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8SPX
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BU of 8spx by Molmil
PS3 F1 Rotorless, high ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Sobti, M, Stewart, A.G.
Deposit date:2023-05-03
Release date:2024-01-24
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:The series of conformational states adopted by rotorless F 1 -ATPase during its hydrolysis cycle.
Structure, 32, 2024
8HKG
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BU of 8hkg by Molmil
Crystal structure of glycosidic hydrolase family 10 (GH10) xylanase XynA contains an additional proline-rich sequence in the C-terminus
Descriptor: xylanase
Authors:Dong, R.Y, Tu, T.
Deposit date:2022-11-26
Release date:2023-02-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Effectiveness of ruminal xylanase with an extra proline-rich C-terminus on lignocellulosic biomass degradation.
Bioresour Technol, 372, 2023
8SWK
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BU of 8swk by Molmil
Cryo-EM structure of NLRP3 closed hexamer
Descriptor: 1-[4-(2-oxidanylpropan-2-yl)furan-2-yl]sulfonyl-3-(1,2,3,5-tetrahydro-s-indacen-4-yl)urea, ADENOSINE-5'-TRIPHOSPHATE, NACHT, ...
Authors:Yu, X, Matico, R.E, Miller, R, Schoubroeck, B.V, Grauwen, K, Suarez, J, Pietrak, B, Haloi, N, Yin, Y, Tresadern, G.J, Perez-Benito, L, Lindahl, E, Bottelbergs, A, Oehlrich, D, Opdenbosch, N.V, Sharma, S.
Deposit date:2023-05-18
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (4.32 Å)
Cite:Cryo-EM structures of NLRP3 reveal its self-activation mechanism
Nat Commun, 2024
8H68
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BU of 8h68 by Molmil
Crystal structure of Caenorhabditis elegans NMAD-1 in complex with NOG and Mg(II)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Shi, Y, Ding, J, Yang, H.
Deposit date:2022-10-16
Release date:2023-02-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Caenorhabditis elegans NMAD-1 functions as a demethylase for actin.
J Mol Cell Biol, 15, 2023
8HHS
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BU of 8hhs by Molmil
Structure of human apoferritin embedded in crystalline ice
Descriptor: Ferritin heavy chain
Authors:Shi, H, Wu, C, Zhang, X.
Deposit date:2022-11-17
Release date:2023-02-15
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Addressing compressive deformation of proteins embedded in crystalline ice.
Structure, 31, 2023
8HIL
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BU of 8hil by Molmil
A cryo-EM structure of B. oleracea RNA polymerase V at 3.57 Angstrom
Descriptor: DNA-dependent RNA polymerase IV and V subunit 2, DNA-directed RNA polymerase V largest subunit, DNA-directed RNA polymerase subunit, ...
Authors:Du, X, Xie, G, Hu, H, Du, J.
Deposit date:2022-11-20
Release date:2023-03-22
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Structure and mechanism of the plant RNA polymerase V.
Science, 379, 2023
8SXN
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BU of 8sxn by Molmil
Structure of NLRP3 and NEK7 complex
Descriptor: 1-[4-(2-oxidanylpropan-2-yl)furan-2-yl]sulfonyl-3-(1,2,3,5-tetrahydro-s-indacen-4-yl)urea, ADENOSINE-5'-TRIPHOSPHATE, NACHT, ...
Authors:Yu, X, Matico, R.E, Miller, R, Schoubroeck, B.V, Grauwen, K, Suarez, J, Pietrak, B, Haloi, N, Yin, Y, Tresadern, G.J, Perez-Benito, L, Lindahl, E, Bottelbergs, A, Oehlrich, D, Opdenbosch, N.V, Sharma, S.
Deposit date:2023-05-22
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Cryo-EM structures of NLRP3 reveal its self-activation mechanism
Nat Commun, 2024
8SWF
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BU of 8swf by Molmil
Cryo-EM structure of NLRP3 open octamer
Descriptor: NACHT, LRR and PYD domains-containing protein 3
Authors:Yu, X, Matico, R.E, Miller, R, Schoubroeck, B.V, Grauwen, K, Suarez, J, Pietrak, B, Haloi, N, Yin, Y, Tresadern, G.J, Perez-Benito, L, Lindahl, E, Bottelbergs, A, Oehlrich, D, Opdenbosch, N.V, Sharma, S.
Deposit date:2023-05-18
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Cryo-EM structures of NLRP3 reveal its self-activation mechanism
Nat Commun, 2024
8H3W
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BU of 8h3w by Molmil
Crystal structure of chicken egg lysozyme at ambient temperature
Descriptor: Lysozyme C
Authors:DeMirci, H.
Deposit date:2022-10-09
Release date:2023-03-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Rapid and efficient ambient temperature X-ray crystal structure determination at Turkish Light Source.
Sci Rep, 13, 2023
8SZH
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BU of 8szh by Molmil
Cryo-EM structure of cinacalcet-bound human calcium-sensing receptor CaSR-Gi complex in lipid nanodiscs
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:He, F, Wu, C, Gao, Y, Skiniotis, G.
Deposit date:2023-05-29
Release date:2024-02-07
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Allosteric modulation and G-protein selectivity of the Ca 2+ -sensing receptor.
Nature, 626, 2024
8HLA
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BU of 8hla by Molmil
Heteromeric ring comprised of peroxiredoxin from Thermococcus kodakaraensis (TkPrx) F42C/C46S/C205S/C211S mutant modified with 2-(bromoacetyl)naphthalene (Naph@TkPrx*F42C) and TkPrx C46S/F76C/C205S/C211S mutant modified with 2-(bromoacetyl)naphthalene (Naph@TkPrx*F76C) (Naph@(MIX|3:3))
Descriptor: 1-naphthalen-2-ylethanone, Peroxiredoxin
Authors:Himiyama, T, Hamaguchi, T, Yonekura, K, Nakamura, T.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Unnaturally Distorted Hexagonal Protein Ring Alternatingly Reorganized from Two Distinct Chemically Modified Proteins.
Bioconjug.Chem., 2023
8HIM
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BU of 8him by Molmil
A cryo-EM structure of B. oleracea RNA polymerase V elongation complex at 2.73 Angstrom
Descriptor: DNA (34-MER), DNA-directed RNA polymerase IV and V subunit 2, DNA-directed RNA polymerase V largest subunit, ...
Authors:Hu, H, Xie, G, Du, X, Du, J.
Deposit date:2022-11-21
Release date:2023-03-22
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure and mechanism of the plant RNA polymerase V.
Science, 379, 2023
8SGP
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BU of 8sgp by Molmil
human liver mitochondrial Medium-chain specific acyl-CoA dehydrogenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
Authors:Zhang, Z.
Deposit date:2023-04-12
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SGR
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BU of 8sgr by Molmil
human liver mitochondrial Isovaleryl-CoA dehydrogenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Isovaleryl-CoA dehydrogenase, mitochondrial
Authors:Zhang, Z.
Deposit date:2023-04-13
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SGS
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BU of 8sgs by Molmil
human liver mitochondrial Short-chain specific acyl-CoA dehydrogenase
Descriptor: COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, Short-chain specific acyl-CoA dehydrogenase, ...
Authors:Zhang, Z.
Deposit date:2023-04-13
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8S32
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BU of 8s32 by Molmil
GroEL with bound GroTAC peptide
Descriptor: Chaperonin GroEL, GroTAC
Authors:Wroblewski, K, Izert-Nowakowska, M.A, Goral, T.K, Klimecka, M.M, Kmiecik, S, Gorna, M.W.
Deposit date:2024-02-19
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (2.45 Å)
Cite:Depletion of essential GroEL protein in Escherichia coli using Clp-Interacting Peptidic Protein Erasers (CLIPPERs)
To Be Published
8HCT
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BU of 8hct by Molmil
Crystal structure of Cu2+ binding to Dendrorhynchus zhejiangensis ferritin
Descriptor: COPPER (II) ION, FE (III) ION, Ferritin, ...
Authors:Ming, T.H, Su, X.R, Huo, C.H.
Deposit date:2022-11-03
Release date:2023-03-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural and Biochemical Characterization of Silver/Copper Binding by Dendrorhynchus zhejiangensis Ferritin.
Polymers (Basel), 15, 2023
8SG4
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BU of 8sg4 by Molmil
E1435Q Ycf1 mutant in dephosphorylated state
Descriptor: Metal resistance protein YCF1
Authors:Khandelwal, N.K, Tomasiak, T.M.
Deposit date:2023-04-11
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:E1435Q Ycf1 mutant in dephosphorylated state
To Be Published
8RZV
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BU of 8rzv by Molmil
Structure of UP1 S4ES6E phosphomimetic mutant in complex with human telomeric repeat DNA
Descriptor: DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed
Authors:Dunnett, L, Prischi, F.
Deposit date:2024-02-13
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structure of UP1 S4ES6E phosphomimetic mutant in complex with human telomeric repeat DNA
To Be Published
8H02
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BU of 8h02 by Molmil
Crystal structure of Synechococcus elongatus PCC 7942 RNA polymerase SI3-tail
Descriptor: DNA-directed RNA polymerase subunit beta'
Authors:Shen, L.Q, Zhang, Y.
Deposit date:2022-09-27
Release date:2023-04-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.552 Å)
Cite:An SI3-sigma arch stabilizes cyanobacteria transcription initiation complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
8SD8
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BU of 8sd8 by Molmil
Carbonic anhydrase II radiation damage RT 91-120
Descriptor: Carbonic anhydrase 2, ZINC ION
Authors:Combs, J.E, Mckenna, R.
Deposit date:2023-04-06
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.789 Å)
Cite:XFEL structure of carbonic anhydrase II: a comparative study of XFEL, NMR, X-ray and neutron structures.
Acta Crystallogr D Struct Biol, 80, 2024
8SXF
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BU of 8sxf by Molmil
The C-terminal protease CtpA-LbcA complex of pseudomonas aeruginosa with the TPR at the high position
Descriptor: Probable carboxyl-terminal protease, TPR repeat-containing protein PA4667, polyA
Authors:Hsu, H.-C, Li, H.
Deposit date:2023-05-22
Release date:2024-03-06
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:P. aeruginosa CtpA protease adopts a novel activation mechanism to initiate the proteolytic process.
Embo J., 43, 2024
8SNF
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BU of 8snf by Molmil
Crystal structure of metformin hydrolase (MfmAB) from Pseudomonas mendocina sp. MET-2 with Ni2+2 bound
Descriptor: NICKEL (II) ION, metformin hydrolase subunit A, metformin hydrolase subunit B
Authors:Tassoulas, L.J, Rankin, J.A, Elias, M.H, Wackett, L.P.
Deposit date:2023-04-27
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dinickel enzyme evolved to metabolize the pharmaceutical metformin and its implications for wastewater and human microbiomes.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SXG
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BU of 8sxg by Molmil
The C-terminal protease CtpA-LbcA complex of pseudomonas aeruginosa with the TPR at the low position
Descriptor: Probable carboxyl-terminal protease, TPR repeat-containing protein PA4667, unidentified peptide
Authors:Hsu, H.-C, Li, H.
Deposit date:2023-05-22
Release date:2024-03-06
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:P. aeruginosa CtpA protease adopts a novel activation mechanism to initiate the proteolytic process.
Embo J., 43, 2024
8T0Z
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BU of 8t0z by Molmil
Human liver-type glutaminase (K253A) with L-Gln, filamentous form
Descriptor: GLUTAMINE, Glutaminase liver isoform, mitochondrial
Authors:Feng, S, Aplin, C, Nguyen, T.-T.T, Milano, S.K, Cerione, R.A.
Deposit date:2023-06-01
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Filament formation drives catalysis by glutaminase enzymes important in cancer progression.
Nat Commun, 15, 2024

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PDB entries from 2024-08-14

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