PDB: 19129 resultsInfo pagesStatus searchChemie searchBIRD

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7ZNJ	Structure of an ALYREF-exon junction complex hexamer Descriptor: Eukaryotic initiation factor 4A-III, N-terminally processed, MAGNESIUM ION, ... Authors: Pacheco-Fiallos, F.B, Vorlaender, M.K, Plaschka, C. Deposit date: 2022-04-21 Release date: 2023-04-12 Last modified: 2023-05-24 Method: ELECTRON MICROSCOPY (2.4 Å) Cite: mRNA recognition and packaging by the human transcription-export complex. Nature, 616, 2023
6E3R	Structure of human DNA polymerase beta complexed with 8OA as the template base in a 1-nucleotide gapped DNA Descriptor: DNA (5'-D(*CP*CP*GP*AP*CP*(A38) P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... Authors: Koag, M.-C, Lee, S. Deposit date: 2018-07-14 Release date: 2019-04-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.26 Å) Cite: Mutagenic Replication of the Major Oxidative Adenine Lesion 7,8-Dihydro-8-oxoadenine by Human DNA Polymerases. J. Am. Chem. Soc., 141, 2019
6E3V	Structure of human DNA polymerase beta complexed with 8OA in the template base paired with incoming non-hydrolyzable TTP Descriptor: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*CP*GP*AP*CP*(A38) P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... Authors: Koag, M.-C, Lee, S. Deposit date: 2018-07-15 Release date: 2019-04-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Mutagenic Replication of the Major Oxidative Adenine Lesion 7,8-Dihydro-8-oxoadenine by Human DNA Polymerases. J. Am. Chem. Soc., 141, 2019
6E3W	Structure of human DNA polymerase beta complexed with 8OA in the template base paired with incoming non-hydrolyzable GTP Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*CP*GP*AP*CP*(A38) P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... Authors: Koag, M.-C, Lee, S. Deposit date: 2018-07-15 Release date: 2019-04-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Mutagenic Replication of the Major Oxidative Adenine Lesion 7,8-Dihydro-8-oxoadenine by Human DNA Polymerases. J. Am. Chem. Soc., 141, 2019
5X1E	Structure of DotL(656-783)-IcmS-IcmW derived from Legionella pneumophila Descriptor: IcmO (DotL), IcmS, IcmW Authors: Kim, J.D, Kwak, M.J, Oh, B.H. Deposit date: 2017-01-25 Release date: 2017-06-14 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.999 Å) Cite: Architecture of the type IV coupling protein complex of Legionella pneumophila Nat Microbiol, 2, 2017
6EJJ	Structure of a glycosyltransferase / state 2 Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-glucopyranose, CHLORIDE ION, NerylNeryl pyrophosphate, ... Authors: Ramirez, A.S, Boilevin, J, Mehdipour, A.R, Hummer, G, Darbre, T, Reymond, J.L, Locher, K.P. Deposit date: 2017-09-21 Release date: 2018-02-07 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural basis of the molecular ruler mechanism of a bacterial glycosyltransferase. Nat Commun, 9, 2018
3LH5	Crystal Structure of the SH3-Guanylate kinase core domain of ZO-1 Descriptor: Tight junction protein ZO-1 Authors: Lye, M.F, Lavie, A. Deposit date: 2010-01-21 Release date: 2010-03-02 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Insights into regulated ligand binding sites from the structure of ZO-1 Src homology 3-guanylate kinase module. J.Biol.Chem., 285, 2010
2SNS	STAPHYLOCOCCAL NUCLEASE. PROPOSED MECHANISM OF ACTION BASED ON STRUCTURE OF ENZYME-THYMIDINE 3(PRIME),5(PRIME)-BIPHOSPHATE-CALCIUM ION COMPLEX AT 1.5-ANGSTROMS RESOLUTION Descriptor: CALCIUM ION, THERMONUCLEASE PRECURSOR, THYMIDINE-3',5'-DIPHOSPHATE Authors: Legg, M.J, Cotton, F.A, Hazen Jr, E.E. Deposit date: 1982-05-14 Release date: 1982-07-29 Last modified: 2017-11-29 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Thesis, Texas Agricultural and Mechanical University, 1977
4PFE	Crystal structure of vsfGFP-0 Descriptor: Green fluorescent protein Authors: Jauch, R, Chen, S.L. Deposit date: 2014-04-29 Release date: 2015-06-24 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.603 Å) Cite: Rational Structure-Based Design of Bright GFP-Based Complexes with Tunable Dimerization. Angew.Chem.Int.Ed.Engl., 54, 2015
2GG2	Novel bacterial methionine aminopeptidase inhibitors Descriptor: 5-IMINO-4-(3-TRIFLUOROMETHYL-PHENYLAZO)-5H-PYRAZOL-3-YLAMINE, COBALT (II) ION, Methionine aminopeptidase, ... Authors: Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M. Deposit date: 2006-03-23 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1 Å) Cite: Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors. Proteins, 66, 2007
2GAQ	NMR SOLUTION STRUCTURE OF THE FRB DOMAIN OF mTOR Descriptor: FKBP12-rapamycin complex-associated protein Authors: Leone, M, Pellecchia, M. Deposit date: 2006-03-09 Release date: 2006-08-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: The FRB Domain of mTOR: NMR Solution Structure and Inhibitor Design. Biochemistry, 45, 2006
2GG0	Novel bacterial methionine aminopeptidase inhibitors Descriptor: COBALT (II) ION, METHYL N-{(2S,3R)-3-AMINO-2-HYDROXY-3-[4-(TRIFLUOROMETHYL)PHENYL]PROPANOYL}ALANYLGLYCINATE, Methionine aminopeptidase, ... Authors: Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M. Deposit date: 2006-03-23 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.28 Å) Cite: Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors. Proteins, 66, 2007
2GGB	Novel bacterial methionine aminopeptidase inhibitors Descriptor: COBALT (II) ION, METHYL N-[(2S,3R)-3-AMINO-2-HYDROXYHEPTANOYL]-L-SERYL-L-LEUCINATE, Methionine aminopeptidase, ... Authors: Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M. Deposit date: 2006-03-23 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors. Proteins, 66, 2007
2GG8	Novel bacterial methionine aminopeptidase inhibitors Descriptor: COBALT (II) ION, METHYL N-[(2S,3R)-3-AMINO-2-HYDROXY-3-(4-METHYLPHENYL)PROPANOYL]-D-ALANYL-D-LEUCINATE, Methionine aminopeptidase, ... Authors: Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M. Deposit date: 2006-03-23 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors. Proteins, 66, 2007
2GG7	Novel bacterial methionine aminopeptidase inhibitors Descriptor: 3-(5-AMINO-3-IMINO-3H-PYRAZOL-4-YLAZO)-BENZOIC ACID, COBALT (II) ION, Methionine aminopeptidase, ... Authors: Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M. Deposit date: 2006-03-23 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.12 Å) Cite: Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors. Proteins, 66, 2007
2GG5	Novel bacterial methionine aminopeptidase inhibitors Descriptor: 5-IMINO-4-(2-TRIFLUOROMETHYL-PHENYLAZO)-5H-PYRAZOL-3-YLAMINE, COBALT (II) ION, Methionine aminopeptidase, ... Authors: Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M. Deposit date: 2006-03-23 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.12 Å) Cite: Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors. Proteins, 66, 2007
2GG9	Novel bacterial methionine aminopeptidase inhibitors Descriptor: COBALT (II) ION, METHYL N-[(2S,3R)-3-AMINO-2-HYDROXY-3-(4-ISOPROPYLPHENYL)PROPANOYL]-D-ALANYL-D-LEUCINATE, Methionine aminopeptidase, ... Authors: Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M. Deposit date: 2006-03-23 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.05 Å) Cite: Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors. Proteins, 66, 2007
4PL9	Structure of the catalytic domain of ETR1 from Arabidopsis thaliana Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, CADMIUM ION, ... Authors: Panneerselvam, S, Mueller-Dieckmann, J. Deposit date: 2014-05-16 Release date: 2014-12-17 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural Model of the Cytosolic Domain of the Plant Ethylene Receptor 1 (ETR1). J.Biol.Chem., 290, 2015
2GG3	Novel bacterial methionine aminopeptidase inhibitors Descriptor: 4-(4-FLUORO-PHENYLAZO)-5-IMINO-5H-PYRAZOL-3-YLAMINE, COBALT (II) ION, Methionine aminopeptidase, ... Authors: Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M. Deposit date: 2006-03-23 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors. Proteins, 66, 2007
2GGC	Novel bacterial methionine aminopeptidase inhibitors Descriptor: COBALT (II) ION, METHIONINE, Methionine aminopeptidase, ... Authors: Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M. Deposit date: 2006-03-23 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1 Å) Cite: Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors. Proteins, 66, 2007
4Q1E	Human dCK C4S-S74E mutant in complex with UDP and the inhibitor 10 {2-{[(1R/S)-1-{2-[3-(2-fluoroethoxy)-4-methoxyphenyl]-5-methyl-1,3-thiazol 4-yl}ethyl]sulfanyl}pyrimidine-4,6-diamine} Descriptor: (R)-2-((1-(2-(3-(2-fluoroethoxy)-4-methoxyphenyl)-5-methylthiazol-4-yl)ethyl)thio)pyrimidine-4,6-diamine, (S)-2-((1-(2-(3-(2-fluoroethoxy)-4-methoxyphenyl)-5-methylthiazol-4-yl)ethyl)thio)pyrimidine-4,6-diamine, Deoxycytidine kinase, ... Authors: Nomme, J, Lavie, A. Deposit date: 2014-04-03 Release date: 2014-11-05 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structure-guided development of deoxycytidine kinase inhibitors with nanomolar affinity and improved metabolic stability. J.Med.Chem., 57, 2014
6SIH	Structure of bacterial flagellar capping protein FliD Descriptor: Flagellar hook-associated protein 2 Authors: Al-Otaibi, N.S, Farrell, D, DiMaio, F, Bergeron, J.R.C. Deposit date: 2019-08-09 Release date: 2020-05-27 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (4.7 Å) Cite: The cryo-EM structure of the bacterial flagellum cap complex suggests a molecular mechanism for filament elongation. Nat Commun, 11, 2020
5GMJ	Crystal Structure of GRASP55 GRASP domain in complex with JAM-B C-terminus Descriptor: Golgi reassembly-stacking protein 2, Junctional adhesion molecule B Authors: Shi, N, Shi, X, Morelli, X, Betzi, S, Huang, X. Deposit date: 2016-07-14 Release date: 2017-05-24 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.986 Å) Cite: Genetic, structural, and chemical insights into the dual function of GRASP55 in germ cell Golgi remodeling and JAM-C polarized localization during spermatogenesis PLoS Genet., 13, 2017
5E6F	Canarypox virus resolvase Descriptor: CNPV261 Holliday junction resolvase protein, D(-)-TARTARIC ACID, MAGNESIUM ION Authors: Li, H, Hwang, Y, Perry, K, Bushman, F.D, Van Duyne, G.D. Deposit date: 2015-10-09 Release date: 2016-03-30 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structure and Metal Binding Properties of a Poxvirus Resolvase. J.Biol.Chem., 291, 2016
7AA4	Structure of ClpC1-NTD bound to a CymA analogue Descriptor: Negative regulator of genetic competence ClpC/mecB, polymer Cyclomarin A analogue Authors: Meinhart, A, Morreale, F.E, Kaiser, M, Clausen, T. Deposit date: 2020-09-03 Release date: 2021-08-11 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.68 Å) Cite: BacPROTACs mediate targeted protein degradation in bacteria. Cell, 185, 2022

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