Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4E5H
DownloadVisualize
BU of 4e5h by Molmil
Crystal structure of avian influenza virus PAn bound to compound 3
Descriptor: (2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid, MANGANESE (II) ION, Polymerase protein PA, ...
Authors:DuBois, R.M, Slavish, P.J, Webb, T.R, White, S.W.
Deposit date:2012-03-14
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.158 Å)
Cite:Structural and Biochemical Basis for Development of Influenza Virus Inhibitors Targeting the PA Endonuclease.
Plos Pathog., 8, 2012
4EDZ
DownloadVisualize
BU of 4edz by Molmil
Crystal structure of hH-PGDS with water displacing inhibitor
Descriptor: 4-(3-methylisoquinolin-1-yl)-N-[2-(morpholin-4-yl)ethyl]benzamide, GLUTATHIONE, Hematopoietic prostaglandin D synthase, ...
Authors:Day, J.E, Thorarensen, A, Trujillo, J.I.
Deposit date:2012-03-27
Release date:2012-05-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Investigation of the binding pocket of human hematopoietic prostaglandin (PG) D2 synthase (hH-PGDS): a tale of two waters.
Bioorg.Med.Chem.Lett., 22, 2012
4E5R
DownloadVisualize
BU of 4e5r by Molmil
Crystal Structure of Frog DGCR8 Dimerization Domain
Descriptor: MGC78846 protein
Authors:Guo, F, Senturia, R, Laganowsky, A, Barr, I, Scheidemantle, B.D.
Deposit date:2012-03-14
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dimerization and heme binding are conserved in amphibian and starfish homologues of the microRNA processing protein DGCR8.
Plos One, 7, 2012
4E5T
DownloadVisualize
BU of 4e5t by Molmil
Crystal structure of a putative Mandelate racemase/Muconate lactonizing enzyme (Target PSI-200750) from Labrenzia alexandrii DFL-11
Descriptor: MAGNESIUM ION, Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein
Authors:Kumar, P.R, Bonanno, J, Chowdhury, S, Foti, R, Gizzi, A, Glen, S, Hammonds, J, Hillerich, B, Matikainen, B, Seidel, R, Toro, R, Zencheck, W, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-03-14
Release date:2012-03-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of a putative MR/ML enzyme from Labrenzia alexandrii DFL-11
to be published
4EED
DownloadVisualize
BU of 4eed by Molmil
CorA coiled-coil mutant under Mg2+ presence
Descriptor: MAGNESIUM ION, Magnesium transport protein CorA
Authors:Pfoh, R, Pai, E.F.
Deposit date:2012-03-28
Release date:2012-11-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.92 Å)
Cite:Structural asymmetry in the magnesium channel CorA points to sequential allosteric regulation.
Proc.Natl.Acad.Sci.USA, 109, 2012
4EG0
DownloadVisualize
BU of 4eg0 by Molmil
Crystal Structure of D-alanine--D-alanine ligase from Burkholderia ambifaria
Descriptor: 1,2-ETHANEDIOL, D-alanine--D-alanine ligase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-03-30
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
4HNQ
DownloadVisualize
BU of 4hnq by Molmil
Crystal Structure of the mutant Q97A of Vibrio cholerae CheY3
Descriptor: Chemotaxis protein CheY, MAGNESIUM ION
Authors:Biswas, M, Sen, U, Dasgupta, J.
Deposit date:2012-10-21
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conformational Barrier of CheY3 and Inability of CheY4 to Bind FliM Control the Flagellar Motor Action in Vibrio cholerae.
Plos One, 8, 2013
4HNA
DownloadVisualize
BU of 4hna by Molmil
Kinesin motor domain in the ADP-MG-ALFX state in complex with tubulin and a DARPIN
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) D2, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Gigant, B, Knossow, M.
Deposit date:2012-10-19
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Structure of a kinesin-tubulin complex and implications for kinesin motility.
Nat.Struct.Mol.Biol., 20, 2013
4HR9
DownloadVisualize
BU of 4hr9 by Molmil
Human interleukin 17A
Descriptor: Interleukin-17A
Authors:Liu, S.
Deposit date:2012-10-26
Release date:2013-05-22
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal structures of interleukin 17A and its complex with IL-17 receptor A.
Nat Commun, 4, 2013
3AL4
DownloadVisualize
BU of 3al4 by Molmil
Crystal structure of the swine-origin A (H1N1)-2009 influenza A virus hemagglutinin (HA) reveals similar antigenicity to that of the 1918 pandemic virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Zhang, W, Qi, J.X, Shi, Y, Li, Q, Yan, J.H, Gao, G.F.
Deposit date:2010-07-22
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.872 Å)
Cite:Crystal structure of the swine-origin A (H1N1)-2009 influenza A virus hemagglutinin (HA) reveals similar antigenicity to that of the 1918 pandemic virus
Protein Cell, 1, 2010
3AOD
DownloadVisualize
BU of 3aod by Molmil
Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Descriptor: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, Acriflavine resistance protein B, RIFAMPICIN
Authors:Nakashima, R, Sakurai, K, Yamaguchi, A.
Deposit date:2010-09-23
Release date:2011-11-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3A7B
DownloadVisualize
BU of 3a7b by Molmil
Crystal structure of TLR2-Streptococcus Pneumoniae lipoteichoic acid complex
Descriptor: (2S)-1-({3-O-[2-(acetylamino)-4-amino-2,4,6-trideoxy-beta-D-galactopyranosyl]-alpha-D-glucopyranosyl}oxy)-3-(heptanoyloxy)propan-2-yl (7Z)-pentadec-7-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kang, J.Y, Jin, M.S, Lee, J.-O.
Deposit date:2009-09-20
Release date:2009-11-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Recognition of lipopeptide patterns by Toll-like receptor 2-Toll-like receptor 6 heterodimer
Immunity, 31, 2009
3A9G
DownloadVisualize
BU of 3a9g by Molmil
Crystal Structure of PQQ-dependent sugar dehydrogenase apo-form
Descriptor: CALCIUM ION, Putative uncharacterized protein, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Sakuraba, H, Yokono, K, Yoneda, K, Ohshima, T.
Deposit date:2009-10-26
Release date:2010-09-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Catalytic properties and crystal structure of quinoprotein aldose sugar dehydrogenase from hyperthermophilic archaeon Pyrobaculum aerophilum
Arch.Biochem.Biophys., 502, 2010
3A52
DownloadVisualize
BU of 3a52 by Molmil
Crystal structure of cold-active alkailne phosphatase from psychrophile Shewanella sp.
Descriptor: Cold-active alkaline phosphatase, MAGNESIUM ION, SULFATE ION, ...
Authors:Tsuruta, H, Mikami, B, Higashi, T, Aizono, Y.
Deposit date:2009-07-24
Release date:2010-04-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of cold-active alkaline phosphatase from the psychrophile Shewanella sp.
Biosci.Biotechnol.Biochem., 74, 2010
3A5K
DownloadVisualize
BU of 3a5k by Molmil
Crystal structure of protein-tyrosine phosphatase 1B
Descriptor: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
Authors:Ito, S.
Deposit date:2009-08-08
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Post-translational modification of a non-catalytic Cys121 of PTP1B
To be Published
3AC9
DownloadVisualize
BU of 3ac9 by Molmil
Crystal structure of human NUDT5 complexed with 8-oxo-dGDP and manganese
Descriptor: 2'-deoxy-8-oxoguanosine 5'-(trihydrogen diphosphate), ADP-sugar pyrophosphatase, MANGANESE (II) ION
Authors:Arimori, T, Yamagata, Y.
Deposit date:2009-12-30
Release date:2011-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Diverse substrate recognition and hydrolysis mechanisms of human NUDT5
Nucleic Acids Res., 39, 2011
3ACG
DownloadVisualize
BU of 3acg by Molmil
Crystal Structure of Carbohydrate-Binding Module Family 28 from Clostridium josui Cel5A in complex with cellobiose
Descriptor: Beta-1,4-endoglucanase, CALCIUM ION, GLYCEROL, ...
Authors:Tsukimoto, K, Takada, R, Araki, Y, Suzuki, K, Karita, S, Wakagi, T, Shoun, H, Watanabe, T, Fushinobu, S.
Deposit date:2010-01-04
Release date:2010-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Recognition of cellooligosaccharides by a family 28 carbohydrate-binding module.
Febs Lett., 584, 2010
4HUN
DownloadVisualize
BU of 4hun by Molmil
MATE transporter NorM-NG in complex with R6G and monobody
Descriptor: Multidrug efflux protein, RHODAMINE 6G, protein B
Authors:Lu, M.
Deposit date:2012-11-02
Release date:2013-02-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:Structures of a Na+-coupled, substrate-bound MATE multidrug transporter.
Proc.Natl.Acad.Sci.USA, 110, 2013
3AE4
DownloadVisualize
BU of 3ae4 by Molmil
Crystal structure of porcine heart mitochondrial complex II bound with 2-Iodo-N-methyl-benzamide
Descriptor: 2-iodo-N-methylbenzamide, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Harada, S, Sasaki, T, Shindo, M, Kido, Y, Inaoka, D.K, Omori, J, Osanai, A, Sakamoto, K, Mao, J, Matsuoka, S, Inoue, M, Honma, T, Tanaka, A, Kita, K.
Deposit date:2010-02-04
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal structure of porcine heart mitochondrial complex II bound with 2-Iodo-N-methyl-benzamide
To be Published
3ALA
DownloadVisualize
BU of 3ala by Molmil
Crystal structure of vascular adhesion protein-1 in space group C2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ernberg, K.E, McGrath, A.P, Guss, J.M.
Deposit date:2010-07-29
Release date:2010-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A new crystal form of human vascular adhesion protein 1
Acta Crystallogr.,Sect.F, 66, 2010
3ANG
DownloadVisualize
BU of 3ang by Molmil
Crystal structure of Thermus thermophilus FadR in complex with E. coli-derived dodecyl-CoA
Descriptor: DODECYL-COA, Transcriptional repressor, TetR family
Authors:Agari, Y, Sakamoto, K, Agari, K, Kuramitsu, S, Shinkai, A.
Deposit date:2010-09-01
Release date:2011-03-09
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:TetR-family transcriptional repressor Thermus thermophilus FadR controls fatty acid degradation.
Microbiology, 157, 2011
3AEF
DownloadVisualize
BU of 3aef by Molmil
Crystal structure of porcine heart mitochondrial complex II with an empty quinone-binding pocket
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Harada, S, Sasaki, T, Shindo, M, Kido, Y, Inaoka, D.K, Omori, J, Osanai, A, Sakamoto, K, Mao, J, Matsuoka, S, Inoue, M, Honma, T, Tanaka, A, Kita, K.
Deposit date:2010-02-04
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of porcine heart mitochondrial complex II with an empty quinone-binding pocket
To be Published
4H4J
DownloadVisualize
BU of 4h4j by Molmil
Crystal structure of a N-acetylmuramoyl-L-alanine amidase (BACUNI_02947) from Bacteroides uniformis ATCC 8492 at 1.15 A resolution
Descriptor: hypothetical protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2012-09-17
Release date:2012-10-17
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structure-guided functional characterization of DUF1460 reveals a highly specific NlpC/P60 amidase family.
Structure, 22, 2014
3ADF
DownloadVisualize
BU of 3adf by Molmil
Crystal structure of a monomeric green fluorescent protein, Azami-Green (mAG)
Descriptor: Monomeric Azami Green
Authors:Ebisawa, T, Yamamura, A, Kameda, Y, Hayakawa, K, Nagata, K, Tanokura, M.
Deposit date:2010-01-20
Release date:2010-05-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of mAG, a monomeric mutant of the green fluorescent protein Azami-Green, reveals the structural basis of its stable green emission
Acta Crystallogr.,Sect.F, 66, 2010
4H54
DownloadVisualize
BU of 4h54 by Molmil
Crystal structure of the diguanylate cyclase DgcZ
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Diguanylate cyclase YdeH, GUANOSINE-5'-RP-ALPHA-THIO-TRIPHOSPHATE, ...
Authors:Zaehringer, F, Schirmer, T.
Deposit date:2012-09-18
Release date:2013-07-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure and signaling mechanism of a zinc-sensory diguanylate cyclase.
Structure, 21, 2013

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon