PDB: 72372 resultsInfo pagesStatus searchChemie searchBIRD

---

1DZF	RPB5 from S.cerevisiae Descriptor: DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1 Authors: Todone, F, Weinzierl, R.O.J, Brick, P, Onesti, S. Deposit date: 2000-02-25 Release date: 2000-06-09 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal Structure of Rpb5, a Universal Eukaryotic RNA Polymerase Subunit and Transcription Factor Interaction Target Proc.Natl.Acad.Sci.USA, 97, 2000
4M57	Crystal structure of the pentatricopeptide repeat protein PPR10 from maize Descriptor: Chloroplast pentatricopeptide repeat protein 10 Authors: Yin, P, Li, Q, Yan, C, Liu, Y, Yan, N. Deposit date: 2013-08-08 Release date: 2013-10-30 Last modified: 2013-12-18 Method: X-RAY DIFFRACTION (2.86 Å) Cite: Structural basis for the modular recognition of single-stranded RNA by PPR proteins. Nature, 504, 2013
2VON	Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer AUAAUUU Descriptor: 5'-R(*AP*UP*AP*AP*UP*UP*UP)-3', LUPUS LA PROTEIN Authors: Kotik-Kogan, O, Valentine, E.R, Sanfelice, D, Conte, M.R, Curry, S. Deposit date: 2008-02-19 Release date: 2008-05-06 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein. Structure, 16, 2008
7EEI	Structure of Rift Valley fever virus RNA-dependent RNA polymerase Descriptor: Replicase Authors: Wang, X, Hu, C.X. Deposit date: 2021-03-18 Release date: 2021-11-17 Last modified: 2022-03-16 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structure of Rift Valley Fever Virus RNA-Dependent RNA Polymerase. J.Virol., 96, 2022
6USR	Telomerase Reverse Transcriptase ternary complex, TERT:DNA:dGpCpp Descriptor: DNA (5'-D(*GP*GP*TP*CP*AP*GP*GP*TP*CP*AP*GP*GP*TP*CP*A)-3'), DNA/RNA (5'-R(*CP*UP*GP*AP*CP*CP*UP*GP*AP*C)-D(P*CP*T)-R(P*GP*AP*C)-D(P*C)-3'), MAGNESIUM ION, ... Authors: Schaich, M.A, Freudenthal, B.D. Deposit date: 2019-10-28 Release date: 2020-06-17 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.93 Å) Cite: Mechanisms of nucleotide selection by telomerase. Elife, 9, 2020
5UH8	Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt RNA Descriptor: DNA (5'-D(*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ... Authors: Lin, W, Das, K, Feng, Y, Ebright, R.H. Deposit date: 2017-01-11 Release date: 2017-04-12 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (4.176 Å) Cite: Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition. Mol. Cell, 66, 2017
5UH9	Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2nt RNA Descriptor: DNA (5'-D(*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*AP*GP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ... Authors: Lin, W, Das, K, Feng, Y, Ebright, R.H. Deposit date: 2017-01-11 Release date: 2017-04-12 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (4.402 Å) Cite: Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition. Mol. Cell, 66, 2017
5UH5	Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3 nt of RNA Descriptor: DNA (5'-D(*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*AP*GP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ... Authors: Lin, W, Das, K, Feng, Y, Ebright, R.H. Deposit date: 2017-01-10 Release date: 2017-04-12 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.746 Å) Cite: Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition. Mol. Cell, 66, 2017
5UHC	Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3nt RNA in complex with Rifampin Descriptor: DNA (5'-D(*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*AP*GP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ... Authors: Lin, W, Das, K, Feng, Y, Ebright, R.H. Deposit date: 2017-01-11 Release date: 2017-04-12 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (3.796 Å) Cite: Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition. Mol. Cell, 66, 2017
4A2V	Structure of duck RIG-I C-terminal domain (CTD) Descriptor: GLYCEROL, RETINOIC ACID INDUCIBLE PROTEIN I, ZINC ION Authors: Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S. Deposit date: 2011-09-29 Release date: 2011-10-19 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.44 Å) Cite: Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA. Cell(Cambridge,Mass.), 147, 2011
4A2P	Structure of duck RIG-I helicase domain Descriptor: RETINOIC ACID INDUCIBLE PROTEIN I Authors: Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S. Deposit date: 2011-09-28 Release date: 2011-10-19 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA. Cell(Cambridge,Mass.), 147, 2011
4ALP	The Lin28b Cold shock domain in complex with hexauridine Descriptor: GLYCEROL, HEXA URIDINE, LIN28 ISOFORM B Authors: Mayr, F, Schuetz, A, Doege, N, Heinemann, U. Deposit date: 2012-03-05 Release date: 2012-09-05 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.48 Å) Cite: The Lin28 Cold-Shock Domain Remodels Pre-Let-7 Microrna. Nucleic Acids Res., 40, 2012
3C0K	Crystal Structure of a ribosomal RNA methyltranferase Descriptor: UPF0064 protein yccW Authors: Subramanian, S, Jayaraman, S, Bujnicki, J. Deposit date: 2008-01-21 Release date: 2008-11-04 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of the Escherichia coli 23S rRNA:m5C methyltransferase RlmI (YccW) reveals evolutionary links between RNA modification enzymes J.Mol.Biol., 383, 2008
1QHK	N-TERMINAL DOMAIN OF SACCHAROMYCES CEREVISIAE RNASE HI REVEALS A FOLD WITH A RESEMBLANCE TO THE N-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN L9 Descriptor: PROTEIN (RIBONUCLEASE HI) Authors: Evans, S.P, Bycroft, M. Deposit date: 1999-05-17 Release date: 1999-08-31 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: NMR structure of the N-terminal domain of Saccharomyces cerevisiae RNase HI reveals a fold with a strong resemblance to the N-terminal domain of ribosomal protein L9. J.Mol.Biol., 291, 1999
6JDQ	Crystal structure of Nme1Cas9 in complex with sgRNA Descriptor: CRISPR-associated endonuclease Cas9, sgRNA Authors: Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y. Deposit date: 2019-02-02 Release date: 2019-11-06 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States. Mol.Cell, 76, 2019
1H2D	Ebola virus matrix protein VP40 N-terminal domain in complex with RNA (Low-resolution VP40[31-212] variant). Descriptor: 5'-R(*UP*GP*AP)-3', CHLORIDE ION, MATRIX PROTEIN VP40 Authors: Gomis-Ruth, F.X, Dessen, A, Bracher, A, Klenk, H.D, Weissenhorn, W. Deposit date: 2002-08-06 Release date: 2003-04-10 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.6 Å) Cite: The Matrix Protein Vp40 from Ebola Virus Octamerizes Into Pore-Like Structures with Specific RNA Binding Properties Structure, 11, 2003
2OSQ	NMR Structure of RRM-1 of Yeast NPL3 Protein Descriptor: Nucleolar protein 3 Authors: Deka, P, Bucheli, M, Skrisovska, L, Allain, F.H, Moore, C, Buratowski, S, Varani, G. Deposit date: 2007-02-06 Release date: 2007-12-18 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure of the yeast SR protein Npl3 and Interaction with mRNA 3'-end processing signals. J.Mol.Biol., 375, 2008
6DVC	Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L) containing 5nt RNA with 6nt spacer Descriptor: DNA (5'-D(*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*G)-3'), DNA (5'-D(P*CP*GP*TP*GP*TP*CP*AP*GP*TP*AP*GP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*C)-3'), DNA-directed RNA polymerase subunit alpha, ... Authors: Lin, W, Das, K, Feng, Y, Ebright, R.H. Deposit date: 2018-06-23 Release date: 2019-02-20 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Structural basis of ECF-sigma-factor-dependent transcription initiation. Nat Commun, 10, 2019
5ZX3	Mycobacterium tuberculosis RNA polymerase holoenzyme with ECF sigma factor sigma H Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Li, L, Zhang, Y. Deposit date: 2018-05-17 Release date: 2019-03-20 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.751 Å) Cite: Structural basis for transcription initiation by bacterial ECF sigma factors. Nat Commun, 10, 2019
4A2Q	Structure of duck RIG-I tandem CARDs and helicase domain Descriptor: RETINOIC ACID INDUCIBLE PROTEIN I Authors: Kowalinski, E, Lunardi, T, McCarthy, A.A, Cusack, S. Deposit date: 2011-09-28 Release date: 2011-10-19 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA. Cell(Cambridge,Mass.), 147, 2011
2VOP	Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer AUUUU Descriptor: 5'-R(*AP*UP*UP*UP*UP)-3', LUPUS LA PROTEIN, SULFATE ION Authors: Kotik-Kogan, O, Valentine, E.R, Sanfelice, D, Conte, M.R, Curry, S. Deposit date: 2008-02-19 Release date: 2008-05-06 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein. Structure, 16, 2008
2XNZ	xpt-pbuX C74U Riboswitch from B. subtilis bound to acetoguanamine identified by virtual screening Descriptor: 6-METHYL-1,3,5-TRIAZINE-2,4-DIAMINE, ACETATE ION, COBALT HEXAMMINE(III), ... Authors: Daldrop, P, Reyes, F.E, Robinson, D.A, Hammond, C.M, Lilley, D.M.J, Batey, R.T, Brenk, R. Deposit date: 2010-08-06 Release date: 2011-04-06 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.59 Å) Cite: Novel ligands for a purine riboswitch discovered by RNA-ligand docking. Chem. Biol., 18, 2011
3KMQ	G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, tetragonal structure Descriptor: 3D polymerase, RNA (5'-R(*GP*GP*CP*CP*C)-3'), RNA (5'-R(P*GP*GP*GP*CP*C)-3') Authors: Ferrer-Orta, C, Verdaguer, N, Perez-Luque, R. Deposit date: 2009-11-11 Release date: 2010-07-07 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.11 Å) Cite: Structure of foot-and-mouth disease virus mutant polymerases with reduced sensitivity to ribavirin J.Virol., 84, 2010
3KMS	G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA trigonal structure Descriptor: 3D polymerase, MAGNESIUM ION, RNA (5'-R(*AP*UP*GP*GP*GP*CP*C)-3'), ... Authors: Ferrer-Orta, C, Verdaguer, N, Perez-Luque, R. Deposit date: 2009-11-11 Release date: 2010-07-07 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure of foot-and-mouth disease virus mutant polymerases with reduced sensitivity to ribavirin J.Virol., 84, 2010
4BS2	NMR structure of human TDP-43 tandem RRMs in complex with UG-rich RNA Descriptor: 5'-R(*GP*UP*GP*UP*GP*AP*AP*UP*GP*AP*AP*UP)-3', TAR DNA-BINDING PROTEIN 43 Authors: Lukavsky, P.J, Daujotyte, D, Tollervey, J.R, Ule, J, Stuani, C, Buratti, E, Baralle, F.E, Damberger, F.F, Allain, F.H.T. Deposit date: 2013-06-06 Release date: 2013-11-13 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Molecular Basis of Ug-Rich RNA Recognition by the Human Splicing Factor Tdp-43 Nat.Struct.Mol.Biol., 20, 2013

<433434435436437438439440441442443444445446447448>