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4GNW
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BU of 4gnw by Molmil
Crystal structure of nitrophorin 4 triple mutant complex with ammonia
Descriptor: AMMONIA, Nitrophorin-4, PHOSPHATE ION, ...
Authors:Weichsel, A, Issaian, A.V, Montfort, W.R.
Deposit date:2012-08-17
Release date:2013-09-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structures of nitrophorin 4 triple mutant
To be Published
8T18
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BU of 8t18 by Molmil
Cryo-EM structure of dodecameric hub domain of CaMKII beta
Descriptor: Venus-tagged CaMKII Alpha Association Domain
Authors:Chien, C.-T, Chiu, W, Khan, S.
Deposit date:2023-06-02
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Hub stability in the calcium calmodulin-dependent protein kinase II.
Commun Biol, 7, 2024
3UPX
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BU of 3upx by Molmil
Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with inhibitor UW1300
Descriptor: Calmodulin-domain protein kinase 1, [2-amino-1-(piperidin-4-ylmethyl)-1H-benzimidazol-6-yl](phenyl)methanone
Authors:Merritt, E.A, Larson, E.T.
Deposit date:2011-11-18
Release date:2012-03-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Multiple Determinants for Selective Inhibition of Apicomplexan Calcium-Dependent Protein Kinase CDPK1.
J.Med.Chem., 55, 2012
7VPQ
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BU of 7vpq by Molmil
Structures of a deltacoronavirus spike protein bound to porcine and human receptors indicate the risk of virus adaptation to humans
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ji, W, Xu, Y, Zhang, S.
Deposit date:2021-10-17
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of a deltacoronavirus spike protein bound to porcine and human receptors.
Nat Commun, 13, 2022
4UPA
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BU of 4upa by Molmil
Crystal structure of Entamoeba histolytica lysyl-tRNA synthetase in complex with AMPPNP
Descriptor: LYSINE--TRNA LIGASE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Bonnefond, L, Nureki, O.
Deposit date:2014-06-14
Release date:2014-10-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Crystal Structures of Entamoeba Histolytica Lysyl-tRNA Synthetase Reveal Conformational Changes Upon Lysine Binding and a Specific Helix Bundle Domain.
FEBS Lett., 588, 2014
6R60
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BU of 6r60 by Molmil
asymmetric antiparallel assembly of two 5-bladed beta-propeller fragments
Descriptor: WD-40 repeat protein
Authors:Afanasieva, E, Lupas, A.N, Hartmann, M.D.
Deposit date:2019-03-26
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural diversity of oligomeric beta-propellers with different numbers of identical blades.
Elife, 8, 2019
4XHN
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BU of 4xhn by Molmil
Bacillus thuringiensis ParM with AMPPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Uncharacterized protein
Authors:Jiang, S.M, Robinson, R.C.
Deposit date:2015-01-06
Release date:2016-03-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A novel plasmid-segregating actin-like protein from Bacillus thuringiensis forms dynamically unstable tubules
to be published
4IIR
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BU of 4iir by Molmil
Crystal Structure of AMPPNP-bound Human PRPF4B kinase domain
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION, ...
Authors:Mechin, I, Haas, K, Chen, X, Zhang, Y, McLean, L.
Deposit date:2012-12-20
Release date:2013-08-28
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evaluation of Cancer Dependence and Druggability of PRP4 Kinase Using Cellular, Biochemical, and Structural Approaches.
J.Biol.Chem., 288, 2013
8T15
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BU of 8t15 by Molmil
Cryo-EM structure of dodecameric hub domain of CaMKII alpha
Descriptor: Venus-tagged CaMKII Alpha Association Domain
Authors:Chien, C.-T, Chiu, W, Khan, S.
Deposit date:2023-06-01
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Hub stability in the calcium calmodulin-dependent protein kinase II.
Commun Biol, 7, 2024
3UM0
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BU of 3um0 by Molmil
Crystal structure of the Brox Bro1 domain in complex with the C-terminal tail of CHMP5
Descriptor: BRO1 domain-containing protein BROX, Charged multivesicular body protein 5, GLYCEROL
Authors:Jiang, J.S, Mu, R.L, Xiao, T.
Deposit date:2011-11-11
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:Two Distinct Binding Modes Define the Interaction of Brox with the C-Terminal Tails of CHMP5 and CHMP4B.
Structure, 20, 2012
8T17
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BU of 8t17 by Molmil
Cryo-EM structure of tetradecameric hub domain of CaMKII beta
Descriptor: Venus-tagged CaMKII Beta Association Domain
Authors:Chien, C.-T, Chiu, W, Khan, S.
Deposit date:2023-06-02
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Hub stability in the calcium calmodulin-dependent protein kinase II.
Commun Biol, 7, 2024
3V5T
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BU of 3v5t by Molmil
Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with inhibitor UW1299
Descriptor: 1-[(2S)-2-(dimethylamino)-3-methylbutyl]-3-(6-ethoxynaphthalen-2-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Calmodulin-domain protein kinase 1
Authors:Merritt, E.A, Larson, E.T.
Deposit date:2011-12-16
Release date:2012-03-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Multiple Determinants for Selective Inhibition of Apicomplexan Calcium-Dependent Protein Kinase CDPK1.
J.Med.Chem., 55, 2012
3UM1
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BU of 3um1 by Molmil
Crystal structure of the Brox Bro1 domain in complex with the C-terminal tail of CHMP5
Descriptor: BRO1 domain-containing protein BROX, Charged multivesicular body protein 5, GLYCEROL
Authors:Jiang, J.S, Mu, R.L, Xiao, T.
Deposit date:2011-11-11
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.708 Å)
Cite:Two Distinct Binding Modes Define the Interaction of Brox with the C-Terminal Tails of CHMP5 and CHMP4B.
Structure, 20, 2012
8SYG
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BU of 8syg by Molmil
Cryo-EM structure of tetradecameric hub domain of CaMKII alpha
Descriptor: Venus-tagged CaMKII Alpha Association Domain
Authors:Chien, C.-T, Chiu, W, Khan, S.
Deposit date:2023-05-25
Release date:2024-06-19
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Hub stability in the calcium calmodulin-dependent protein kinase II.
Commun Biol, 7, 2024
7YGI
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BU of 7ygi by Molmil
Crystal structure of p53 DBD domain in complex with azurin
Descriptor: Azurin, Cellular tumor antigen p53, PHOSPHATE ION, ...
Authors:Jiang, W.X, Zuo, J.Q, Hu, J.J, Chen, X.Q, Ma, L.X, Liu, Z, Xing, Q.
Deposit date:2022-07-11
Release date:2023-02-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of bacterial effector protein azurin targeting tumor suppressor p53 and inhibiting its ubiquitination.
Commun Biol, 6, 2023
6RUQ
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BU of 6ruq by Molmil
Structure of GluA2cryst in complex the antagonist ZK200775 and the negative allosteric modulator GYKI53655 at 4.65 A resolution
Descriptor: (8R)-5-(4-aminophenyl)-N,8-dimethyl-8,9-dihydro-2H,7H-[1,3]dioxolo[4,5-h][2,3]benzodiazepine-7-carboxamide, Glutamate receptor 2, beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Krintel, C, Venskutonyte, R, Mirza, O.A, Gajhede, M, Kastrup, J.S.
Deposit date:2019-05-28
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (4.65 Å)
Cite:Binding of a negative allosteric modulator and competitive antagonist can occur simultaneously at the ionotropic glutamate receptor GluA2.
Febs J., 288, 2021
4ZEL
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BU of 4zel by Molmil
Human dopamine beta-hydroxylase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, ...
Authors:Vendelboe, T.V, Harris, P, Christensen, H.E.M, Harlos, K, Walter, T, Zhao, Y, Omari, K.
Deposit date:2015-04-20
Release date:2016-04-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of human dopamine beta-hydroxylase at 2.9 angstrom resolution.
Sci Adv, 2, 2016
4V68
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BU of 4v68 by Molmil
T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Schuette, J.-C, Spahn, C.M.T.
Deposit date:2008-12-11
Release date:2014-07-09
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:GTPase activation of elongation factor EF-Tu by the ribosome during decoding
Embo J., 28, 2009
5AGA
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BU of 5aga by Molmil
Crystal structure of the Helicase domain of human DNA polymerase theta in complex with AMPPNP
Descriptor: CITRATE ANION, DNA POLYMERASE THETA, MAGNESIUM ION, ...
Authors:Newman, J.A, Cooper, C.D.O, Aitkenhead, H, Pinkas, D.M, Kupinska, K, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2015-01-29
Release date:2015-02-25
Last modified:2015-12-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the Helicase Domain of DNA Polymerase Theta Reveals a Possible Role in the Microhomology-Mediated End-Joining Pathway.
Structure, 23, 2015
5AI7
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BU of 5ai7 by Molmil
ParM doublet model
Descriptor: PLASMID SEGREGATION PROTEIN PARM
Authors:Bharat, T.A.M, Murshudov, G.N, Sachse, C, Lowe, J.
Deposit date:2015-02-12
Release date:2015-04-22
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY
Cite:Structures of Actin-Like Parm Filaments Show Architecture of Plasmid-Segregating Spindles
Nature, 523, 2015
5DQG
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BU of 5dqg by Molmil
Crystal Structure of Human DNA Polymerase Eta Inserting dAMPNPP Opposite O4-Ethylthymidine
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(5EJ)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Patra, A, OFlaherty, D.K, Egli, M.
Deposit date:2015-09-14
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Lesion Orientation ofO4-Alkylthymidine Influences Replication by Human DNA Polymeraseeta.
Chem Sci, 7, 2016
8TJQ
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BU of 8tjq by Molmil
Tetrahymena Ribozyme scaffolded Zika Virus xrRNA
Descriptor: MAGNESIUM ION, RNA (440-MER)
Authors:Langeberg, C.J, Kieft, J.S.
Deposit date:2023-07-24
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A generalizable scaffold-based approach for structure determination of RNAs by cryo-EM.
Nucleic Acids Res., 51, 2023
8TJU
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BU of 8tju by Molmil
Tetrahymena Ribozyme scaffolded TABV xrRNA
Descriptor: DNA/RNA (416-MER), MAGNESIUM ION
Authors:Langeberg, C.J, Kieft, J.S.
Deposit date:2023-07-24
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:A generalizable scaffold-based approach for structure determination of RNAs by cryo-EM.
Nucleic Acids Res., 51, 2023
8TJV
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BU of 8tjv by Molmil
Tetrahymena Ribozyme scaffolded Fluoride riboswitch
Descriptor: FLUORIDE ION, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Langeberg, C.J, Kieft, J.S.
Deposit date:2023-07-24
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:A generalizable scaffold-based approach for structure determination of RNAs by cryo-EM.
Nucleic Acids Res., 51, 2023
8TJX
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BU of 8tjx by Molmil
Tetrahymena Ribozyme cryo-EM scaffold
Descriptor: MAGNESIUM ION, RNA (440-MER)
Authors:Langeberg, C.J, Kieft, J.S.
Deposit date:2023-07-24
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:A generalizable scaffold-based approach for structure determination of RNAs by cryo-EM.
Nucleic Acids Res., 51, 2023

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