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5HBB
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BU of 5hbb by Molmil
Crystal structure of shaft pilin spaA from Lactobacillus rhamnosus GG - E139A mutant
Descriptor: 1,2-ETHANEDIOL, Cell surface protein SpaA, SODIUM ION, ...
Authors:Chaurasia, P, Pratap, S, von Ossowski, I, Palva, A, Krishnan, V.
Deposit date:2015-12-31
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit
Sci Rep, 6, 2016
5Z72
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BU of 5z72 by Molmil
Crystal structure of CcpC regulatory domain in complex with citrate from Bacillus amyloliquefaciens
Descriptor: CITRATE ANION, CcpC, SODIUM ION
Authors:Chen, J, Wang, L, Shang, F, Xu, Y.
Deposit date:2018-01-26
Release date:2018-02-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mechanistic insights from the crystal structures of a catabolite control protein C on citrate-responsive mechanism
To Be Published
4TVO
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BU of 4tvo by Molmil
Structure of Malate Dehydrogenase from Mycobacterium tuberculosis
Descriptor: Malate dehydrogenase, SODIUM ION, SULFATE ION
Authors:Ferraris, D.M, Rizzi, M.
Deposit date:2014-06-27
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of citrate synthase and malate dehydrogenase of Mycobacterium tuberculosis.
Proteins, 83, 2015
6TBF
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BU of 6tbf by Molmil
Structure of a beta galactosidase with inhibitor
Descriptor: (1~{S},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-5-(octylamino)cyclopentane-1,2,3-triol, ACETATE ION, Beta-galactosidase, ...
Authors:Offen, W, Davies, G.
Deposit date:2019-11-01
Release date:2020-08-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanistic Insights into the Chaperoning of Human Lysosomal-Galactosidase Activity: Highly Functionalized Aminocyclopentanes and C -5a-Substituted Derivatives of 4- epi -Isofagomine.
Molecules, 25, 2020
2OTL
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BU of 2otl by Molmil
Girodazole bound to the large subunit of Haloarcula marismortui
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Blaha, G, Schroeder, S.J, Tirado-Rives, J.
Deposit date:2007-02-08
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Structures of Antibiotics Bound to the E Site Region of the 50 S Ribosomal Subunit of Haloarcula marismortui: 13-Deoxytedanolide and Girodazole.
J.Mol.Biol., 367, 2007
5G3P
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BU of 5g3p by Molmil
Bacillus cereus formamidase (BceAmiF) acetylated at the active site.
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Gavira, J.A, Conejero-Muriel, M, Martinez-Rodriguez, S.
Deposit date:2016-04-29
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A novel cysteine carbamoyl-switch is responsible for the inhibition of formamidase, a nitrilase superfamily member.
Arch.Biochem.Biophys., 662, 2019
2OTJ
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BU of 2otj by Molmil
13-deoxytedanolide bound to the large subunit of Haloarcula marismortui
Descriptor: 13-DEOXYTEDANOLIDE, 23S ribosomal RNA, 50S ribosomal protein L10E, ...
Authors:Blaha, G, Schroeder, S.J, Tirado-Rives, J.
Deposit date:2007-02-08
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Structures of Antibiotics Bound to the E Site Region of the 50 S Ribosomal Subunit of Haloarcula marismortui: 13-Deoxytedanolide and Girodazole.
J.Mol.Biol., 367, 2007
6KD1
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BU of 6kd1 by Molmil
Room temperature structure of lysozyme delivered in agarose by serial millisecond crystallography
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Nam, K.H.
Deposit date:2019-06-30
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Stable sample delivery in viscous media via a capillary for serial crystallography.
J.Appl.Crystallogr., 53, 2020
6KOK
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BU of 6kok by Molmil
Crystal Structure of SNX11/SNX10-PXe Chimera
Descriptor: CHLORIDE ION, SODIUM ION, Sorting nexin-11,Uncharacterized protein SNX10
Authors:Xu, T, Liu, J.
Deposit date:2019-08-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular Basis for PI(3,5)P2Recognition by SNX11, a Protein Involved in Lysosomal Degradation and Endosome Homeostasis Regulation.
J.Mol.Biol., 432, 2020
6KTW
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BU of 6ktw by Molmil
structure of EanB with hercynine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Wu, L, Liu, P.H, Zhou, J.H.
Deposit date:2019-08-29
Release date:2020-08-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.931 Å)
Cite:Single-Step Replacement of an Unreactive C-H Bond by a C-S Bond Using Polysulfide as the Direct Sulfur Source in the Anaerobic Ergothioneine Biosynthesis
Acs Catalysis, 10, 2020
6KQU
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BU of 6kqu by Molmil
Crystal structure of phospholipase A2
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Hou, S, Xu, T, Liu, J.
Deposit date:2019-08-18
Release date:2020-08-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Residue Asn21 acts as a switch for calcium binding to modulate the enzymatic activity of human phospholipase A2 group IIE.
Biochimie, 176, 2020
6L9C
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BU of 6l9c by Molmil
Neutron structure of copper amine oxidase from Arthrobacter glibiformis at pD 7.4
Descriptor: COPPER (II) ION, Phenylethylamine oxidase, SODIUM ION
Authors:Murakawa, T, Kurihara, K, Shoji, M, Shibazaki, C, Sunami, T, Tamada, T, Yano, N, Yamada, T, Kusaka, K, Suzuki, M, Shigeta, Y, Kuroki, R, Hayashi, H, Yano, Y, Tanizawa, K, Adachi, M, Okajima, T.
Deposit date:2019-11-08
Release date:2020-04-29
Last modified:2023-11-22
Method:NEUTRON DIFFRACTION (1.14 Å), X-RAY DIFFRACTION
Cite:Neutron crystallography of copper amine oxidase reveals keto/enolate interconversion of the quinone cofactor and unusual proton sharing.
Proc.Natl.Acad.Sci.USA, 117, 2020
6L18
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BU of 6l18 by Molmil
XFEL structure of T4dCH D179N mutant complex with natively expressed dTMP
Descriptor: Deoxycytidylate 5-hydroxymethyltransferase, IODIDE ION, SODIUM ION, ...
Authors:Park, S.H, Song, H.K.
Deposit date:2019-09-27
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A host dTMP-bound structure of T4 phage dCMP hydroxymethylase mutant using an X-ray free electron laser.
Sci Rep, 9, 2019
6L4P
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BU of 6l4p by Molmil
Crystal structure of the complex between the axonemal outer-arm dynein light chain-1 and microtubule binding domain of gamma heavy chain
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dynein light chain 1, axonemal, ...
Authors:Toda, A, Nishikawa, Y, Tanaka, H, Yagi, T, Kurisu, G.
Deposit date:2019-10-19
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:The complex of outer-arm dynein light chain-1 and the microtubule-binding domain of the gamma heavy chain shows how axonemal dynein tunes ciliary beating.
J.Biol.Chem., 295, 2020
6KV0
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BU of 6kv0 by Molmil
Ferredoxin I from C. reinhardtii, high X-ray dose
Descriptor: BENZAMIDINE, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Onishi, Y, Kurisu, G, Tanaka, H.
Deposit date:2019-09-03
Release date:2020-05-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:X-ray dose-dependent structural changes of the [2Fe-2S] ferredoxin from Chlamydomonas reinhardtii.
J.Biochem., 167, 2020
6KUM
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BU of 6kum by Molmil
Ferredoxin I from C. reinhardtii, low X-ray dose
Descriptor: BENZAMIDINE, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Onishi, Y, Kurisu, G, Tanaka, H.
Deposit date:2019-09-02
Release date:2020-05-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:X-ray dose-dependent structural changes of the [2Fe-2S] ferredoxin from Chlamydomonas reinhardtii.
J.Biochem., 167, 2020
6LBL
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BU of 6lbl by Molmil
Crystal structure of IMP-1 metallo-beta-lactamase in complex with NO9 inhibitor
Descriptor: 2,5-dimethyl-4-sulfamoyl-furan-3-carboxylic acid, Metallo-beta-lactamase type 2, SODIUM ION, ...
Authors:Wachino, J.
Deposit date:2019-11-14
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Sulfamoyl Heteroarylcarboxylic Acids as Promising Metallo-beta-Lactamase Inhibitors for Controlling Bacterial Carbapenem Resistance.
Mbio, 11, 2020
6LFW
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BU of 6lfw by Molmil
Crystal structure of PCB4scFv(hN56D) in complex with PCB#126
Descriptor: 1,2,3-tris(chloranyl)-5-(3-chloranyl-4-methoxy-phenyl)benzene, PCB4scFv(hN56D), SODIUM ION
Authors:Nakamura, T, Yamagata, Y, Morioka, H.
Deposit date:2019-12-03
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Crystal structure of PCB4scFv(hN56D) in complex with PCB#126
To Be Published
8E6K
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BU of 8e6k by Molmil
2H08 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2H08 fragment antigen binding heavy chain, 2H08 fragment antigen binding light chain, ...
Authors:Turner, H.L, Ozorowski, G, Ward, A.B.
Deposit date:2022-08-22
Release date:2023-08-09
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Human anti-N1 monoclonal antibodies elicited by pandemic H1N1 virus infection broadly inhibit HxN1 viruses in vitro and in vivo.
Immunity, 56, 2023
8E6J
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BU of 8e6j by Molmil
3H03 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1)
Descriptor: 3H03 fragment antigen binding heavy chain, 3H03 fragment antigen binding light chain, Neuraminidase
Authors:Turner, H.L, Ozorowski, G, Ward, A.B.
Deposit date:2022-08-22
Release date:2023-08-09
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Human anti-N1 monoclonal antibodies elicited by pandemic H1N1 virus infection broadly inhibit HxN1 viruses in vitro and in vivo.
Immunity, 56, 2023
5GS8
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BU of 5gs8 by Molmil
Crystal structure of TLA-3 extended-spectrum beta-lactamase
Descriptor: Beta-lactamase, CHLORIDE ION, SODIUM ION, ...
Authors:Wachino, J, Jin, W, Arakawa, Y.
Deposit date:2016-08-14
Release date:2017-07-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural Insights into the TLA-3 Extended-Spectrum beta-Lactamase and Its Inhibition by Avibactam and OP0595.
Antimicrob. Agents Chemother., 61, 2017
5C3Y
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BU of 5c3y by Molmil
Structure of human ribokinase crystallized with AMPPNP
Descriptor: AMP PHOSPHORAMIDATE, Ribokinase, SODIUM ION
Authors:Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S.
Deposit date:2015-06-17
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of human ribokinase crystallized with AMPPNP
To Be Published
6B5S
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BU of 6b5s by Molmil
Structure of PfCSP peptide 25 with human antibody CIS42
Descriptor: AMMONIUM ION, CIS42 Fab Heavy chain, CIS42 Fab Light chain, ...
Authors:Pancera, M, Weidle, C.
Deposit date:2017-09-29
Release date:2018-03-21
Last modified:2019-01-09
Method:X-RAY DIFFRACTION (1.983 Å)
Cite:A human monoclonal antibody prevents malaria infection by targeting a new site of vulnerability on the parasite.
Nat. Med., 24, 2018
6TBJ
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BU of 6tbj by Molmil
Structure of a beta galactosidase with inhibitor
Descriptor: 5-(dimethylamino)-~{N}-[6-[(2~{S},3~{R},4~{S},5~{R})-3-(hydroxymethyl)-4,5-bis(oxidanyl)piperidin-2-yl]hexyl]naphthalene-1-sulfonamide, Beta-galactosidase, putative, ...
Authors:Offen, W, Davies, G.
Deposit date:2019-11-01
Release date:2020-08-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanistic Insights into the Chaperoning of Human Lysosomal-Galactosidase Activity: Highly Functionalized Aminocyclopentanes and C -5a-Substituted Derivatives of 4- epi -Isofagomine.
Molecules, 25, 2020
6TBH
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BU of 6tbh by Molmil
Structure of a beta galactosidase with inhibitor
Descriptor: 5-[ethyl(methyl)amino]-~{N}-[6-[[(1~{S},2~{R},3~{S},4~{R})-2-(hydroxymethyl)-3,4-bis(oxidanyl)cyclopentyl]amino]hexyl]naphthalene-1-sulfonamide, ACETATE ION, Beta-galactosidase, ...
Authors:Offen, W, Davies, G.
Deposit date:2019-11-01
Release date:2020-08-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanistic Insights into the Chaperoning of Human Lysosomal-Galactosidase Activity: Highly Functionalized Aminocyclopentanes and C -5a-Substituted Derivatives of 4- epi -Isofagomine.
Molecules, 25, 2020

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PDB entries from 2024-10-09

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