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PDB: 51 件

6TGK
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Domain swapped E6AP C-lobe dimer
分子名称: ACETATE ION, CALCIUM ION, Ubiquitin-protein ligase E3A
著者Ries, L.K, Feiler, C, Lowe, L.D, Liess, A.K.L, Lorenz, S.
登録日2019-11-16
公開日2020-02-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of the catalytic C-lobe of the HECT-type ubiquitin ligase E6AP.
Protein Sci., 29, 2020
4JOR
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BU of 4jor by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to HPV18 E6 oncoprotein C-terminal peptide (RLQRRRETQV)
分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, Protein E6
著者Amacher, J.F, Madden, D.R.
登録日2013-03-18
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses.
Structure, 22, 2014
5K4F
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BU of 5k4f by Molmil
CAL PDZ mutant C319A with a peptide
分子名称: Golgi-associated PDZ and coiled-coil motif-containing protein, HPV18E6 peptide
著者Zhao, Y, Madden, D.R.
登録日2016-05-20
公開日2017-08-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献CAL PDZ domain mutant with a peptide
To Be Published
6WBJ
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BU of 6wbj by Molmil
High resolution crystal structure of mRECK(CC4) in fusion with engineered MBP
分子名称: GLYCEROL, Maltodextrin-binding protein,Reversion-inducing cysteine-rich protein with Kazal motifs fusion, SULFATE ION, ...
著者Chang, T.H, Hsieh, F.L, Gabelli, S.B, Nathans, J.
登録日2020-03-26
公開日2020-06-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献Structure of the RECK CC domain, an evolutionary anomaly.
Proc.Natl.Acad.Sci.USA, 117, 2020
5IC3
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BU of 5ic3 by Molmil
CAL PDZ domain with peptide and inhibitor
分子名称: 4-[methyl(nitroso)amino]benzene-1,2-diol, Golgi-associated PDZ and coiled-coil motif-containing protein, HPV18E6 Peptide
著者Zhao, Y, Madden, D.R.
登録日2016-02-22
公開日2017-08-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献CAL PDZ domain with peptide and inhibitor
To Be Published
8CE0
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BU of 8ce0 by Molmil
N-terminal domain of human apolipoprotein E
分子名称: GLYCEROL, Maltodextrin-binding protein,Apolipoprotein E
著者Marek, M, Nemergut, M.
登録日2023-02-01
公開日2023-07-19
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Domino-like effect of C112R mutation on ApoE4 aggregation and its reduction by Alzheimer's Disease drug candidate.
Mol Neurodegener, 18, 2023
6ZFG
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BU of 6zfg by Molmil
14-3-3 zeta chimera with 18E6 and fusicoccin
分子名称: 14-3-3 protein zeta/delta,Protein E6, FUSICOCCIN, GLYCEROL
著者Gogl, G, Tugaeva, K, Sluchanko, N.N, Trave, G.
登録日2020-06-17
公開日2021-02-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Hierarchized phosphotarget binding by the seven human 14-3-3 isoforms.
Nat Commun, 12, 2021
8OEP
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BU of 8oep by Molmil
Crystal structure of the PTPN3 PDZ domain bound to the HPV18 E6 oncoprotein C-terminal peptide
分子名称: Protein E6, SODIUM ION, Tyrosine-protein phosphatase non-receptor type 3
著者Genera, M, Colcombet-Cazenave, B, Croitoru, A, Raynal, B, Mechaly, A, Caillet, J, Haouz, A, Wolff, N, Caillet-Saguy, C.
登録日2023-03-11
公開日2023-05-10
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Interactions of the protein tyrosine phosphatase PTPN3 with viral and cellular partners through its PDZ domain: insights into structural determinants and phosphatase activity.
Front Mol Biosci, 10, 2023
6ZFD
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BU of 6zfd by Molmil
14-3-3 zeta bound to the phosphorylated 18E6 C-terminus
分子名称: 14-3-3 protein zeta/delta,Protein E6, GLYCEROL
著者Gogl, G, Tugaeva, K.V, Sluchanko, N.N, Trave, G.
登録日2020-06-17
公開日2021-02-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Hierarchized phosphotarget binding by the seven human 14-3-3 isoforms.
Nat Commun, 12, 2021
8CDY
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BU of 8cdy by Molmil
N-terminal domain of human apolipoprotein E
分子名称: Maltodextrin-binding protein,Apolipoprotein E
著者Marek, M, Nemergut, M.
登録日2023-02-01
公開日2023-07-19
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Domino-like effect of C112R mutation on ApoE4 aggregation and its reduction by Alzheimer's Disease drug candidate.
Mol Neurodegener, 18, 2023
6SJV
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BU of 6sjv by Molmil
Structure of HPV18 E6 oncoprotein in complex with mutant E6AP LxxLL motif
分子名称: Maltodextrin-binding protein,Protein E6,Ubiquitin-protein ligase E3A, ZINC ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Suarez, I.P, Cousido-Siah, A, Bonhoure, A, Kostmann, C, Mitschler, A, Podjarny, A, Trave, G.
登録日2019-08-14
公開日2019-09-04
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.029 Å)
主引用文献Cellular target recognition by HPV18 and HPV49 oncoproteins
To be published
7CY6
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BU of 7cy6 by Molmil
Crystal Structure of CMD1 in complex with 5mC-DNA
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(P*(5CM)P*GP*CP*GP*CP*GP*GP*GP*A)-3'), FE (II) ION, ...
著者Li, W, Zhang, T, Sun, M, Ding, J.
登録日2020-09-03
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
7CY7
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BU of 7cy7 by Molmil
Crystal Structure of CMD1 in complex with DNA
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(P*CP*GP*CP*GP*CP*GP*GP*GP*A)-3'), FE (II) ION, ...
著者Li, W, Zhang, T, Sun, M, Ding, J.
登録日2020-09-03
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
2I04
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BU of 2i04 by Molmil
X-ray crystal structure of MAGI-1 PDZ1 bound to the C-terminal peptide of HPV18 E6
分子名称: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1, SULFATE ION, ...
著者Chen, X.S, Zhang, Y, Dasgupta, J, Banks, L, Thomas, M.
登録日2006-08-09
公開日2007-02-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of a Human Papillomavirus (HPV) E6 Polypeptide Bound to MAGUK Proteins: Mechanisms of Targeting Tumor Suppressors by a High-Risk HPV Oncoprotein.
J.Virol., 81, 2007
7CY5
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BU of 7cy5 by Molmil
Crystal Structure of CMD1 in complex with vitamin C
分子名称: ASCORBIC ACID, CITRIC ACID, FE (III) ION, ...
著者Li, W, Zhang, T, Sun, M, Ding, J.
登録日2020-09-03
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
4XR8
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BU of 4xr8 by Molmil
Crystal structure of the HPV16 E6/E6AP/p53 ternary complex at 2.25 A resolution
分子名称: 1,2-ETHANEDIOL, Cellular tumor antigen p53, DI(HYDROXYETHYL)ETHER, ...
著者Martinez-Zapien, D, Ruiz, F.X, Mitschler, A, Podjarny, A, Trave, G, Zanier, K.
登録日2015-01-20
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of the E6/E6AP/p53 complex required for HPV-mediated degradation of p53.
Nature, 529, 2016
7XMN
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BU of 7xmn by Molmil
Structure of SARS-CoV-2 ORF8
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, Maltodextrin-binding protein, ...
著者Chen, X, Xu, W.
登録日2022-04-26
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Glycosylated, Lipid-Binding, CDR-Like Domains of SARS-CoV-2 ORF8 Indicate Unique Sites of Immune Regulation.
Microbiol Spectr, 11, 2023
2I0L
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BU of 2i0l by Molmil
X-ray crystal structure of Sap97 PDZ2 bound to the C-terminal peptide of HPV18 E6.
分子名称: Disks large homolog 1, peptide E6
著者Chen, X.S, Zhang, Y, Dasgupta, J, Banks, L, Thomas, M.
登録日2006-08-10
公開日2007-02-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structures of a Human Papillomavirus (HPV) E6 Polypeptide Bound to MAGUK Proteins: Mechanisms of Targeting Tumor Suppressors by a High-Risk HPV Oncoprotein.
J.Virol., 81, 2007
7QPB
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BU of 7qpb by Molmil
Catalytic C-lobe of the HECT-type ubiquitin ligase E6AP in complex with a hybrid foldamer-peptide macrocycle
分子名称: Isoform I of Ubiquitin-protein ligase E3A, hybrid foldamer-peptide macrocycle
著者Dengler, S, Howard, R.T, Morozov, V, Tsiamantas, C, Douat, C, Suga, H, Huc, I.
登録日2022-01-03
公開日2023-09-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.342 Å)
主引用文献Display Selection of a Hybrid Foldamer-Peptide Macrocycle.
Angew.Chem.Int.Ed.Engl., 62, 2023
8JYX
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BU of 8jyx by Molmil
Crystal structure of the gasdermin-like protein RCD-1-1 from Neurospora crassa
分子名称: Maltodextrin-binding protein,Gasdermin-like protein rcd-1-1, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Li, Y, Hou, Y.J, Ding, J.
登録日2023-07-04
公開日2024-05-08
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 384, 2024
7CY8
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BU of 7cy8 by Molmil
Crystal Structure of CMD1 in complex with 5mC-DNA and vitamin C
分子名称: 1,2-ETHANEDIOL, ASCORBIC ACID, DNA (5'-D(P*(5CM)P*GP*CP*GP*CP*GP*GP*GP*A)-3'), ...
著者Li, W, Zhang, T, Sun, M, Ding, J.
登録日2020-09-03
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
6WBH
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BU of 6wbh by Molmil
Crystal structure of mRECK(CC4) in fusion with engineered MBP at medium resolution
分子名称: CHLORIDE ION, Maltodextrin-binding protein,Reversion-inducing cysteine-rich protein with Kazal motifs fusion, ZINC ION, ...
著者Chang, T.H, Hsieh, F.L, Gabelli, S.B, Nathans, J.
登録日2020-03-26
公開日2020-06-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.455 Å)
主引用文献Structure of the RECK CC domain, an evolutionary anomaly.
Proc.Natl.Acad.Sci.USA, 117, 2020
4GIZ
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BU of 4giz by Molmil
Crystal structure of full-length human papillomavirus oncoprotein E6 in complex with LXXLL peptide of ubiquitin ligase E6AP at 2.55 A resolution
分子名称: Maltose-binding periplasmic protein, UBIQUITIN LIGASE EA6P: chimeric protein, Protein E6, ...
著者McEwen, A.G, Zanier, K, Charbonnier, S, Poussin, P, Cura, V, Vande Pol, S, Trave, G, Cavarelli, J.
登録日2012-08-09
公開日2013-01-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis for hijacking of cellular LxxLL motifs by papillomavirus E6 oncoproteins.
Science, 339, 2013
8JRN
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BU of 8jrn by Molmil
Structure of E6AP-E6 complex in Att1 state
分子名称: Protein E6, Ubiquitin-protein ligase E3A, ZINC ION
著者Wang, Z, Yu, X.
登録日2023-06-17
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural insights into the functional mechanism of the ubiquitin ligase E6AP.
Nat Commun, 15, 2024
7U0G
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BU of 7u0g by Molmil
structure of LIN28b nucleosome bound 3 OCT4
分子名称: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2022-02-18
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023

 

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