3LI0
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![BU of 3li0 by Molmil](/molmil-images/mine/3li0) | Crystal structure of the mutant R203A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP | Descriptor: | 1-(5'-PHOSPHO-BETA-D-RIBOFURANOSYL)BARBITURIC ACID, Orotidine 5'-phosphate decarboxylase | Authors: | Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. | Deposit date: | 2010-01-23 | Release date: | 2010-06-16 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
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3LTD
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![BU of 3ltd by Molmil](/molmil-images/mine/3ltd) | X-ray structure of a non-biological ATP binding protein determined at 2.8 A by multi-wavelength anomalous dispersion | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ATP BINDING PROTEIN-DX, CHLORIDE ION, ... | Authors: | Simmons, C.R, Magee, C.L, Allen, J.P, Chaput, J.C. | Deposit date: | 2010-02-15 | Release date: | 2010-09-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins. Biochemistry, 49, 2010
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3LTC
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![BU of 3ltc by Molmil](/molmil-images/mine/3ltc) | X-ray structure of a non-biological ATP binding protein determined in the presence of 10 mM ATP at 2.0 A by multi-wavelength anomalous dispersion | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, ATP BINDING PROTEIN-DX, CHLORIDE ION, ... | Authors: | Simmons, C.R, Magee, C.L, Allen, J.P, Chaput, J.C. | Deposit date: | 2010-02-15 | Release date: | 2010-09-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins. Biochemistry, 49, 2010
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3LTA
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![BU of 3lta by Molmil](/molmil-images/mine/3lta) | Crystal structure of a non-biological ATP binding protein with a TYR-PHE mutation within the ligand binding domain | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, ATP BINDING PROTEIN-DX, CHLORIDE ION, ... | Authors: | Simmons, C.R, Magee, C.L, Allen, J.P, Chaput, J.C. | Deposit date: | 2010-02-15 | Release date: | 2010-09-22 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins. Biochemistry, 49, 2010
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7BQS
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![BU of 7bqs by Molmil](/molmil-images/mine/7bqs) | Solution NMR structure of fold-U Nomur; de novo designed protein with an asymmetric all-alpha topology | Descriptor: | Nomur | Authors: | Kobayashi, N, Nagashima, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N. | Deposit date: | 2020-03-25 | Release date: | 2021-04-07 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Design of complicated all-alpha protein structures Nat.Struct.Mol.Biol., 2024
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7BQR
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![BU of 7bqr by Molmil](/molmil-images/mine/7bqr) | Solution NMR structure of fold-K Mussoc; de novo designed protein with an asymmetric all-alpha topology | Descriptor: | Mussoc | Authors: | Kobayashi, N, Nagashima, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N. | Deposit date: | 2020-03-25 | Release date: | 2021-04-07 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Design of complicated all-alpha protein structures Nat.Struct.Mol.Biol., 2024
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5HKN
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![BU of 5hkn by Molmil](/molmil-images/mine/5hkn) | Crystal structure de novo designed fullerene organizing protein complex with fullerene | Descriptor: | (C_{60}-I_{h})[5,6]fullerene, fullerene organizing protein | Authors: | Paul, J, Acharya, R, Kim, K.-H, Kim, Y.H, Kim, N.H, Grigoryan, G, DeGardo, W.F. | Deposit date: | 2016-01-14 | Release date: | 2016-05-04 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.761 Å) | Cite: | Protein-directed self-assembly of a fullerene crystal. Nat Commun, 7, 2016
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5HKR
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![BU of 5hkr by Molmil](/molmil-images/mine/5hkr) | Crystal structure of de novo designed fullerene organising protein complex with fullerene | Descriptor: | (C_{60}-I_{h})[5,6]fullerene, fullerene organizing protein | Authors: | Acharya, R, Kim, Y.H, Grigoryan, G, DeGardo, W.F. | Deposit date: | 2016-01-14 | Release date: | 2016-05-04 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Protein-directed self-assembly of a fullerene crystal. Nat Commun, 7, 2016
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7MWQ
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![BU of 7mwq by Molmil](/molmil-images/mine/7mwq) | Structure of De Novo designed beta sheet heterodimer LHD29A53/B53 | Descriptor: | LHD29A53, LHD29B53 | Authors: | Bera, A.K, Sahtoe, D.D, Kang, A, Praetorius, F, Baker, D. | Deposit date: | 2021-05-17 | Release date: | 2022-01-19 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.56 Å) | Cite: | Reconfigurable asymmetric protein assemblies through implicit negative design. Science, 375, 2022
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7MWR
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![BU of 7mwr by Molmil](/molmil-images/mine/7mwr) | Structure of De Novo designed beta sheet heterodimer LHD101A53/B4 | Descriptor: | LHD101A54, LHD101B4, MALONATE ION | Authors: | Bera, A.K, Sahtoe, D.D, Kang, A, Praetorius, F, Baker, D. | Deposit date: | 2021-05-17 | Release date: | 2022-01-19 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Reconfigurable asymmetric protein assemblies through implicit negative design. Science, 375, 2022
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8C3W
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![BU of 8c3w by Molmil](/molmil-images/mine/8c3w) | Crystal structure of a computationally designed heme binding protein, dnHEM1 | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ... | Authors: | Ortmayer, M, Levy, C. | Deposit date: | 2022-12-29 | Release date: | 2023-07-05 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Design of Heme Enzymes with a Tunable Substrate Binding Pocket Adjacent to an Open Metal Coordination Site. J.Am.Chem.Soc., 145, 2023
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4DAC
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![BU of 4dac by Molmil](/molmil-images/mine/4dac) | |
6XI6
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![BU of 6xi6 by Molmil](/molmil-images/mine/6xi6) | Hierarchical design of multi-scale protein complexes by combinatorial assembly of oligomeric helical bundle and repeat protein building blocks | Descriptor: | helical fusion design | Authors: | Bera, A.K, Hsia, Y, Kang, A.S, Shankaran, B, Baker, D. | Deposit date: | 2020-06-19 | Release date: | 2021-06-02 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.69 Å) | Cite: | Design of multi-scale protein complexes by hierarchical building block fusion. Nat Commun, 12, 2021
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6XH5
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![BU of 6xh5 by Molmil](/molmil-images/mine/6xh5) | |
6XR1
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![BU of 6xr1 by Molmil](/molmil-images/mine/6xr1) | |
6XR2
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![BU of 6xr2 by Molmil](/molmil-images/mine/6xr2) | |
5WKP
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![BU of 5wkp by Molmil](/molmil-images/mine/5wkp) | |
6GYB
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![BU of 6gyb by Molmil](/molmil-images/mine/6gyb) | Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri | Descriptor: | VirB10 protein, VirB7, VirB9 protein | Authors: | Sgro, G.G, Costa, T.R.D, Farah, C.S, Waksman, G. | Deposit date: | 2018-06-28 | Release date: | 2018-10-24 | Last modified: | 2019-12-11 | Method: | ELECTRON MICROSCOPY (3.28 Å) | Cite: | Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri. Nat Microbiol, 3, 2018
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7BO9
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![BU of 7bo9 by Molmil](/molmil-images/mine/7bo9) | |
7BO8
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![BU of 7bo8 by Molmil](/molmil-images/mine/7bo8) | A hexameric de novo coiled-coil assembly: CC-Type2-(VaYd)4-Y3F-W19(BrPhe)-Y24F. | Descriptor: | 1,2-ETHANEDIOL, CC-Type2-(VaYd)4-Y3F-W19(BrPhe)-Y24F, OXAMIC ACID | Authors: | Rhys, G.G, Brady, R.L, Woolfson, D.N. | Deposit date: | 2021-01-24 | Release date: | 2021-05-19 | Method: | X-RAY DIFFRACTION (1.84 Å) | Cite: | How Coiled-Coil Assemblies Accommodate Multiple Aromatic Residues. Biomacromolecules, 22, 2021
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7BOA
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![BU of 7boa by Molmil](/molmil-images/mine/7boa) | |
5WLW
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![BU of 5wlw by Molmil](/molmil-images/mine/5wlw) | |
8USK
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![BU of 8usk by Molmil](/molmil-images/mine/8usk) | |
8USE
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![BU of 8use by Molmil](/molmil-images/mine/8use) | |
8USI
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![BU of 8usi by Molmil](/molmil-images/mine/8usi) | |