Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1B9K
DownloadVisualize
BU of 1b9k by Molmil
ALPHA-ADAPTIN APPENDAGE DOMAIN, FROM CLATHRIN ADAPTOR AP2
Descriptor: PROTEIN (ALPHA-ADAPTIN APPENDAGE DOMAIN)
Authors:Owen, D.J, Evans, P.R.
Deposit date:1999-02-11
Release date:1999-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A structural explanation for the binding of multiple ligands by the alpha-adaptin appendage domain.
Cell(Cambridge,Mass.), 97, 1999
1BED
DownloadVisualize
BU of 1bed by Molmil
STRUCTURE OF DISULFIDE OXIDOREDUCTASE
Descriptor: DSBA OXIDOREDUCTASE
Authors:Hu, S.-H, Martin, J.L.
Deposit date:1996-09-16
Release date:1997-10-08
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of TcpG, the DsbA protein folding catalyst from Vibrio cholerae.
J.Mol.Biol., 268, 1997
3FDN
DownloadVisualize
BU of 3fdn by Molmil
Structure-based drug design of novel Aurora kinase A inhibitors: Structure basis for potency and specificity
Descriptor: N-[3-(acetylamino)phenyl]-5-{(2E)-2-[(4-methoxyphenyl)methylidene]hydrazino}-3-methyl-1H-pyrazole-4-carboxamide, Serine/threonine-protein kinase 6
Authors:Leou, J.S, Wu, J.S, Coumar, M.S, Shukla, P, Hsieh, H.P, Wu, S.Y.
Deposit date:2008-11-26
Release date:2009-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based drug design of novel Aurora kinase A inhibitors: structural basis for potency and specificity
J.Med.Chem., 52, 2009
2ROE
DownloadVisualize
BU of 2roe by Molmil
Solution structure of thermus thermophilus HB8 TTHA1718 protein in vitro
Descriptor: Heavy metal binding protein
Authors:Sakakibara, D, Sasaki, A, Ikeya, T, Hamatsu, J, Koyama, H, Mishima, M, Mikawa, T, Waelchli, M, Smith, B.O, Shirakawa, M, Guentert, P, Ito, Y.
Deposit date:2008-03-20
Release date:2009-03-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Protein structure determination in living cells by in-cell NMR spectroscopy
Nature, 458, 2009
1JRU
DownloadVisualize
BU of 1jru by Molmil
NMR STRUCTURE OF THE UBX DOMAIN FROM P47 (ENERGY MINIMISED AVERAGE)
Descriptor: p47 protein
Authors:Yuan, X.M, Shaw, A, Zhang, X.D, Kondo, H, Lally, J, Freemont, P.S, Matthews, S.J.
Deposit date:2001-08-15
Release date:2001-08-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and interaction surface of the C-terminal domain from p47: a major p97-cofactor involved in SNARE disassembly.
J.Mol.Biol., 311, 2001
5GJJ
DownloadVisualize
BU of 5gjj by Molmil
Glutathionylated hHsp70 SBD
Descriptor: Heat shock 70 kDa protein 1A
Authors:Gong, W.B, Yang, J, Zhang, H, Perrett, S.
Deposit date:2016-06-30
Release date:2017-07-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of glutathionylated hHsp70 SBD (385-641)
To Be Published
1XCI
DownloadVisualize
BU of 1xci by Molmil
Mispair Aligned N3T-Butyl-N3T Interstrand Crosslink
Descriptor: 5'-D(*CP*GP*AP*AP*AP*(TTM)P*TP*TP*TP*CP*G)-3'
Authors:da Silva, M.W, Bierbryer, R.G, Wilds, C.J, Noronha, A.M, Colvin, O.M, Miller, P.S, Gamcsik, M.P.
Deposit date:2004-09-02
Release date:2005-08-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Intrastrand base-stacking buttresses widening of major groove in interstrand cross-linked B-DNA.
Bioorg.Med.Chem., 13, 2005
1XI1
DownloadVisualize
BU of 1xi1 by Molmil
Phi29 DNA polymerase ssDNA complex, monoclinic crystal form
Descriptor: 5'-D(P*TP*TP*TP*TP*T)-3', DNA polymerase, MAGNESIUM ION
Authors:Kamtekar, S, Berman, A.J, Wang, J, Lazaro, J.M, de Vega, M, Blanco, L, Salas, M, Steitz, T.A.
Deposit date:2004-09-21
Release date:2004-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Correction of X-ray intensities from single crystals containing lattice-translocation defects
Acta Crystallogr.,Sect.D, 61, 2005
3Q8A
DownloadVisualize
BU of 3q8a by Molmil
Crystal structure of WT Protective Antigen (pH 5.5)
Descriptor: CALCIUM ION, Protective antigen
Authors:Rajapaksha, M, Lovell, S, Janowiak, B.E, Andra, K.K, Battaile, K.P, Bann, J.G.
Deposit date:2011-01-06
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.129 Å)
Cite:pH effects on binding between the anthrax protective antigen and the host cellular receptor CMG2.
Protein Sci., 21, 2012
1BGW
DownloadVisualize
BU of 1bgw by Molmil
TOPOISOMERASE RESIDUES 410-1202,
Descriptor: TOPOISOMERASE
Authors:Berger, J.M, Gamblin, S.J, Harrison, S.C, Wang, J.C.
Deposit date:1996-02-20
Release date:1996-07-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and mechanism of DNA topoisomerase II.
Nature, 379, 1996
1BFV
DownloadVisualize
BU of 1bfv by Molmil
MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI
Descriptor: ESTRIOL 3-(B-D-GLUCURONIDE), FV4155, ZINC ION
Authors:Trinh, C.H, Phillips, S.E.V.
Deposit date:1997-05-27
Release date:1997-12-03
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Antibody fragment Fv4155 bound to two closely related steroid hormones: the structural basis of fine specificity.
Structure, 5, 1997
6SEF
DownloadVisualize
BU of 6sef by Molmil
Class2C : CENP-A nucleosome in complex with CENP-C central region
Descriptor: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ...
Authors:Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
Deposit date:2019-07-29
Release date:2019-08-14
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
1XCY
DownloadVisualize
BU of 1xcy by Molmil
Structure of DNA containing the alpha-anomer of a carbocyclic abasic site
Descriptor: 5'-D(*CP*GP*TP*AP*CP*(DXD)P*CP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*GP*AP*GP*TP*AP*CP*G)-3'
Authors:de los Santos, C, El-khateeb, M, Rege, P, Tian, K, Johnson, F.
Deposit date:2004-09-03
Release date:2004-10-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Impact of the C1 configuration of abasic sites on DNA duplex structure
Biochemistry, 43, 2004
5KDO
DownloadVisualize
BU of 5kdo by Molmil
Heterotrimeric complex of the 4 alanine insertion variant of the Gi alpha1 subunit and the Gbeta1-Ggamma1
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(T) subunit gamma-T1, ...
Authors:Kaya, A.I, Lokits, A.D, Gilbert, J, Iverson, T.M, Meiler, J, Hamm, H.E.
Deposit date:2016-06-08
Release date:2016-08-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Conserved Hydrophobic Core in G alpha i1 Regulates G Protein Activation and Release from Activated Receptor.
J.Biol.Chem., 291, 2016
1BIA
DownloadVisualize
BU of 1bia by Molmil
THE E. COLI BIOTIN HOLOENZYME SYNTHETASE(SLASH)BIO REPRESSOR CRYSTAL STRUCTURE DELINEATES THE BIOTIN AND DNA-BINDING DOMAINS
Descriptor: BirA BIFUNCTIONAL PROTEIN
Authors:Wilson, K.P, Shewchuk, L.M, Matthews, B.W.
Deposit date:1992-07-06
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Escherichia coli biotin holoenzyme synthetase/bio repressor crystal structure delineates the biotin- and DNA-binding domains.
Proc.Natl.Acad.Sci.USA, 89, 1992
1XF9
DownloadVisualize
BU of 1xf9 by Molmil
Structure of NBD1 from murine CFTR- F508S mutant
Descriptor: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, ...
Authors:Thibodeau, P.H, Brautigam, C.A, Machius, M, Thomas, P.J.
Deposit date:2004-09-14
Release date:2004-12-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Side chain and backbone contributions of Phe508 to CFTR folding.
Nat.Struct.Mol.Biol., 12, 2005
1BDR
DownloadVisualize
BU of 1bdr by Molmil
HIV-1 (2: 31, 33-37) PROTEASE COMPLEXED WITH INHIBITOR SB203386
Descriptor: (2R,4S,5S,1'S)-2-PHENYLMETHYL-4-HYDROXY-5-(TERT-BUTOXYCARBONYL)AMINO-6-PHENYL HEXANOYL-N-(1'-IMIDAZO-2-YL)-2'-METHYLPROPANAMIDE, HIV-1 PROTEASE
Authors:Swairjo, M.A, Abdel-Meguid, S.S.
Deposit date:1998-05-10
Release date:1998-10-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural role of the 30's loop in determining the ligand specificity of the human immunodeficiency virus protease.
Biochemistry, 37, 1998
1BDQ
DownloadVisualize
BU of 1bdq by Molmil
HIV-1 (2:31-37, 47, 82) PROTEASE COMPLEXED WITH INHIBITOR SB203386
Descriptor: (2R,4S,5S,1'S)-2-PHENYLMETHYL-4-HYDROXY-5-(TERT-BUTOXYCARBONYL)AMINO-6-PHENYL HEXANOYL-N-(1'-IMIDAZO-2-YL)-2'-METHYLPROPANAMIDE, HIV-1 PROTEASE
Authors:Swairjo, M.A, Abdel-Meguid, S.S.
Deposit date:1998-05-10
Release date:1998-08-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural role of the 30's loop in determining the ligand specificity of the human immunodeficiency virus protease.
Biochemistry, 37, 1998
5JTQ
DownloadVisualize
BU of 5jtq by Molmil
The structure of chaperone SecB in complex with unstructured MBP binding site d
Descriptor: Maltose-binding periplasmic protein, Protein-export protein SecB
Authors:Huang, C, Saio, T, Rossi, P, Kalodimos, C.G.
Deposit date:2016-05-09
Release date:2016-08-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for the antifolding activity of a molecular chaperone.
Nature, 537, 2016
5JDL
DownloadVisualize
BU of 5jdl by Molmil
Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 2.5 mM Na+ and 1mM Sr2+
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, PENTADECANE, ...
Authors:Liao, J, Jiang, Y.X, Faraldo-Gomez, J.D.
Deposit date:2016-04-17
Release date:2016-05-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.904 Å)
Cite:Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger.
Nat.Struct.Mol.Biol., 23, 2016
1HZL
DownloadVisualize
BU of 1hzl by Molmil
SOLUTION STRUCTURES OF C-1027 APOPROTEIN AND ITS COMPLEX WITH THE AROMATIZED CHROMOPHORE
Descriptor: C-1027 APOPROTEIN, C-1027 AROMATIZED CHROMOPHORE
Authors:Tanaka, T, Fukuda-Ishisaka, S, Hirama, M, Otani, T.
Deposit date:2001-01-25
Release date:2001-05-23
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structures of C-1027 apoprotein and its complex with the aromatized chromophore.
J.Mol.Biol., 309, 2001
5JEQ
DownloadVisualize
BU of 5jeq by Molmil
Fragment of nitrate/nitrite sensor histidine kinase NarQ (R50K) in symmetric apo state
Descriptor: Nitrate/nitrite sensor protein NarQ, PHOSPHATE ION
Authors:Gushchin, I, Melnikov, I, Polovinkin, V, Ishchenko, A, Popov, A, Gordeliy, V.
Deposit date:2016-04-18
Release date:2017-05-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of transmembrane signaling by sensor histidine kinases.
Science, 356, 2017
6SYT
DownloadVisualize
BU of 6syt by Molmil
Structure of the SMG1-SMG8-SMG9 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, MAGNESIUM ION, ...
Authors:Gat, Y, Schuller, J.M, Conti, E.
Deposit date:2019-10-01
Release date:2019-12-11
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:InsP6binding to PIKK kinases revealed by the cryo-EM structure of an SMG1-SMG8-SMG9 complex.
Nat.Struct.Mol.Biol., 26, 2019
1BH7
DownloadVisualize
BU of 1bh7 by Molmil
A LOW ENERGY STRUCTURE FOR THE FINAL CYTOPLASMIC LOOP OF BAND 3, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: BAND 3
Authors:Askin, D, Bloomberg, G.B, Chambers, E.J, Tanner, M.J.A.
Deposit date:1998-06-16
Release date:1998-11-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR solution structure of a cytoplasmic surface loop of the human red cell anion transporter, band 3.
Biochemistry, 37, 1998
3CJS
DownloadVisualize
BU of 3cjs by Molmil
Minimal Recognition Complex between PrmA and Ribosomal Protein L11
Descriptor: 1,2-ETHANEDIOL, 50S ribosomal protein L11, Ribosomal protein L11 methyltransferase
Authors:Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2008-03-13
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase.
Structure, 16, 2008

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon