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5K68
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Designed Artificial Cupredoxins
Descriptor: Streptavidin, [CuII(biot-bu-dpea)]2+
Authors:Mann, S.I, Heinisch, T, Weitz, A.C, Hendrich, M.R, Ward, T.R, Borovik, A.S.
Deposit date:2016-05-24
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Modular Artificial Cupredoxins.
J.Am.Chem.Soc., 138, 2016
5L3Y
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Designed Artificial Cupredoxins
Descriptor: Streptavidin, [CuII(biot-et-dpea)]2+
Authors:Mann, S.I, Heinisch, T, Weitz, A.C, Hendrich, M.R, Ward, T.R, Borovik, A.S.
Deposit date:2016-05-24
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Modular Artificial Cupredoxins.
J.Am.Chem.Soc., 138, 2016
5B5G
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Crystal structure of ALiS4-Streptavidin complex
Descriptor: SULFITE ION, Streptavidin, methyl 5-(4-oxidanylidene-5~{H}-furo[3,2-c]pyridin-2-yl)pyridine-3-carboxylate
Authors:Sugiyama, S, Terai, T, Kakinouchi, K, Fujikake, R, Nagano, T, Urano, Y.
Deposit date:2016-05-04
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Improving the Solubility of Artificial Ligands of Streptavidin to Enable More Practical Reversible Switching of Protein Localization in Cells
Chembiochem, 18, 2017
5B5F
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Crystal structure of ALiS3-Streptavidin complex
Descriptor: N-methyl-3-(4-oxo-4,5-dihydrofuro[3,2-c]pyridin-2-yl)benzenesulfonamide, Streptavidin
Authors:Sugiyama, S, Terai, T, Kakinouchi, K, Fujikake, R, Nagano, T, Urano, Y.
Deposit date:2016-05-04
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Improving the Solubility of Artificial Ligands of Streptavidin to Enable More Practical Reversible Switching of Protein Localization in Cells
Chembiochem, 18, 2017
5JD2
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SFX structure of corestreptavidin-selenobiotin complex
Descriptor: 5-[(3aS,4S,6aR)-2-oxohexahydro-1H-selenopheno[3,4-d]imidazol-4-yl]pentanoic acid, Streptavidin
Authors:DeMirci, H, Hunter, M.S, Boutet, S.
Deposit date:2016-04-15
Release date:2016-11-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Selenium single-wavelength anomalous diffraction de novo phasing using an X-ray-free electron laser.
Nat Commun, 7, 2016
5IRU
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Crystal structure of avidin in complex with 1-biotinylpyrene
Descriptor: 1-biotinylpyrene, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
Authors:Strzelczyk, P, Bujacz, G.
Deposit date:2016-03-14
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of the Avidin Interactions with Fluorescent Pyrene-Conjugates: 1-Biotinylpyrene and 1-Desthiobiotinylpyrene.
Molecules, 21, 2016
5IRW
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Crystal structure of avidin in complex with 1-desthiobiotinylpyrene
Descriptor: 1-desthiobiotinylpyrene, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
Authors:Strzelczyk, P, Bujacz, G.
Deposit date:2016-03-14
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Characterization of the Avidin Interactions with Fluorescent Pyrene-Conjugates: 1-Biotinylpyrene and 1-Desthiobiotinylpyrene.
Molecules, 21, 2016
5HLM
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Crystal structure of avidin complex with a ferrocene biotin derivative
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, [(1,2,3,4,5-eta)-cyclopentadienyl]{(1,2,3,4,5-eta)-1-[1-hydroxy-5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentyl]cyclopentadienyl}iron
Authors:Strzelczyk, P, Bujacz, G.
Deposit date:2016-01-15
Release date:2017-01-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ferrocene-Biotin Conjugates: Synthesis, Structure, Cytotoxic Activity and Interaction with Avidin
Chempluschem, 81, 2016
5F2B
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Expanding Nature's Catalytic Repertoire -Directed Evolution of an Artificial Metalloenzyme for In Vivo Metathesis
Descriptor: SULFATE ION, Streptavidin, [1-[4-[[5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]methyl]-2,6-dimethyl-phenyl]-3-(2,4,6-trimethylphenyl)-4,5-dihydroimidazol-1-ium-2-yl]-bis(chloranyl)ruthenium
Authors:Heinisch, T, Jeschek, M, Reuter, R, Trindler, C, Panke, S, Ward, T.R.
Deposit date:2015-12-01
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Directed evolution of artificial metalloenzymes for in vivo metathesis.
Nature, 537, 2016
5CSE
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Streptavidin-S112Y-K121E Complexed with Palladium-Containing Biotin Ligand
Descriptor: CHLORIDE ION, Streptavidin, chloro{di-tert-butyl[2-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)ethyl]-lambda~5~-phosphanyl}(1-phenylprop-1-ene-1,3-diyl-kappa~2~C~1~,C~3~)palladium
Authors:Finke, A.D, Vera, L, Marsh, M, Chatterjee, A, Ward, T.R.
Deposit date:2015-07-23
Release date:2015-11-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:An enantioselective artificial Suzukiase based on the biotin-streptavidin technology.
Chem Sci, 7, 2016
5CHK
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Crystal structure of avidin - HABA complex (hexagonal crystal form)
Descriptor: 2-[2-(4-oxocyclohexa-2,5-dien-1-ylidene)hydrazinyl]benzoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
Authors:Strzelczyk, P, Bujacz, A, Bujacz, G.
Deposit date:2015-07-10
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and ligand affinity of avidin in the complex with 4-hydroxyazobenzene-2-carboxylic acid
J.Mol.Struct., 1109, 2016
4Z6J
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BU of 4z6j by Molmil
Crystal structure of apo intact hoefavidin
Descriptor: Avidin family
Authors:Livnah, O, Avraham, O.
Deposit date:2015-04-05
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Hoefavidin: A dimeric bacterial avidin with a C-terminal binding tail.
J.Struct.Biol., 191, 2015
4Z2O
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BU of 4z2o by Molmil
High resolution crystal structure of short hoefavidin-hoef-peptide complex
Descriptor: Avidin family, Hoef-peptide
Authors:Livnah, O, Avraham, O.
Deposit date:2015-03-30
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Hoefavidin: A dimeric bacterial avidin with a C-terminal binding tail.
J.Struct.Biol., 191, 2015
4Z2P
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Crystal structure of short hoefavidin-hoef-peptide(L9F) complex
Descriptor: Avidin family, Hoef-peptide (L9F)
Authors:Livnah, O, Avraham, O.
Deposit date:2015-03-30
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Hoefavidin: A dimeric bacterial avidin with a C-terminal binding tail.
J.Struct.Biol., 191, 2015
4Z2V
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BU of 4z2v by Molmil
Crystal structure of short hoefavidin-hoef-peptide complex
Descriptor: Avidin family, Hoef-peptide
Authors:Livnah, O, Avraham, O.
Deposit date:2015-03-30
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Hoefavidin: A dimeric bacterial avidin with a C-terminal binding tail.
J.Struct.Biol., 191, 2015
4Z28
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Crystal structure of short hoefavidin biotin complex
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Avidin family, BIOTIN
Authors:Livnah, O, Avraham, O.
Deposit date:2015-03-29
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Hoefavidin: A dimeric bacterial avidin with a C-terminal binding tail.
J.Struct.Biol., 191, 2015
4Z27
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Crystal structure of apo short hoefavidin
Descriptor: Avidin family
Authors:Livnah, O, Avraham, O.
Deposit date:2015-03-29
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Hoefavidin: A dimeric bacterial avidin with a C-terminal binding tail.
J.Struct.Biol., 191, 2015
4YVB
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BU of 4yvb by Molmil
Structure of D128N streptavidin
Descriptor: BIOTIN, Streptavidin
Authors:Baugh, L, Le Trong, I, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
Deposit date:2015-03-19
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.351 Å)
Cite:A Streptavidin Binding Site Mutation Yields an Unexpected Result
To Be Published
4Y59
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Crystal structure of ALiS1-Streptavidin complex
Descriptor: 2-[3-(trifluoromethyl)phenyl]furo[3,2-c]pyridin-4(5H)-one, Streptavidin
Authors:Sugiyama, S, Terai, T, Kohno, M, Ishida, H, Nagano, T.
Deposit date:2015-02-11
Release date:2015-09-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Artificial Ligands of Streptavidin (ALiS): Discovery, Characterization, and Application for Reversible Control of Intracellular Protein Transport
J.Am.Chem.Soc., 137, 2015
4Y5D
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CRYSTAL STRUCTURE OF ALiS2-STREPTAVIDIN COMPLEX
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, DIMETHYL SULFOXIDE, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Terai, T, Kohno, M, Ishida, H, Nagano, T.
Deposit date:2015-02-11
Release date:2015-09-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Artificial Ligands of Streptavidin (ALiS): Discovery, Characterization, and Application for Reversible Control of Intracellular Protein Transport
J.Am.Chem.Soc., 137, 2015
3X00
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Crystal structure of the core streptavidin mutant V212 (Y22S/N23D/S27D/S45N/Y83S/R84K/E101D/R103K/E116N) complexed with bis iminobiotin long tail (Bis-IMNtail) at 1.3 A resolution
Descriptor: 6-({5-[(2E,3aS,4S,6aR)-2-iminohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)hexanoic acid, ETHANE-1,2-DIAMINE, Streptavidin
Authors:Kawato, T, Mizohata, E, Shimizu, Y, Meshizuka, T, Yamamoto, T, Takasu, N, Matsuoka, M, Matsumura, H, Kodama, T, Kanai, M, Doi, H, Inoue, T, Sugiyama, A.
Deposit date:2014-10-09
Release date:2015-01-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure-based design and synthesis of a bivalent iminobiotin analog showing strong affinity toward a low immunogenic streptavidin mutant.
Biosci.Biotechnol.Biochem., 79, 2015
3WZN
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Crystal structure of the core streptavidin mutant V21 (Y22S/N23D/S27D/Y83S/R84K/E101D/R103K/E116N) complexed with biotin at 1.3 A resolution
Descriptor: BIOTIN, SULFATE ION, Streptavidin
Authors:Kawato, T, Mizohata, E, Shimizu, Y, Meshizuka, T, Yamamoto, T, Takasu, N, Matsuoka, M, Matsumura, H, Tsumoto, K, Kodama, T, Kanai, M, Doi, H, Inoue, T, Sugiyama, A.
Deposit date:2014-10-01
Release date:2015-02-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure-based design of a streptavidin mutant specific for an artificial biotin analogue.
J.Biochem., 157, 2015
3WZP
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Crystal structure of the core streptavidin mutant V21 (Y22S/N23D/S27D/Y83S/R84K/E101D/R103K/E116N) complexed with iminobiotin long tail (IMNtail) at 1.2 A resolution
Descriptor: 6-({5-[(2E,3aS,4S,6aR)-2-iminohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)hexanoic acid, GLYCEROL, Streptavidin
Authors:Kawato, T, Mizohata, E, Shimizu, Y, Meshizuka, T, Yamamoto, T, Takasu, N, Matsuoka, M, Matsumura, H, Tsumoto, K, Kodama, T, Kanai, M, Doi, H, Inoue, T, Sugiyama, A.
Deposit date:2014-10-01
Release date:2015-02-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure-based design of a streptavidin mutant specific for an artificial biotin analogue.
J.Biochem., 157, 2015
3WZQ
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BU of 3wzq by Molmil
Crystal structure of the core streptavidin mutant V212 (Y22S/N23D/S27D/S45N/Y83S/R84K/E101D/R103K/E116N) complexed with iminobiotin long tail (IMNtail) at 1.7 A resolution
Descriptor: 6-({5-[(2E,3aS,4S,6aR)-2-iminohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)hexanoic acid, HEXAETHYLENE GLYCOL, Streptavidin
Authors:Kawato, T, Mizohata, E, Shimizu, Y, Meshizuka, T, Yamamoto, T, Takasu, N, Matsuoka, M, Matsumura, H, Tsumoto, K, Kodama, T, Kanai, M, Doi, H, Inoue, T, Sugiyama, A.
Deposit date:2014-10-01
Release date:2015-02-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based design of a streptavidin mutant specific for an artificial biotin analogue.
J.Biochem., 157, 2015
3WZO
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BU of 3wzo by Molmil
Crystal structure of the core streptavidin mutant V21 (Y22S/N23D/S27D/Y83S/R84K/E101D/R103K/E116N) complexed with biotin long tail (BTNtail) at 1.5 A resolution
Descriptor: 6-({5-[(3aS,4S,5S,6aR)-5-oxido-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)hexanoic acid, CADMIUM ION, GLYCEROL, ...
Authors:Kawato, T, Mizohata, E, Shimizu, Y, Meshizuka, T, Yamamoto, T, Takasu, N, Matsuoka, M, Matsumura, H, Tsumoto, K, Kodama, T, Kanai, M, Doi, H, Inoue, T, Sugiyama, A.
Deposit date:2014-10-01
Release date:2015-02-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-based design of a streptavidin mutant specific for an artificial biotin analogue.
J.Biochem., 157, 2015

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