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2IS1
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BU of 2is1 by Molmil
Crystal structure of UvrD-DNA-SO4 complex
Descriptor: 5'-D(*CP*GP*AP*GP*CP*AP*CP*TP*GP*C)-3', 5'-D(*GP*CP*AP*GP*TP*GP*CP*TP*CP*GP*TP*TP*TP*TP*TP*TP*T)-3', DNA helicase II, ...
Authors:Yang, W, Lee, J.Y.
Deposit date:2006-10-16
Release date:2007-01-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke.
Cell(Cambridge,Mass.), 127, 2006
2FU3
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BU of 2fu3 by Molmil
Crystal structure of gephyrin E-domain
Descriptor: gephyrin
Authors:Kim, E.Y, Schindelin, H.
Deposit date:2006-01-25
Release date:2006-03-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Deciphering the structural framework of glycine receptor anchoring by gephyrin.
Embo J., 25, 2006
2IS6
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BU of 2is6 by Molmil
Crystal structure of UvrD-DNA-ADPMgF3 ternary complex
Descriptor: 5'-D(*CP*GP*AP*GP*CP*AP*CP*TP*GP*CP*AP*GP*TP*GP*CP*TP*CP*GP*TP*TP*GP*TP*TP*AP*T)-3', ADENOSINE-5'-DIPHOSPHATE, DNA helicase II, ...
Authors:Yang, W, Lee, J.Y.
Deposit date:2006-10-16
Release date:2007-01-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke.
Cell(Cambridge,Mass.), 127, 2006
2IJM
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BU of 2ijm by Molmil
Crystal Structure of Focal Adhesion Kinase Domain with 2 molecules in the Asymmetric Unit Complexed with ADP and ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Focal Adhesion Kinase 1
Authors:Lee, C.C.
Deposit date:2006-09-29
Release date:2007-08-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.187 Å)
Cite:Crystal Structure of Focal Adhesion Kinase Catalytic Domain Complexed with ATP and Novel 7H-Pyrrolo [2,3-d] pyrimidine Inhibitor Scaffolds
To be Published
2IRU
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BU of 2iru by Molmil
Crystal Structure of the Polymerase Domain from Mycobacterium tuberculosis Ligase D
Descriptor: Putative DNA ligase-like protein Rv0938/MT0965
Authors:Brissett, N.C, Pitcher, R.S, Doherty, A.J.
Deposit date:2006-10-16
Release date:2007-01-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and function of a mycobacterial NHEJ DNA repair polymerase.
J.Mol.Biol., 366, 2007
2IEJ
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BU of 2iej by Molmil
Human Protein Farnesyltransferase Complexed with Inhibitor Compound STN-48 And FPP Analog at 1.8A Resolution
Descriptor: ACETATE ION, METHYL N-{(3S)-1-[(1-METHYL-1H-IMIDAZOL-5-YL)METHYL]-6-PHENYL-1,2,3,4-TETRAHYDROQUINOLIN-3-YL}-N-[(1-METHYL-1H-IMIDAZOL-4-YL)SULFONYL]GLYCINATE, Protein farnesyltransferase subunit beta, ...
Authors:Hast, M.A, Beese, L.S.
Deposit date:2006-09-19
Release date:2007-01-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Resistance mutations at the lipid substrate binding site of Plasmodium falciparum protein farnesyltransferase.
Mol.Biochem.Parasitol., 152, 2007
2IRY
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BU of 2iry by Molmil
Crystal Structure of the Polymerase Domain from Mycobacterium tuberculosis Ligase D with dGTP and Manganese.
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA ligase-like protein Rv0938/MT0965, MANGANESE (II) ION
Authors:Brissett, N.C, Pitcher, R.S, Doherty, A.J.
Deposit date:2006-10-16
Release date:2007-01-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure and function of a mycobacterial NHEJ DNA repair polymerase.
J.Mol.Biol., 366, 2007
2IS4
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BU of 2is4 by Molmil
Crystal structure of UvrD-DNA-ADPNP ternary complex
Descriptor: 25-MER, DNA helicase II, MAGNESIUM ION, ...
Authors:Yang, W, Lee, J.Y.
Deposit date:2006-10-16
Release date:2007-01-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke.
Cell(Cambridge,Mass.), 127, 2006
8J2E
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BU of 8j2e by Molmil
Structure of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus, mutant N940V/K1106W/S1114R in complex with NADP+ and malonate
Descriptor: MALONIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short-chain dehydrogenase/reductase SDR
Authors:Ma, Q, Liu, C.
Deposit date:2023-04-14
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structures of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus
To Be Published
8QK7
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BU of 8qk7 by Molmil
E167K RF2 on E. coli 70S release complex with UAA
Descriptor: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
Authors:Pundir, S, Larsson, D.S.D, Selmer, M, Sanyal, S.
Deposit date:2023-09-14
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:The compensatory mechanism of a naturally evolved E167K RF2 counteracting the loss of RF1 in bacteria
To Be Published
8J2B
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BU of 8j2b by Molmil
Structure of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus, in complex with NADP+ and malonate
Descriptor: MALONIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short-chain dehydrogenase/reductase SDR
Authors:Ma, Q, Liu, C.
Deposit date:2023-04-14
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structures of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus
To Be Published
2K7Y
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BU of 2k7y by Molmil
Solution fold of HIV-1 Virus protein U cytoplasmic domain in the presence of DPC micelles
Descriptor: Protein Vpu
Authors:Wittlich, M, Koenig, B.W, Willbold, D.
Deposit date:2008-08-28
Release date:2009-11-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structural characterization of HIV-1 virus protein U cytoplasmic domain in the presence of dodecylphosphatidylcholine micelles
Febs J., 276, 2009
8QKU
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BU of 8qku by Molmil
SWR1-nucleosome complex in configuration 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein ARP6, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Jalal, A.S.B, Wigley, D.B.
Deposit date:2023-09-18
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Nucleosome flipping drives kinetic proof reading and processivity of histone exchange by yeast SWR1 complex
To Be Published
2K9E
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BU of 2k9e by Molmil
NMR Solution Structure for ShK-192: A Potent KV1.3-Specific Immunosuppressive Polypeptide
Descriptor: Kappa-stichotoxin-She3a
Authors:Galea, C.A.
Deposit date:2008-10-09
Release date:2009-01-20
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Engineering a stable and selective peptide blocker of the Kv1.3 channel in T lymphocytes
Mol.Pharmacol., 75, 2009
2EAV
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BU of 2eav by Molmil
Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ibeta
Descriptor: NICKEL (II) ION, Peptidoglycan recognition protein-I-beta
Authors:Cho, S, Mariuzza, R.A.
Deposit date:2007-02-03
Release date:2007-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the bactericidal mechanism of human peptidoglycan recognition proteins
Proc.Natl.Acad.Sci.Usa, 104, 2007
8QN8
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BU of 8qn8 by Molmil
Mycobacterium smegmatis RNA polymerase in complex with HelD, SigA and RbpA in State II
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Koval, T, Krasny, L, Dohnalek, J, Kouba, T.
Deposit date:2023-09-25
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Molecular insights into RNA polymerase recycling by mycobacterial HelD
To Be Published
8QU6
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BU of 8qu6 by Molmil
Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD and an upstream-fork promoter fragment
Descriptor: DNA 22-MER, DNA 31-MER, DNA-directed RNA polymerase subunit alpha, ...
Authors:Koval, T, Krasny, L, Dohnalek, J, Kouba, T.
Deposit date:2023-10-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Molecular insights into RNA polymerase recycling by mycobacterial HelD
To Be Published
8QKV
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BU of 8qkv by Molmil
SWR1-nucleosome complex in configuration 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein ARP6, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Jalal, A.S.B, Wigley, D.B.
Deposit date:2023-09-18
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Nucleosome flipping drives kinetic proof reading and processivity of histone exchange by yeast SWR1 complex
To Be Published
2K6D
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BU of 2k6d by Molmil
CIN85 Sh3-C domain in complex with ubiquitin
Descriptor: SH3 domain-containing kinase-binding protein 1, Ubiquitin
Authors:Forman-Kay, J, Bezsonova, I.
Deposit date:2008-07-07
Release date:2008-08-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Interactions between the three CIN85 SH3 domains and ubiquitin: implications for CIN85 ubiquitination.
Biochemistry, 47, 2008
8ISO
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BU of 8iso by Molmil
Crystal structure of extended-spectrum class A beta-lactamase, CESS-1
Descriptor: 1,2-ETHANEDIOL, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, Beta-lactamase
Authors:Jeong, B.G, Kim, M.Y, Jeong, C.S, Do, H.W, Lee, J.H, Cha, S.S.
Deposit date:2023-03-21
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Characterization of the extended substrate spectrum of the class A beta-lactamase CESS-1 from Stenotrophomonas sp. and structure-based investigation into its substrate preference.
Int J Antimicrob Agents, 63, 2024
1FV1
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BU of 1fv1 by Molmil
STRUCTURAL BASIS FOR THE BINDING OF AN IMMUNODOMINANT PEPTIDE FROM MYELIN BASIC PROTEIN IN DIFFERENT REGISTERS BY TWO HLA-DR2 ALLELES
Descriptor: GLYCEROL, MAJOR HISTOCOMPATIBILITY COMPLEX ALPHA CHAIN, MAJOR HISTOCOMPATIBILITY COMPLEX BETA CHAIN, ...
Authors:Li, H, Mariuzza, A.R, Li, Y, Martin, R.
Deposit date:2000-09-18
Release date:2000-09-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the binding of an immunodominant peptide from myelin basic protein in different registers by two HLA-DR2 proteins.
J.Mol.Biol., 304, 2000
8ISP
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BU of 8isp by Molmil
Crystal structure of extended-spectrum class A beta-lactamase, CESS-1 E166Q acylated by cephalexin
Descriptor: (R)-2-((R)-((R)-2-amino-2-phenylacetamido)(carboxy)methyl)-5-methyl-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Beta-lactamase
Authors:Jeong, B.G, Kim, M.Y, Jeong, C.S, Do, H.W, Lee, J.H, Cha, S.S.
Deposit date:2023-03-21
Release date:2024-05-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Characterization of the extended substrate spectrum of the class A beta-lactamase CESS-1 from Stenotrophomonas sp. and structure-based investigation into its substrate preference.
Int J Antimicrob Agents, 63, 2024
8ISQ
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BU of 8isq by Molmil
Crystal structure of extended-spectrum class A beta-lactamase, CESS-1 E166Q acylated by ampicillin
Descriptor: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-lactamase, ...
Authors:Jeong, B.G, Kim, M.Y, Jeong, C.S, Do, H.W, Lee, J.H, Cha, S.S.
Deposit date:2023-03-21
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Characterization of the extended substrate spectrum of the class A beta-lactamase CESS-1 from Stenotrophomonas sp. and structure-based investigation into its substrate preference.
Int J Antimicrob Agents, 63, 2024
2K9G
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BU of 2k9g by Molmil
Solution structure of the third SH3 domain of the Cin85 adapter protein
Descriptor: SH3 domain-containing kinase-binding protein 1
Authors:Philippe, D.L, Ladbury, J.E, Pfuhl, M.
Deposit date:2008-10-10
Release date:2009-10-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the Sh3-C domain of Cin85
To be Published
8ISR
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Crystal structure of extended-spectrum class A beta-lactamase, CESS-1 E166Q acylated by cefaclor
Descriptor: (R)-2-((R)-((R)-2-amino-2-phenylacetamido)(carboxy)methyl)-5-chloro-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, 1,2-ETHANEDIOL, Beta-lactamase
Authors:Jeong, B.G, Kim, M.Y, Jeong, C.S, Do, H.W, Lee, J.H, Cha, S.S.
Deposit date:2023-03-21
Release date:2024-05-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Characterization of the extended substrate spectrum of the class A beta-lactamase CESS-1 from Stenotrophomonas sp. and structure-based investigation into its substrate preference.
Int J Antimicrob Agents, 63, 2024

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PDB entries from 2024-11-06

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