7XFC
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![BU of 7xfc by Molmil](/molmil-images/mine/7xfc) | Structure of nucleosome-DI complex (-30I, Apo state) | Descriptor: | DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... | Authors: | Zheng, L, Tsai, B, Gao, N. | Deposit date: | 2022-04-01 | Release date: | 2023-04-19 | Last modified: | 2023-11-08 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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4WO5
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![BU of 4wo5 by Molmil](/molmil-images/mine/4wo5) | Crystal structure of a BRAF kinase domain monomer | Descriptor: | N-{3-[(5-chloro-1H-pyrrolo[2,3-b]pyridin-3-yl)carbonyl]-2,4-difluorophenyl}propane-1-sulfonamide, Serine/threonine-protein kinase B-raf | Authors: | Critton, D.A. | Deposit date: | 2014-10-15 | Release date: | 2014-12-03 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (2.83 Å) | Cite: | Crystal structure of a BRAF kinase domain monomer explains basis for allosteric regulation. Nat.Struct.Mol.Biol., 22, 2015
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3PC8
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![BU of 3pc8 by Molmil](/molmil-images/mine/3pc8) | X-ray crystal structure of the heterodimeric complex of XRCC1 and DNA ligase III-alpha BRCT domains. | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA ligase 3, DNA repair protein XRCC1, ... | Authors: | Cuneo, M.J, Krahn, J.M, London, R.E. | Deposit date: | 2010-10-21 | Release date: | 2011-06-15 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.31 Å) | Cite: | The structural basis for partitioning of the XRCC1/DNA ligase III-{alpha} BRCT-mediated dimer complexes. Nucleic Acids Res., 39, 2011
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7XFI
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![BU of 7xfi by Molmil](/molmil-images/mine/7xfi) | Structure of nucleosome-DI complex (-50I, Apo state) | Descriptor: | DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... | Authors: | Zheng, L, Tsai, B, Gao, N. | Deposit date: | 2022-04-01 | Release date: | 2023-04-19 | Last modified: | 2023-11-08 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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7UN6
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![BU of 7un6 by Molmil](/molmil-images/mine/7un6) | Complex of UBE2O with NAP1L1 | Descriptor: | (E3-independent) E2 ubiquitin-conjugating enzyme, Nucleosome assembly protein 1-like 1 | Authors: | Yip, M.C.J, Sedor, S.F, Shao, S. | Deposit date: | 2022-04-09 | Release date: | 2022-08-03 | Last modified: | 2024-02-14 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Mechanism of client selection by the protein quality-control factor UBE2O. Nat.Struct.Mol.Biol., 29, 2022
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6PU6
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![BU of 6pu6 by Molmil](/molmil-images/mine/6pu6) | CobT from Methanocaldococcus jannaschii in complex with Alpha-Ribozole 5'-Phosphate, Nicotinic Acid, and Nicotinic Acid Mononucleotide | Descriptor: | ALPHA-RIBAZOLE-5'-PHOSPHATE, NICOTINATE MONONUCLEOTIDE, NICOTINIC ACID, ... | Authors: | Schwarzwalder, A.H, Jeter, V.L, Vecellio, A.A, Erpenbach, E, Escalante-Semerena, J.C, Rayment, I. | Deposit date: | 2019-07-17 | Release date: | 2020-07-22 | Last modified: | 2024-04-10 | Method: | X-RAY DIFFRACTION (2.293 Å) | Cite: | Structural studies of the phosphoribosyltransferase involved in cobamide biosynthesis in methanogenic archaea and cyanobacteria. Sci Rep, 12, 2022
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2BVL
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![BU of 2bvl by Molmil](/molmil-images/mine/2bvl) | Crystal structure of the catalytic domain of toxin B from Clostridium difficile in complex with UDP, Glc and manganese ion | Descriptor: | HEXATANTALUM DODECABROMIDE, MANGANESE (II) ION, SULFATE ION, ... | Authors: | Reinert, D.J, Jank, T, Aktories, K, Schulz, G.E. | Deposit date: | 2005-06-30 | Release date: | 2005-08-03 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural Basis for the Function of Clostridium Difficile Toxin B. J.Mol.Biol., 351, 2005
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4YED
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![BU of 4yed by Molmil](/molmil-images/mine/4yed) | TcdA (CsdL) | Descriptor: | ADENOSINE MONOPHOSPHATE, GLYCEROL, tRNA threonylcarbamoyladenosine dehydratase | Authors: | Kim, S, Park, S.Y. | Deposit date: | 2015-02-24 | Release date: | 2016-01-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | The Structure of Escherichia coli TcdA (Also Known As CsdL) Reveals a Novel Topology and Provides Insight into the tRNA Binding Surface Required for N(6)-Threonylcarbamoyladenosine Dehydratase Activity J.Mol.Biol., 427, 2015
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7UN3
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![BU of 7un3 by Molmil](/molmil-images/mine/7un3) | Complex of UBE2O with NAP1L1 and ubiquitylated uL2 | Descriptor: | Nucleosome assembly protein 1-like 1, Ubiquitin,60S ribosomal protein L8,(E3-independent) E2 ubiquitin-conjugating enzyme fusion | Authors: | Yip, M.C.J, Sedor, S.F, Shao, S. | Deposit date: | 2022-04-08 | Release date: | 2022-08-03 | Last modified: | 2024-02-14 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Mechanism of client selection by the protein quality-control factor UBE2O. Nat.Struct.Mol.Biol., 29, 2022
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6ZRD
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![BU of 6zrd by Molmil](/molmil-images/mine/6zrd) | |
7PT7
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![BU of 7pt7 by Molmil](/molmil-images/mine/7pt7) | Structure of MCM2-7 DH complexed with Cdc7-Dbf4 in the presence of ADP:BeF3, state I | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 7, ... | Authors: | Saleh, A, Noguchi, Y, Aramayo, R, Ivanova, M.E, Speck, C. | Deposit date: | 2021-09-26 | Release date: | 2022-06-08 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3.8 Å) | Cite: | The structural basis of Cdc7-Dbf4 kinase dependent targeting and phosphorylation of the MCM2-7 double hexamer. Nat Commun, 13, 2022
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7PT6
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![BU of 7pt6 by Molmil](/molmil-images/mine/7pt6) | Structure of MCM2-7 DH complexed with Cdc7-Dbf4 in the presence of ATPgS, state III | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 7, DDK kinase regulatory subunit DBF4, ... | Authors: | Saleh, A, Noguchi, Y, Aramayo, R, Ivanova, M.E, Speck, C. | Deposit date: | 2021-09-26 | Release date: | 2022-06-08 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | The structural basis of Cdc7-Dbf4 kinase dependent targeting and phosphorylation of the MCM2-7 double hexamer. Nat Commun, 13, 2022
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6Q16
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![BU of 6q16 by Molmil](/molmil-images/mine/6q16) | Focussed refinement of InvGN0N1:PrgHK:SpaPQR:PrgIJ from Salmonella SPI-1 injectisome NC-base | Descriptor: | Lipoprotein PrgK, Protein InvG, Protein PrgH, ... | Authors: | Hu, J, Worrall, L.J, Strynadka, N.C.J. | Deposit date: | 2019-08-02 | Release date: | 2019-10-23 | Last modified: | 2020-01-15 | Method: | ELECTRON MICROSCOPY (4.1 Å) | Cite: | T3S injectisome needle complex structures in four distinct states reveal the basis of membrane coupling and assembly. Nat Microbiol, 4, 2019
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8PEP
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![BU of 8pep by Molmil](/molmil-images/mine/8pep) | H3K36me2 nucleosome-LEDGF/p75 PWWP domain complex - pose 2 | Descriptor: | Histone H2A, Histone H2B 1.1, Histone H3, ... | Authors: | Koutna, E, Kouba, T, Veverka, V. | Deposit date: | 2023-06-14 | Release date: | 2023-08-16 | Last modified: | 2023-11-15 | Method: | ELECTRON MICROSCOPY (3.33 Å) | Cite: | Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
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6Q76
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![BU of 6q76 by Molmil](/molmil-images/mine/6q76) | |
3Q9L
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![BU of 3q9l by Molmil](/molmil-images/mine/3q9l) | The structure of the dimeric E.coli MinD-ATP complex | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Septum site-determining protein minD | Authors: | Wu, W, Park, K.-T, Lutkenhaus, J, Holyoak, T. | Deposit date: | 2011-01-08 | Release date: | 2011-01-26 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.343 Å) | Cite: | Determination of the structure of the MinD-ATP complex reveals the orientation of MinD on the membrane and the relative location of the binding sites for MinE and MinC. Mol.Microbiol., 79, 2011
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8PC5
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![BU of 8pc5 by Molmil](/molmil-images/mine/8pc5) | H3K36me3 nucleosome-LEDGF/p75 PWWP domain complex | Descriptor: | Histone H2A, Histone H2B 1.1, Histone H3, ... | Authors: | Koutna, E, Kouba, T, Veverka, V. | Deposit date: | 2023-06-09 | Release date: | 2023-08-16 | Last modified: | 2023-11-15 | Method: | ELECTRON MICROSCOPY (3.02 Å) | Cite: | Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
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7QE5
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![BU of 7qe5 by Molmil](/molmil-images/mine/7qe5) | |
7QD8
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![BU of 7qd8 by Molmil](/molmil-images/mine/7qd8) | Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in apo state | Descriptor: | Transposase for transposon Tn4430 | Authors: | Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G. | Deposit date: | 2021-11-26 | Release date: | 2022-10-26 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | Structural insight into Tn3 family transposition mechanism. Nat Commun, 13, 2022
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1GG2
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![BU of 1gg2 by Molmil](/molmil-images/mine/1gg2) | |
3QQO
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8PEO
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![BU of 8peo by Molmil](/molmil-images/mine/8peo) | H3K36me2 nucleosome-LEDGF/p75 PWWP domain complex | Descriptor: | (2R)-2-amino-3-(2-dimethylaminoethylsulfanyl)propanoic acid, Histone H2A, Histone H2B 1.1, ... | Authors: | Koutna, E, Kouba, T, Veverka, V. | Deposit date: | 2023-06-14 | Release date: | 2023-08-16 | Last modified: | 2023-11-15 | Method: | ELECTRON MICROSCOPY (2.69 Å) | Cite: | Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
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7QD4
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![BU of 7qd4 by Molmil](/molmil-images/mine/7qd4) | Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with 100 bp long transposon end DNA | Descriptor: | IR100 DNA substrate, none transferred strand, transferred strand, ... | Authors: | Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G. | Deposit date: | 2021-11-26 | Release date: | 2022-10-26 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | Structural insight into Tn3 family transposition mechanism. Nat Commun, 13, 2022
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7QDO
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![BU of 7qdo by Molmil](/molmil-images/mine/7qdo) | Cryo-EM structure of human monomeric IgM-Fc | Descriptor: | Isoform 2 of Immunoglobulin heavy constant mu | Authors: | Chen, Q, Rosenthal, P, Tolar, P. | Deposit date: | 2021-11-27 | Release date: | 2022-10-26 | Last modified: | 2022-11-09 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | Cryomicroscopy reveals the structural basis for a flexible hinge motion in the immunoglobulin M pentamer. Nat Commun, 13, 2022
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6ZDT
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![BU of 6zdt by Molmil](/molmil-images/mine/6zdt) | Crystal structure of eukaryotic Fibrillarin with Nop56 N-terminal domain | Descriptor: | Nucleolar protein 56, rRNA 2'-O-methyltransferase fibrillarin | Authors: | Hoefler, S, Lukat, P, Carlomagno, T, Blankenfeldt, W. | Deposit date: | 2020-06-15 | Release date: | 2021-02-03 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (1.71 Å) | Cite: | High-resolution structure of eukaryotic Fibrillarin interacting with Nop56 amino-terminal domain. Rna, 27, 2021
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