Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4MIX
DownloadVisualize
BU of 4mix by Molmil
PaToxG Glycosyltransferase
Descriptor: CALCIUM ION, Putative insecticidal toxin, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
Authors:Bogdanovic, X, Wirth, C, Hunte, C.
Deposit date:2013-09-02
Release date:2013-10-16
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A bacterial toxin catalyzing tyrosine glycosylation of Rho and deamidation of Gq and Gi proteins.
Nat.Struct.Mol.Biol., 20, 2013
4OQ5
DownloadVisualize
BU of 4oq5 by Molmil
Crystal Structure of Human MCL-1 Bound to Inhibitor 4-(4-methylnaphthalen-1-yl)-2-{[(4-phenoxyphenyl)sulfonyl]amino}benzoic acid
Descriptor: 4-(4-methylnaphthalen-1-yl)-2-{[(4-phenoxyphenyl)sulfonyl]amino}benzoic acid, Induced myeloid leukemia cell differentiation protein Mcl-1
Authors:Petros, A.M, Swann, S.L, Song, D, Swinger, K, Park, C, Zhang, H, Wendt, M.D, Kunzer, A.R, Souers, A.J, Sun, C.
Deposit date:2014-02-07
Release date:2014-03-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Fragment-based discovery of potent inhibitors of the anti-apoptotic MCL-1 protein.
Bioorg.Med.Chem.Lett., 24, 2014
4NAL
DownloadVisualize
BU of 4nal by Molmil
Arabidopsis thaliana IspD in complex with tribromodichloro-pseudilin
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2,4-DICHLORO-6-(3,4,5-TRIBROMO-1H-PYRROL-2-YL)PHENOL, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, ...
Authors:Kunfermann, A, Witschel, M, Illarionov, B, Martin, R, Rottmann, M, Hoffken, H.W, Seet, M, Eisenreich, W, Knolker, H.-J, Fischer, M, Bacher, A, Groll, M, Diederich, F.
Deposit date:2013-10-22
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Pseudilins: Halogenated, Allosteric Inhibitors of the Non-Mevalonate Pathway Enzyme IspD.
Angew.Chem.Int.Ed.Engl., 53, 2014
4LQR
DownloadVisualize
BU of 4lqr by Molmil
Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens
Descriptor: CALCIUM ION, Glycosyl hydrolase, family 31/fibronectin type III domain protein
Authors:Grondin, J.M, Furness, H.S, Duan, D, Spencer, C.A, Allingham, J.S, Smith, S.P.
Deposit date:2013-07-19
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
Plos One, 12, 2017
4P5Y
DownloadVisualize
BU of 4p5y by Molmil
Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with N-acetylgalactosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, Glycosyl hydrolase, ...
Authors:Grondin, J.M, Allingham, J.S, Boraston, A.B, Smith, S.P.
Deposit date:2014-03-04
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
PLoS ONE, 12, 2017
8G24
DownloadVisualize
BU of 8g24 by Molmil
Crystal Structure of Cathepsin-G and Neutrophil Elastase Inhibited by S. aureus EapH2 at pH 5.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin-G, MAP domain-containing protein, ...
Authors:Mishra, N.B, Geisbrecht, B.V.
Deposit date:2023-02-03
Release date:2023-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Simultaneous inhibition of two neutrophil serine proteases by the S. aureus innate immune evasion protein EapH2.
J.Biol.Chem., 299, 2023
8G25
DownloadVisualize
BU of 8g25 by Molmil
Crystal Structure of Cathepsin-G and Neutrophil Elastase Inhibited by S. aureus EapH2 at pH 7.5
Descriptor: Cathepsin-G, MAP domain-containing protein, Neutrophil elastase
Authors:Mishra, N.B, Geisbrecht, B.V.
Deposit date:2023-02-03
Release date:2023-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Simultaneous inhibition of two neutrophil serine proteases by the S. aureus innate immune evasion protein EapH2.
J.Biol.Chem., 299, 2023
8G26
DownloadVisualize
BU of 8g26 by Molmil
Crystal Structure of Cathepsin-G and Neutrophil Elastase Inhibited by S. aureus EapH2 at pH 8.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin-G, ...
Authors:Mishra, N.B, Geisbrecht, B.V.
Deposit date:2023-02-03
Release date:2023-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Simultaneous inhibition of two neutrophil serine proteases by the S. aureus innate immune evasion protein EapH2.
J.Biol.Chem., 299, 2023
8FG6
DownloadVisualize
BU of 8fg6 by Molmil
Design of amyloidogenic peptide traps
Descriptor: C104.1, amyloidogenic peptide
Authors:Sahtoe, D.D, Bera, A.K, Baker, D.
Deposit date:2022-12-12
Release date:2024-03-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design of amyloidogenic peptide traps.
Nat.Chem.Biol., 2024
8FTQ
DownloadVisualize
BU of 8ftq by Molmil
Crystal structure of hRpn13 Pru domain in complex with Ubiquitin and XL44
Descriptor: N-(3-{[(3R)-5-fluoro-2-oxo-2,3-dihydro-1H-indol-3-yl]methyl}phenyl)-4-methoxybenzamide, Proteasomal ubiquitin receptor ADRM1, Ubiquitin
Authors:Walters, K.J, Lu, X, Chandravanshi, M.
Deposit date:2023-01-13
Release date:2024-03-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A structure-based designed small molecule depletes hRpn13 Pru and a select group of KEN box proteins.
Nat Commun, 15, 2024
8GVN
DownloadVisualize
BU of 8gvn by Molmil
Novel salt-resistant antimicrobial peptide, RR14
Descriptor: TRP-LEU-ARG-ARG-ILE-LYS-ALA-TRP-LEU-ARG-ARG-ILE-LYS-ALA
Authors:Lin, T.L, Tseng, T.S, Fan, P.J.
Deposit date:2022-09-15
Release date:2022-11-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Deciphering Structure-Function Relationship Unveils Salt-Resistant Mode of Action of a Potent MRSA-Inhibiting Antimicrobial Peptide, RR14.
J.Bacteriol., 204, 2022
8GP7
DownloadVisualize
BU of 8gp7 by Molmil
Structure of Trioxacarcin A covalently bound to RET G4-DNA
Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3'), Trioxacarcin A, bound form
Authors:Yin, S, Cao, C.
Deposit date:2022-08-25
Release date:2023-09-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Trioxacarcin A Interactions with G-Quadruplex DNA Reveal Its Potential New Targets as an Anticancer Agent.
J.Med.Chem., 66, 2023
6HQC
DownloadVisualize
BU of 6hqc by Molmil
Structural investigation of the TasA anchoring protein TapA from Bacillus subtilis
Descriptor: 1,2-ETHANEDIOL, TasA anchoring/assembly protein
Authors:Roske, Y, Heinemann, U.
Deposit date:2018-09-24
Release date:2019-10-09
Last modified:2023-04-26
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:TapA acts as specific chaperone in TasA filament formation by strand complementation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G9A
DownloadVisualize
BU of 8g9a by Molmil
Crystal structure of a resurrected ancestor (AncRNase) of the pancreatic-type RNases 2 and 3 sub-families
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, SULFATE ION, ...
Authors:Tran, T.T.Q, Pham, N.T.H, Calmettes, C, Doucet, N.
Deposit date:2023-02-21
Release date:2024-02-28
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Ancestral sequence reconstruction dissects structural and functional differences among eosinophil ribonucleases.
J.Biol.Chem., 300, 2024
8HDJ
DownloadVisualize
BU of 8hdj by Molmil
Periplasmic domain of RsgI2 of Clostridium thermocellum
Descriptor: Anti-sigma-I factor RsgI2, Periplasmic domain of RsgI2
Authors:Chen, C, Dong, S, Feng, Y.G.
Deposit date:2022-11-04
Release date:2023-05-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Essential autoproteolysis of bacterial anti-sigma factor RsgI for transmembrane signal transduction.
Sci Adv, 9, 2023
8HN3
DownloadVisualize
BU of 8hn3 by Molmil
Soluble domain of cytochrome c-556 from Chlorobaculum tepidum
Descriptor: ACETATE ION, Cytochrome c-556, GLYCEROL, ...
Authors:Kishimoto, H, Azai, C, Yamamoto, T, Mutoh, R, Nakaniwa, T, Tanaka, H, Kurisu, G, Oh-oka, H.
Deposit date:2022-12-07
Release date:2023-07-05
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Soluble domains of cytochrome c-556 and Rieske iron-sulfur protein from Chlorobaculum tepidum: Crystal structures and interaction analysis.
Curr Res Struct Biol, 5, 2023
8HN2
DownloadVisualize
BU of 8hn2 by Molmil
Selenomethionine-labelled soluble domain of Rieske iron-sulfur protein from chlorobaculum tepidum
Descriptor: Cytochrome b6-f complex iron-sulfur subunit, FE2/S2 (INORGANIC) CLUSTER
Authors:Kishimoto, H, Mutoh, R, Tanaka, H, Kurisu, G, Oh-oka, H.
Deposit date:2022-12-07
Release date:2023-07-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Soluble domains of cytochrome c-556 and Rieske iron-sulfur protein from Chlorobaculum tepidum: Crystal structures and interaction analysis.
Curr Res Struct Biol, 5, 2023
8HUJ
DownloadVisualize
BU of 8huj by Molmil
Cryo-EM structure of the J-K-St region of EMCV IRES in complex with eIF4G-HEAT1 and eIF4A
Descriptor: Eukaryotic initiation factor 4A-I, Eukaryotic translation initiation factor 4 gamma 1, IRES RNA (J-K-St), ...
Authors:Suzuki, H, Fujiyoshi, Y, Imai, S, Shimada, I.
Deposit date:2022-12-24
Release date:2023-08-02
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Dynamically regulated two-site interaction of viral RNA to capture host translation initiation factor.
Nat Commun, 14, 2023
8GGG
DownloadVisualize
BU of 8ggg by Molmil
RNase A-Adenosine 5'-Hexaphosphate (RNaseA.p6A)
Descriptor: GLYCEROL, Ribonuclease pancreatic, adenosine 5'-hexaphosphate
Authors:Park, G, Cummins, C.
Deposit date:2023-03-08
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Experimental and Computational Studies for the Effect of Lengthening the Phosphate Chain of Nucleotide on the RNase A Inhibitiors.
To Be Published
8GE0
DownloadVisualize
BU of 8ge0 by Molmil
Crystal structure of JADE1 PZP domain in complex with Histone H3
Descriptor: Histone H3.1,Protein Jade-1, ZINC ION
Authors:Klein, B.J, Liu, J, Kutateladze, T.G.
Deposit date:2023-03-06
Release date:2024-03-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Guiding the HBO1 complex function through the JADE subunit.
Nat.Struct.Mol.Biol., 2024
8HR4
DownloadVisualize
BU of 8hr4 by Molmil
[D-Cys5,D-Lys16]-STp(5-17)
Descriptor: DCY-CYS-GLU-LEU-CYS-CYS-ASN-PRO-ALA-CYS-ALA-DLY-CYS
Authors:Shimamoto, S, Hidaka, Y, Yoshino, S, Goto, M.
Deposit date:2022-12-14
Release date:2023-12-20
Method:SOLUTION NMR
Cite:The molecular basis of heat-stable enterotoxin for vaccine development and cancer cell detection
To Be Published
1HC9
DownloadVisualize
BU of 1hc9 by Molmil
alpha-bungarotoxin complexed with high affinity peptide
Descriptor: ALPHA-BUNGAROTOXIN ISOFORM A31, ALPHA-BUNGAROTOXIN ISOFORM V31, IODIDE ION, ...
Authors:Harel, M, Kasher, R, Sussman, J.L.
Deposit date:2001-05-02
Release date:2001-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Binding Site of Acetylcholine Receptor as Visualized in the X-Ray Structure of a Complex between Alpha-Bungarotoxin and a Mimotope Peptide.
Neuron, 32, 2001
2W49
DownloadVisualize
BU of 2w49 by Molmil
ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE
Descriptor: ACTIN, ALPHA SKELETAL MUSCLE, CALCIUM ION, ...
Authors:Wu, S, Liu, J, Reedy, M.C, Tregear, R.T, Winkler, H, Franzini-Armstrong, C, Sasaki, H, Lucaveche, C, Goldman, Y.E, Reedy, M.K, Taylor, K.A.
Deposit date:2008-11-24
Release date:2010-05-05
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Electron Tomography of Cryofixed, Isometrically Contracting Insect Flight Muscle Reveals Novel Actin-Myosin Interactions
Plos One, 5, 2010
2V3R
DownloadVisualize
BU of 2v3r by Molmil
Hypocrea jecorina Cel7A in complex with (S)-dihydroxy-phenanthrenolol
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-{[(2S)-2-HYDROXY-3-(9-PHENANTHRYLOXY)PROPYL]AMINO}PROPANE-1,3-DIOL, COBALT (II) ION, ...
Authors:Fagerstrom, A, Sandgren, M, Berg, U, Stahlberg, J.
Deposit date:2007-06-21
Release date:2008-07-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Study of the Chiral Recognition Mechanisms of Cellobiohydrolase Cel7A for Ligands Based on the Beta-Blocker Motif: Crystal Structures, Microcalorimetry and Computational Modelling of Cel7A-Inhibitor Complexes.
To be Published
2WWK
DownloadVisualize
BU of 2wwk by Molmil
Crystal structure of the Titin M10-Obscurin like 1 Ig F17R mutant complex
Descriptor: GLYCEROL, OBSCURIN-LIKE PROTEIN 1, SULFATE ION, ...
Authors:Pernigo, S, Fukuzawa, A, Gautel, M, Steiner, R.A.
Deposit date:2009-10-25
Release date:2010-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Insight Into M-Band Assembly and Mechanics from the Titin-Obscurin-Like-1 Complex.
Proc.Natl.Acad.Sci.USA, 107, 2010

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon