PDB: 72372 resultsInfo pagesStatus searchChemie searchBIRD

---

8RE4	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 5nt pre-translocated complex Descriptor: DNA (47-MER), DNA (50-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Gao, F, Zhang, X. Deposit date: 2023-12-10 Release date: 2024-01-17 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024
8REE	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 9nt complex Descriptor: DNA (45-MER), DNA (49-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Gao, F, Zhang, X. Deposit date: 2023-12-10 Release date: 2024-01-17 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024
8REC	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 7nt complex Descriptor: DNA (46-MER), DNA (51-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Gao, F, Zhang, X. Deposit date: 2023-12-10 Release date: 2024-01-17 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024
8REB	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 6nt complex Descriptor: DNA (43-MER), DNA (52-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Gao, F, Zhang, X. Deposit date: 2023-12-10 Release date: 2024-01-17 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024
8REA	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 5nt post-translocated complex Descriptor: DNA (44-MER), DNA (51-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Gao, F, Zhang, X. Deposit date: 2023-12-10 Release date: 2024-01-17 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024
7XT3	Crystal Structure of Hepatitis virus A 2C protein 128-335 aa Descriptor: Genome polyprotein, PHOSPHATE ION Authors: Chen, P, Wojdyla, J.A, Li, Z, Wang, M, Cui, S. Deposit date: 2022-05-16 Release date: 2022-07-27 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Biochemical and structural characterization of hepatitis A virus 2C reveals an unusual ribonuclease activity on single-stranded RNA. Nucleic Acids Res., 50, 2022
1B27	STRUCTURAL RESPONSE TO MUTATION AT A PROTEIN-PROTEIN INTERFACE Descriptor: PROTEIN (BARNASE), PROTEIN (BARSTAR) Authors: Vaughan, C.K, Buckle, A.M, Fersht, A.R. Deposit date: 1998-12-04 Release date: 1998-12-09 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural response to mutation at a protein-protein interface. J.Mol.Biol., 286, 1999
6SQQ	Structure of the U1A variant A1-98 Y31H/Q36R/F56W triple mutant in complex with RNA obtained by soaking Descriptor: MAGNESIUM ION, RNA hairpin, U1 small nuclear ribonucleoprotein A Authors: Rosenbach, H, Span, I. Deposit date: 2019-09-04 Release date: 2020-05-13 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.37 Å) Cite: Expanding crystallization tools for nucleic acid complexes using U1A protein variants. J.Struct.Biol., 210, 2020
4B4N	CPSF6 defines a conserved capsid interface that modulates HIV-1 replication Descriptor: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6, GAG PROTEIN Authors: Price, A.J, James, L.C. Deposit date: 2012-07-31 Release date: 2012-09-19 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.813 Å) Cite: Cpsf6 Defines a Conserved Capsid Interface that Modulates HIV-1 Replication. Plos Pathog., 8, 2012
1B2U	STRUCTURAL RESPONSE TO MUTATION AT A PROTEIN-PROTEIN INTERFACE Descriptor: PROTEIN (BARNASE), PROTEIN (BARSTAR) Authors: Vaughan, C.K, Buckle, A.M, Fersht, A.R. Deposit date: 1998-12-01 Release date: 1998-12-09 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural response to mutation at a protein-protein interface. J.Mol.Biol., 286, 1999
2DYJ	Crystal structure of ribosome-binding factor A from Thermus thermophilus HB8 Descriptor: Ribosome-binding factor A Authors: Kawazoe, M, Takemoto, C, Nakayama-Ushikoshi, R, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-09-14 Release date: 2007-03-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.84 Å) Cite: Structural aspects of RbfA action during small ribosomal subunit assembly. Mol.Cell, 28, 2007
3MDF	Crystal structure of the RRM domain of Cyclophilin 33 Descriptor: Peptidyl-prolyl cis-trans isomerase E Authors: Hom, R.A, Chang, P.Y, Roy, S, Mussleman, C.A, Glass, K.C, Seleznevia, A.I, Gozani, O, Ismagilov, R.F, Cleary, M.L, Kutateladze, T.G. Deposit date: 2010-03-30 Release date: 2010-05-12 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Molecular mechanism of MLL PHD3 and RNA recognition by the Cyp33 RRM domain. J.Mol.Biol., 400, 2010
1WVN	Crystal Structure of domain 3 of human alpha polyC binding protein Descriptor: Poly(rC)-binding protein 1 Authors: Wilce, M.C.J, Wilce, J.A, Sidiqu, M. Deposit date: 2004-12-17 Release date: 2005-04-05 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure and RNA binding of the third KH domain of poly(C)-binding protein 1. Nucleic Acids Res., 33, 2005
5VWQ	E.coli Aspartate aminotransferase-(1R,3S,4S)-3-amino-4-fluorocyclopentane-1-carboxylic acid (FCP) Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aspartate aminotransferase Authors: Mascarenhas, R, Lehrer, H, Liu, D, Ringe, D. Deposit date: 2017-05-22 Release date: 2017-08-30 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Selective Targeting by a Mechanism-Based Inactivator against Pyridoxal 5'-Phosphate-Dependent Enzymes: Mechanisms of Inactivation and Alternative Turnover. Biochemistry, 56, 2017
6SHW	N-terminal domain of Drosophila X Virus VP3 Descriptor: SULFATE ION, Structural polyprotein Authors: Ferrero, D.S, Garriga, D, Guerra, P, Uson, I, Verdaguer, N. Deposit date: 2019-08-08 Release date: 2020-11-18 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure and dsRNA-binding activity of the Birnavirus Drosophila X Virus VP3 protein. J.Virol., 2020
6SI6	N-terminal domain of Drosophila X virus VP3 Descriptor: GLYCEROL, IMIDAZOLE, Structural polyprotein Authors: Ferrero, D.S, Garriga, D, Guerra, P, Uson, I, Verdaguer, N. Deposit date: 2019-08-08 Release date: 2020-11-18 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.98 Å) Cite: Structure and dsRNA-binding activity of the Birnavirus Drosophila X Virus VP3 protein. J.Virol., 2020
2H3W	Crystal structure of the S554A/M564G mutant of murine carnitine acetyltransferase in complex with hexanoylcarnitine and CoA Descriptor: (R)-3-CARBOXY-2-(HEXANOYLOXY)-N,N,N-TRIMETHYLPROPAN-1-AMINIUM, COENZYME A, carnitine acetyltransferase Authors: Hsiao, Y.S, Jogl, G, Tong, L. Deposit date: 2006-05-23 Release date: 2006-08-01 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates J.Biol.Chem., 281, 2006
2M09	Structure, phosphorylation and U2AF65 binding of the Nterminal Domain of splicing factor 1 during 3 splice site Recognition Descriptor: Splicing factor 1 Authors: Madl, T, Sattler, M, Zhang, Y, Bagdiul, I, Kern, T, Kang, H, Zou, P, Maeusbacher, N, Sieber, S.A, Kraemer, A. Deposit date: 2012-10-22 Release date: 2013-01-30 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structure, phosphorylation and U2AF65 binding of the N-terminal domain of splicing factor 1 during 3'-splice site recognition. Nucleic Acids Res., 41, 2013
5C94	Infectious bronchitis virus nsp9 Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Non-structural protein 9 Authors: Chen, C, Dou, Y, Yang, H, Su, D. Deposit date: 2015-06-26 Release date: 2016-06-29 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.438 Å) Cite: Structural basis for dimerization and RNA binding of avian infectious bronchitis virus nsp9. Protein Sci., 26, 2017
7SVU	TnsBctd-TnsC-TniQ complex Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (28-MER), DNA (29-MER), ... Authors: Park, J, Tsai, A.W.T, Kellogg, E.H. Deposit date: 2021-11-19 Release date: 2022-11-23 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structures of the holo CRISPR RNA-guided transposon integration complex Nature, 613, 2023
7Y8T	Structure of Cas7-11-crRNA in complex with TPR-CHAT Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (37-MER), ... Authors: Wang, S, Guo, M, Zhu, Y, Huang, Z. Deposit date: 2022-06-24 Release date: 2023-06-28 Last modified: 2024-01-10 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-EM structure of the type III-E CRISPR-Cas effector gRAMP in complex with TPR-CHAT. Cell Res., 32, 2022
7JLZ	Crystal structure of 30S ribosomal A1408 methyltransferase from an uncultured bacterium (UncKam) Descriptor: 16S rRNA methylase, SULFATE ION Authors: Nosrati, M, Conn, G.L. Deposit date: 2020-07-30 Release date: 2021-08-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.64 Å) Cite: Roles of conserved tryptophans in substrate recognition and catalysis by the aminoglycoside-resistance 16S rRNA (m1A1408) rRNA methyltransferases To be published
7P08	Solution structure of the human SF3A1 ubiquitin-like domain Descriptor: Isoform 1 of Splicing factor 3A subunit 1 Authors: de Vries, T, Campagne, S, Allain, F.H.T. Deposit date: 2021-06-29 Release date: 2022-02-09 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Sequence-specific RNA recognition by an RGG motif connects U1 and U2 snRNP for spliceosome assembly. Proc.Natl.Acad.Sci.USA, 119, 2022
8G1Q	Co-crystal structure of Compound 1 in complex with the bromodomain of human SMARCA4 and pVHL:ElonginC:ElonginB Descriptor: DI(HYDROXYETHYL)ETHER, Elongin-B, Elongin-C, ... Authors: Ghimire Rijal, S, Wurz, R.P, Vaish, A. Deposit date: 2023-02-02 Release date: 2023-07-26 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (3.73 Å) Cite: Affinity and cooperativity modulate ternary complex formation to drive targeted protein degradation. Nat Commun, 14, 2023
6TEO	Crystal structure of a yeast Snu114-Prp8 complex Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Pre-mRNA-splicing factor 8, ... Authors: Ganichkin, O, Jia, J, Loll, B, Absmeier, E, Wahl, M.C. Deposit date: 2019-11-12 Release date: 2020-03-18 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (3.1 Å) Cite: A Snu114-GTP-Prp8 module forms a relay station for efficient splicing in yeast. Nucleic Acids Res., 48, 2020

<564565566567568569570571572573574575576577578579>