PDB: 48062 resultsInfo pagesStatus searchChemie searchBIRD

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5TJ4	Gasdermin-B C-terminal domain containing the polymorphism residues Gly299:Pro306 fused to maltose binding protein Descriptor: SODIUM ION, Sugar ABC transporter substrate-binding protein,Gasdermin-B fusion protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose Authors: Chao, L.K, Herzberg, O. Deposit date: 2016-10-03 Release date: 2017-02-01 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Gene polymorphism linked to increased asthma and IBD risk alters gasdermin-B structure, a sulfatide and phosphoinositide binding protein. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TMN	Slow-and fast-binding inhibitors of thermolysin display different modes of binding. crystallographic analysis of extended phosphonamidate transition-state analogues Descriptor: CALCIUM ION, N-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-L-leucyl-L-leucine, THERMOLYSIN, ... Authors: Holden, H.M, Tronrud, D.E, Monzingo, A.F, Weaver, L.H, Matthews, B.W. Deposit date: 1987-06-29 Release date: 1989-01-09 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Slow- and fast-binding inhibitors of thermolysin display different modes of binding: crystallographic analysis of extended phosphonamidate transition-state analogues. Biochemistry, 26, 1987
1UGJ	Solution structure of a murine hypothetical protein from RIKEN cDNA 2310057J16 Descriptor: RIKEN cDNA 2310057J16 protein Authors: Nagashima, T, Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2003-06-16 Release date: 2004-08-03 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structure of a murine hypothetical protein from RIKEN cDNA 2310057J16 To be Published
5T1O	Solution-state NMR and SAXS structural ensemble of NPr (1-85) in complex with EIN-Ntr (170-424) Descriptor: Phosphocarrier protein NPr, Phosphoenolpyruvate-protein phosphotransferase PtsP Authors: Strickland, M, Stanley, A.M, Wang, G, Schwieters, C.D, Buchanan, S, Peterkofsky, A, Tjandra, N. Deposit date: 2016-08-19 Release date: 2016-11-16 Last modified: 2024-05-15 Method: SOLUTION NMR, SOLUTION SCATTERING Cite: Structure of the NPr:EIN(Ntr) Complex: Mechanism for Specificity in Paralogous Phosphotransferase Systems. Structure, 24, 2016
1UBC	Structure of Reca Protein Descriptor: RecA Authors: Datta, S, Krishna, R, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M. Deposit date: 2003-04-04 Release date: 2003-07-22 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.8 Å) Cite: Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes J.BACTERIOL., 185, 2003
5TP6	Solution structure of the CaM34 with the iNOS CaM binding domain peptide Descriptor: Calmodulin, Nitric oxide synthase, inducible Authors: Piazza, M, Dieckmann, T, Guillemette, J.G. Deposit date: 2016-10-19 Release date: 2017-09-27 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Consequences of Calmodulin EF Hand Mutations. Biochemistry, 56, 2017
5TRC	Crystal structure of phosphorylated AC3-AC5 domains of yeast acetyl-CoA carboxylase Descriptor: Acetyl-CoA carboxylase, CHLORIDE ION Authors: Wei, J, Tong, L. Deposit date: 2016-10-26 Release date: 2016-12-07 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.9 Å) Cite: A unified molecular mechanism for the regulation of acetyl-CoA carboxylase by phosphorylation. Cell Discov, 2, 2016
1UDV	Crystal structure of the hyperthermophilic archaeal dna-binding protein Sso10b2 at 1.85 A Descriptor: DNA binding protein SSO10b, ZINC ION Authors: Chou, C.-C, Lin, T.-W, Chen, C.-Y, Wang, A.H.J. Deposit date: 2003-05-07 Release date: 2003-08-05 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Crystal structure of the hyperthermophilic archaeal DNA-binding protein Sso10b2 at a resolution of 1.85 Angstroms J.BACTERIOL., 185, 2003
5TZ0	Structure of the Fremyella diplosiphon Fluorescence Recovery Protein Descriptor: Fluorescence Recovery Protein Authors: Sutter, M, Pawlowski, E.G, Kerfeld, C.A. Deposit date: 2016-11-21 Release date: 2017-07-19 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.025 Å) Cite: Additional families of orange carotenoid proteins in the photoprotective system of cyanobacteria. Nat Plants, 3, 2017
5TSN	Crystal structures of Norwalk virus polymerase bound to an RNA primer-template duplex Descriptor: MANGANESE (II) ION, Norwalk virus polymerase, RNA (5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3') Authors: Shaik, M.M, Ng, K.K. Deposit date: 2016-10-30 Release date: 2017-04-12 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Norovirus RNA-dependent RNA polymerase: A computational study of metal-binding preferences. Proteins, 85, 2017
5U1A	Ferritin with Gc MtrE loop 1 inserted at His34 Descriptor: CHLORIDE ION, FE (III) ION, Ferritin,MtrE protein chimera, ... Authors: Wang, S. Deposit date: 2016-11-28 Release date: 2017-10-11 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure-based design of ferritin nanoparticle immunogens displaying antigenic loops of Neisseria gonorrhoeae. FEBS Open Bio, 7, 2017
5TVR	JMJD2A in complex with Ni(II) and alpha-Ketoglutarate Descriptor: 2-OXOGLUTARIC ACID, Lysine-specific demethylase 4A, NICKEL (II) ION, ... Authors: Cascella, B, Lee, S.G, Jez, J.M. Deposit date: 2016-11-09 Release date: 2017-02-01 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.093 Å) Cite: The small molecule JIB-04 disrupts O2 binding in the Fe-dependent histone demethylase KDM4A/JMJD2A. Chem. Commun. (Camb.), 53, 2017
5TXL	STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG) P*CP*GP*CP*CP*GP)-3'), ... Authors: Das, K, Martinez, S.M, Arnold, E. Deposit date: 2016-11-17 Release date: 2017-04-05 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.501 Å) Cite: Structural Insights into HIV Reverse Transcriptase Mutations Q151M and Q151M Complex That Confer Multinucleoside Drug Resistance. Antimicrob. Agents Chemother., 61, 2017
1UCC	Crystal structure of the Ribonuclease MC1 from bitter gourd seeds complexed with 3'-UMP. Descriptor: 3'-URIDINEMONOPHOSPHATE, Ribonuclease MC Authors: Suzuki, A, Yao, M, Tanaka, I, Numata, T, Kikukawa, S, Yamasaki, N, Kimura, M. Deposit date: 2003-04-10 Release date: 2003-04-29 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Crystal structures of the ribonuclease MC1 from bitter gourd seeds, complexed with 2'-UMP or 3'-UMP, reveal structural basis for uridine specificity Biochem.Biophys.Res.Commun., 275, 2000
1TSK	SCORPION TOXIN (TS KAPPA) FROM TITYUS SERRULATUS ACTIVE ON SMALL CONDUCTANCE POTASSIUM CHANNEL, NMR, 30 STRUCTURES Descriptor: TS KAPA Authors: Blanc, E, Darbon, H. Deposit date: 1997-02-05 Release date: 1997-08-12 Last modified: 2022-03-02 Method: SOLUTION NMR Cite: Solution structure of TsKapa, a charybdotoxin-like scorpion toxin from Tityus serrulatus with high affinity for apamin-sensitive Ca(2+)-activated K+ channels. Proteins, 29, 1997
1TRU	THE HIGH-RESOLUTION THREE-DIMENSIONAL SOLUTION STRUCTURES OF THE OXIDIZED AND REDUCED STATES OF HUMAN THIOREDOXIN Descriptor: THIOREDOXIN Authors: Clore, G.M, Qin, J, Gronenborn, A.M. Deposit date: 1994-05-10 Release date: 1994-09-30 Last modified: 2022-03-02 Method: SOLUTION NMR Cite: The high-resolution three-dimensional solution structures of the oxidized and reduced states of human thioredoxin. Structure, 2, 1994
1TRW	THE HIGH-RESOLUTION THREE-DIMENSIONAL SOLUTION STRUCTURES OF THE OXIDIZED AND REDUCED STATES OF HUMAN THIOREDOXIN Descriptor: THIOREDOXIN Authors: Clore, G.M, Qin, J, Gronenborn, A.M. Deposit date: 1994-05-10 Release date: 1994-09-30 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: The high-resolution three-dimensional solution structures of the oxidized and reduced states of human thioredoxin. Structure, 2, 1994
5U4W	Cryo-EM Structure of Immature Zika Virus Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, E protein, M protein, ... Authors: Mangala Prasad, V, Miller, A.S, Klose, T, Sirohi, D, Buda, G, Jiang, W, Kuhn, R.J, Rossmann, M.G. Deposit date: 2016-12-06 Release date: 2017-01-11 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (9.1 Å) Cite: Structure of the immature Zika virus at 9 angstrom resolution. Nat. Struct. Mol. Biol., 24, 2017
1TOP	STRUCTURE OF CHICKEN SKELETAL MUSCLE TROPONIN-C AT 1.78 ANGSTROMS RESOLUTION Descriptor: CALCIUM ION, SULFATE ION, TROPONIN C Authors: Sundaralingam, M. Deposit date: 1993-08-11 Release date: 1994-01-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Structure of chicken skeletal muscle troponin C at 1.78 A resolution. Acta Crystallogr.,Sect.D, 50, 1994
5TWQ	Post-catalytic nicked complex of human Polymerase Mu with newly incorporated UTP Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ... Authors: Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C. Deposit date: 2016-11-14 Release date: 2017-07-05 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu. Nucleic Acids Res., 45, 2017
5TXP	STRUCTURE OF Q151M complex (A62V, V75I, F77L, F116Y, Q151M) mutant HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DDATP Descriptor: 1,2-ETHANEDIOL, 2',3'-dideoxyadenosine triphosphate, DNA (5'-D(*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*G)-3'), ... Authors: Das, K, Martinez, S.M, Arnold, E. Deposit date: 2016-11-17 Release date: 2017-04-05 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural Insights into HIV Reverse Transcriptase Mutations Q151M and Q151M Complex That Confer Multinucleoside Drug Resistance. Antimicrob. Agents Chemother., 61, 2017
5U5Z	CcP gateless cavity Descriptor: 4-methyl-2-phenyl-1H-imidazole, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase Authors: Fischer, M, Shoichet, B.K. Deposit date: 2016-12-07 Release date: 2017-02-01 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.26 Å) Cite: Testing inhomogeneous solvation theory in structure-based ligand discovery. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TPB	Binding domain of BoNT/A complexed with ganglioside variant Descriptor: Botulinum neurotoxin type A, N-acetyl-alpha-neuraminic acid, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose Authors: Berntsson, R.P.-A, Svensson, L.M, Stenmark, P. Deposit date: 2016-10-20 Release date: 2017-01-18 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Glycans Confer Specificity to the Recognition of Ganglioside Receptors by Botulinum Neurotoxin A. J. Am. Chem. Soc., 139, 2017
5U1R	Structure of human MR1-diclofenac in complex with human MAIT A-F7 TCR Descriptor: 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID, ACETATE ION, Beta-2-microglobulin, ... Authors: Keller, A.N, Rossjohn, J. Deposit date: 2016-11-28 Release date: 2017-03-15 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Drugs and drug-like molecules can modulate the function of mucosal-associated invariant T cells. Nat. Immunol., 18, 2017
1TYP	SUBSTRATE INTERACTIONS BETWEEN TRYPANOTHIONE REDUCTASE AND N1-GLUTATHIONYLSPERMIDINE DISULPHIDE AT 0.28-NM RESOLUTION Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... Authors: Bailey, S, Hunter, W.N. Deposit date: 1992-06-29 Release date: 1994-01-31 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Substrate interactions between trypanothione reductase and N1-glutathionylspermidine disulphide at 0.28-nm resolution. Eur.J.Biochem., 213, 1993

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