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8FFZ
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BU of 8ffz by Molmil
TFIIIA-TFIIIC-Brf1-TBP complex bound to 5S rRNA gene
Descriptor: DNA (151-MER), Transcription factor IIIA, Transcription factor IIIB 70 kDa subunit,TATA-box-binding protein, ...
Authors:Talyzina, A, He, Y.
Deposit date:2022-12-11
Release date:2023-06-21
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of TFIIIC-dependent RNA polymerase III transcription initiation.
Mol.Cell, 83, 2023
8GXS
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BU of 8gxs by Molmil
PIC-Mediator in complex with +1 nucleosome (T40N) in H-binding state
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Chen, X, Wang, X, Liu, W, Ren, Y, Qu, X, Li, J, Yin, X.
Deposit date:2022-09-21
Release date:2022-11-02
Method:ELECTRON MICROSCOPY (4.16 Å)
Cite:Structures of +1 nucleosome-bound PIC-Mediator complex.
Science, 378, 2022
8GXQ
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BU of 8gxq by Molmil
PIC-Mediator in complex with +1 nucleosome (T40N) in MH-binding state
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Chen, X, Wang, X, Liu, W, Ren, Y, Qu, X, Li, J, Yin, X, Xu, Y.
Deposit date:2022-09-21
Release date:2022-11-02
Method:ELECTRON MICROSCOPY (5.04 Å)
Cite:Structures of +1 nucleosome-bound PIC-Mediator complex.
Science, 378, 2022
6CNB
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BU of 6cnb by Molmil
Yeast RNA polymerase III initial transcribing complex
Descriptor: DNA (71-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Han, Y, He, Y.
Deposit date:2018-03-08
Release date:2018-08-22
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural visualization of RNA polymerase III transcription machineries.
Cell Discov, 4, 2018
6CNC
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BU of 6cnc by Molmil
Yeast RNA polymerase III open complex
Descriptor: DNA (71-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Han, Y, He, Y.
Deposit date:2018-03-08
Release date:2018-08-22
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural visualization of RNA polymerase III transcription machineries.
Cell Discov, 4, 2018
6CNF
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BU of 6cnf by Molmil
Yeast RNA polymerase III elongation complex
Descriptor: DNA (79-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Han, Y, He, Y.
Deposit date:2018-03-08
Release date:2018-08-22
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural visualization of RNA polymerase III transcription machineries.
Cell Discov, 4, 2018
6CND
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BU of 6cnd by Molmil
Yeast RNA polymerase III natural open complex (nOC)
Descriptor: DNA (71-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Han, Y, He, Y.
Deposit date:2018-03-08
Release date:2018-08-22
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structural visualization of RNA polymerase III transcription machineries.
Cell Discov, 4, 2018
7Z0O
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BU of 7z0o by Molmil
Structure of transcription factor UAF in complex with TBP and 35S rRNA promoter DNA
Descriptor: Histone H3, Histone H4, Non-template DNA, ...
Authors:Baudin, F, Murciano, B, Fung, H.K.H, Fromm, S.A, Mueller, C.W.
Deposit date:2022-02-23
Release date:2022-04-27
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Mechanism of RNA polymerase I selection by transcription factor UAF.
Sci Adv, 8, 2022
7Z8S
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BU of 7z8s by Molmil
Mot1:TBP:DNA - post hydrolysis state
Descriptor: DNA (36-MER), Helicase-like protein, Putative tata-box binding protein
Authors:Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
Deposit date:2022-03-18
Release date:2023-03-29
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
7Z7N
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BU of 7z7n by Molmil
Mot1E1434Q:TBP:DNA - substrate recognition state
Descriptor: DNA (36-MER), Helicase-like protein, Putative tata-box binding protein
Authors:Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
7ZB5
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BU of 7zb5 by Molmil
Mot1(1-1836):TBP:DNA - post-hydrolysis complex dimer
Descriptor: DNA (36-MER), Helicase-like protein, Putative tata-box binding protein
Authors:Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
Deposit date:2022-03-23
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
6TBM
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BU of 6tbm by Molmil
Structure of SAGA bound to TBP, including Spt8 and DUB
Descriptor: Polyubiquitin-B, SAGA-associated factor 11, Spt20, ...
Authors:Papai, G, Frechard, A, Kolesnikova, O, Crucifix, C, Schultz, P, Ben-Shem, A.
Deposit date:2019-11-01
Release date:2020-02-12
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (20 Å)
Cite:Structure of SAGA and mechanism of TBP deposition on gene promoters.
Nature, 577, 2020
7LBM
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BU of 7lbm by Molmil
Structure of the human Mediator-bound transcription pre-initiation complex
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Abdella, R, Talyzina, A, He, Y.
Deposit date:2021-01-08
Release date:2021-03-24
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure of the human Mediator-bound transcription preinitiation complex.
Science, 372, 2021
6F42
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BU of 6f42 by Molmil
RNA Polymerase III closed complex CC1.
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W.
Deposit date:2017-11-29
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Molecular mechanism of promoter opening by RNA polymerase III.
Nature, 553, 2018
6F41
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BU of 6f41 by Molmil
RNA Polymerase III initially transcribing complex
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W.
Deposit date:2017-11-29
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Molecular mechanism of promoter opening by RNA polymerase III.
Nature, 553, 2018
6F40
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BU of 6f40 by Molmil
RNA Polymerase III open complex
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W.
Deposit date:2017-11-29
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Molecular mechanism of promoter opening by RNA polymerase III.
Nature, 553, 2018
6EU0
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BU of 6eu0 by Molmil
RNA Polymerase III open pre-initiation complex (OC-PIC)
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Abascal-Palacios, G, Ramsay, E.P, Beuron, F, Morris, E, Vannini, A.
Deposit date:2017-10-27
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis of RNA polymerase III transcription initiation.
Nature, 553, 2018
6F44
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BU of 6f44 by Molmil
RNA Polymerase III closed complex CC2.
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W.
Deposit date:2017-11-29
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Molecular mechanism of promoter opening by RNA polymerase III.
Nature, 553, 2018
7ZS9
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BU of 7zs9 by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome (complex A)
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Wang, H, Cramer, P.
Deposit date:2022-05-06
Release date:2022-11-16
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
7NVR
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BU of 7nvr by Molmil
Human Mediator with RNA Polymerase II Pre-initiation complex
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Rengachari, S, Schilbach, S, Aibara, S, Cramer, P.
Deposit date:2021-03-15
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7ZKE
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BU of 7zke by Molmil
Mot1:TBP:DNA - pre-hydrolysis state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (36-MER), ...
Authors:Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
Deposit date:2022-04-12
Release date:2023-04-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
8BVW
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BU of 8bvw by Molmil
RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W)
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P.
Deposit date:2022-12-20
Release date:2023-05-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Mol.Cell, 83, 2023
8CEO
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BU of 8ceo by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator and the +1 nucleosome
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Wang, H, Cramer, P.
Deposit date:2023-02-02
Release date:2023-03-08
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Yeast PIC-Mediator structure with RNA polymerase II C-terminal domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8BZ1
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BU of 8bz1 by Molmil
RNA polymerase II core pre-initiation complex with the proximal +1 nucleosome (cPIC-Nuc10W)
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB11-a, ...
Authors:Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P.
Deposit date:2022-12-14
Release date:2023-05-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Mol.Cell, 83, 2023
8BYQ
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BU of 8byq by Molmil
RNA polymerase II pre-initiation complex with the proximal +1 nucleosome (PIC-Nuc10W)
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P.
Deposit date:2022-12-14
Release date:2023-05-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Mol.Cell, 83, 2023

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PDB entries from 2024-10-16

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