci Transl Med, 15, 2023
8IVX
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BU of 8ivx by Molmil
Crystal structure of NRP2 in complex with aNRP2-14 Fab fragment
分子名称: 1,2-ETHANEDIOL, Heavy chain of antibody 14V4 Fab fragment, Light chain of antibody 14V4 Fab fragment, ...
著者Geng, Y, Zhai, L.
登録日2023-03-29
公開日2023-07-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Inhibition of VEGF binding to neuropilin-2 enhances chemosensitivity and inhibits metastasis in triple-negative breast cancer.
Sci Transl Med, 15, 2023
7M22
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BU of 7m22 by Molmil
Cryo-EM structure of the HCMV pentamer bound by human neuropilin 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Envelope glycoprotein UL130, ...
著者Wrapp, D, McLellan, J.S.
登録日2021-03-15
公開日2021-08-11
最終更新日2022-03-23
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Structural basis for HCMV Pentamer recognition by neuropilin 2 and neutralizing antibodies.
Sci Adv, 8, 2022
6FZW
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BU of 6fzw by Molmil
Crystal structure of the metalloproteinase enhancer PCPE-1 bound to the procollagen C propeptide trimer (long)
分子名称: CALCIUM ION, CITRATE ANION, Collagen alpha-1(III) chain, ...
著者Hohenester, E, Pulido, D.
登録日2018-03-15
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Structural Basis for the Acceleration of Procollagen Processing by Procollagen C-Proteinase Enhancer-1.
Structure, 26, 2018
6FZV
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Crystal structure of the metalloproteinase enhancer PCPE-1 bound to the procollagen C propeptide trimer (short)
分子名称: CALCIUM ION, CHLORIDE ION, CITRATE ANION, ...
著者Pulido, D, Hohenester, E.
登録日2018-03-15
公開日2018-07-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Basis for the Acceleration of Procollagen Processing by Procollagen C-Proteinase Enhancer-1.
Structure, 26, 2018
6GH8
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Crystal structure of GP1 domain of Lujo virus in complex with the first CUB domain of neuropilin-2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Glycoprotein, ...
著者Cohen-Dvashi, H, Kilimnik, I, Diskin, R.
登録日2018-05-06
公開日2018-07-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Structural basis for receptor recognition by Lujo virus.
Nat Microbiol, 3, 2018
2QQO
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Crystal Structure of the a2b1b2 Domains from Human Neuropilin-2
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Appleton, B.A, Wiesmann, C.
登録日2007-07-26
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural studies of neuropilin/antibody complexes provide insights into semaphorin and VEGF binding
Embo J., 26, 2007

 

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