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7KVI
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BU of 7kvi by Molmil
Human CYP3A4 bound to an inhibitor
Descriptor: Cytochrome P450 3A4, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Sevrioukova, I.
Deposit date:2020-11-28
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Rational Design of CYP3A4 Inhibitors: A One-Atom Linker Elongation in Ritonavir-Like Compounds Leads to a Marked Improvement in the Binding Strength.
Int J Mol Sci, 22, 2021
7KVJ
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BU of 7kvj by Molmil
Human CYP3A4 bound to an inhibitor
Descriptor: Cytochrome P450 3A4, PROTOPORPHYRIN IX CONTAINING FE, tert-butyl [(2S)-1-{[(2S)-1-oxo-3-phenyl-1-{[3-(pyridin-3-yl)propyl]amino}propan-2-yl]sulfanyl}-3-phenylpropan-2-yl]carbamate
Authors:Sevrioukova, I.
Deposit date:2020-11-28
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Rational Design of CYP3A4 Inhibitors: A One-Atom Linker Elongation in Ritonavir-Like Compounds Leads to a Marked Improvement in the Binding Strength.
Int J Mol Sci, 22, 2021
7KX9
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BU of 7kx9 by Molmil
Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA-target complex
Descriptor: MAGNESIUM ION, Piwi-A, RNA (5'-R(P*UP*CP*UP*CP*UP*UP*GP*AP*GP*UP*UP*GP*GP*AP*CP*AP*AP*AP*UP*GP*GP*CP*AP*(OMG))-3'), ...
Authors:Anzelon, T.A, Chowdhury, S, Lander, G.C, MacRae, I.J.
Deposit date:2020-12-03
Release date:2021-07-14
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis for piRNA targeting.
Nature, 597, 2021
7KX7
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BU of 7kx7 by Molmil
Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA complex
Descriptor: MAGNESIUM ION, Piwi-A, RNA (5'-R(P*UP*CP*UP*CP*AP*GP*(OMC))-3')
Authors:Anzelon, T.A, Chowdhury, S, Lander, G.C, MacRae, I.J.
Deposit date:2020-12-03
Release date:2021-07-14
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for piRNA targeting.
Nature, 597, 2021
7KRG
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BU of 7krg by Molmil
Crystal Structure of Mannitol Dehydrogenase (ChMDH) from Cladosporium herbarum in complex with NADP+ and Na
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-dependent mannitol dehydrogenase, SODIUM ION
Authors:Lee, S.G, Jez, J.M.
Deposit date:2020-11-19
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.03797364 Å)
Cite:Biochemical and clinical studies of putative allergens to assess what distinguishes them from other non-allergenic proteins in the same family.
Transgenic Res, 31, 2022
7LUP
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BU of 7lup by Molmil
Human TRiC/CCT complex with reovirus outer capsid protein sigma-3
Descriptor: Outer capsid protein sigma-3, T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, ...
Authors:Knowlton, J.J, Gestaut, D, Ma, B, Taylor, G, Seven, A.B, Leitner, A, Wilson, G.J, Shanker, S, Yates, N.A, Prasad, B.V.V, Aebersold, R, Chiu, W, Frydman, J, Dermody, T.S.
Deposit date:2021-02-22
Release date:2021-03-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Structural and functional dissection of reovirus capsid folding and assembly by the prefoldin-TRiC/CCT chaperone network.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LUM
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BU of 7lum by Molmil
Human TRiC in ATP/AlFx closed state
Descriptor: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ...
Authors:Knowlton, J.J, Gestaut, D, Ma, B, Taylor, G, Seven, A.B, Leitner, A, Wilson, G.J, Shanker, S, Yates, N.A, Prasad, B.V.V, Aebersold, R, Chiu, W, Frydman, J, Dermody, T.S.
Deposit date:2021-02-22
Release date:2021-03-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural and functional dissection of reovirus capsid folding and assembly by the prefoldin-TRiC/CCT chaperone network.
Proc.Natl.Acad.Sci.USA, 118, 2021
7K01
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BU of 7k01 by Molmil
Structure of TFIIH in TFIIH/Rad4-Rad23-Rad33 DNA opening complex
Descriptor: DNA repair helicase RAD25, DNA repair helicase RAD3, General transcription and DNA repair factor IIH subunit SSL1, ...
Authors:van Eeuwen, T, Min, J.H, Murakami, K.
Deposit date:2020-09-02
Release date:2021-07-28
Last modified:2024-12-25
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of TFIIH/Rad4-Rad23-Rad33 in damaged DNA opening in nucleotide excision repair.
Nat Commun, 12, 2021
7K06
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BU of 7k06 by Molmil
Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, ERI1 exoribonuclease 3, MAGNESIUM ION
Authors:Thapar, R, Arvai, A.S, Tainer, J.A.
Deposit date:2020-09-03
Release date:2021-10-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3'- 5' exoribonucleases
To Be Published
7K07
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BU of 7k07 by Molmil
Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
Descriptor: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, MANGANESE (II) ION
Authors:Thapar, R, Arvai, A.S, Tainer, J.A.
Deposit date:2020-09-03
Release date:2021-10-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3'- 5' exoribonucleases
To Be Published
7K05
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BU of 7k05 by Molmil
Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
Descriptor: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, GLYCEROL, ...
Authors:Thapar, R, Andrew, A.S, Tainer, J.A.
Deposit date:2020-09-03
Release date:2021-10-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3' - 5' exoribonucleases
To Be Published
7KHR
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BU of 7khr by Molmil
Cryo-EM structure of bafilomycin A1-bound intact V-ATPase from bovine brain
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (5R)-2,4-dideoxy-1-C-{(2S,3R,4S)-3-hydroxy-4-[(2R,3S,4E,6E,9R,10S,11R,12E,14Z)-10-hydroxy-3,15-dimethoxy-7,9,11,13-tetramethyl-16-oxo-1-oxacyclohexadeca-4,6,12,14-tetraen-2-yl]pentan-2-yl}-4-methyl-5-propan-2-yl-alpha-D-threo-pentopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, R, Li, X.
Deposit date:2020-10-21
Release date:2021-03-17
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Molecular basis of V-ATPase inhibition by bafilomycin A1.
Nat Commun, 12, 2021
7LQS
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BU of 7lqs by Molmil
Structure of truncated conotoxin CIC
Descriptor: Alpha-conotoxin CIC
Authors:Evans, E.R.J, Daly, N.L.
Deposit date:2021-02-15
Release date:2021-04-21
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Synthesis, Structural and Pharmacological Characterizations of CIC, a Novel alpha-Conotoxin with an Extended N-Terminal Tail.
Mar Drugs, 19, 2021
7LQR
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BU of 7lqr by Molmil
Structure of conotoxin CIC
Descriptor: Alpha-conotoxin CIC
Authors:Evans, E.R.J, Daly, N.L.
Deposit date:2021-02-15
Release date:2021-04-21
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Synthesis, Structural and Pharmacological Characterizations of CIC, a Novel alpha-Conotoxin with an Extended N-Terminal Tail.
Mar Drugs, 19, 2021
7KTR
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BU of 7ktr by Molmil
Cryo-EM structure of the human SAGA coactivator complex (TRRAP, core)
Descriptor: Ataxin-7, INOSITOL HEXAKISPHOSPHATE, Isoform 3 of Transcription factor SPT20 homolog, ...
Authors:Herbst, D.A, Esbin, M.N, Nogales, E.
Deposit date:2020-11-24
Release date:2021-11-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structure of the human SAGA coactivator complex.
Nat.Struct.Mol.Biol., 28, 2021
7KTS
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BU of 7kts by Molmil
Negative stain EM structure of the human SAGA coactivator complex (TRRAP, core, splicing module)
Descriptor: Ataxin-7, Isoform 3 of Transcription factor SPT20 homolog, STAGA complex 65 subunit gamma, ...
Authors:Herbst, D.A, Esbin, M.N, Nogales, E.
Deposit date:2020-11-24
Release date:2021-11-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (19.09 Å)
Cite:Structure of the human SAGA coactivator complex.
Nat.Struct.Mol.Biol., 28, 2021
7LK3
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BU of 7lk3 by Molmil
Crystal structure of untwinned human GABARAPL2
Descriptor: 1,2-ETHANEDIOL, Gamma-aminobutyric acid receptor-associated protein-like 2
Authors:Scicluna, K, Dewson, G, Czabotar, P.E, Birkinshaw, R.W.
Deposit date:2021-02-01
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A new crystal form of GABARAPL2.
Acta Crystallogr.,Sect.F, 77, 2021
7K04
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BU of 7k04 by Molmil
Structure of TFIIH/Rad4-Rad23-Rad33/DNA in DNA opening
Descriptor: CALCIUM ION, DNA repair helicase RAD25, DNA repair helicase RAD3, ...
Authors:van Eeuwen, T, Min, J.H, Murakami, K.
Deposit date:2020-09-03
Release date:2021-07-28
Last modified:2024-12-25
Method:ELECTRON MICROSCOPY (9.25 Å)
Cite:Cryo-EM structure of TFIIH/Rad4-Rad23-Rad33 in damaged DNA opening in nucleotide excision repair.
Nat Commun, 12, 2021
7LUL
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BU of 7lul by Molmil
Structure of the MM2 Erbin PDZ variant in complex with a high-affinity peptide
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Singer, A.U, Teyra, J, McLaughlin, M, Ernst, A, Sicheri, F, Sidhu, S.S.
Deposit date:2021-02-22
Release date:2021-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Comprehensive Assessment of the Relationship Between Site -2 Specificity and Helix alpha 2 in the Erbin PDZ Domain.
J.Mol.Biol., 433, 2021
7LC2
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BU of 7lc2 by Molmil
Crystal Structure of KRAS4b-Q61R (GMPPNP-bound) in complex with the RAS-binding domain (RBD) of SIN1
Descriptor: GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Dharmaiah, S, Simanshu, D.K.
Deposit date:2021-01-09
Release date:2021-07-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:RAS interaction with Sin1 is dispensable for mTORC2 assembly and activity.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LC1
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BU of 7lc1 by Molmil
Crystal Structure of KRAS4b (GMPPNP-bound) in complex with the RBD-PH domains of SIN1
Descriptor: Isoform 2B of GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Dharmaiah, S, Simanshu, D.K.
Deposit date:2021-01-09
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:RAS interaction with Sin1 is dispensable for mTORC2 assembly and activity.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LAD
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BU of 7lad by Molmil
Clobetasol propionate bound to CYP3A5
Descriptor: Clobetasol propionate, Cytochrome P450 3A5, PROTOPORPHYRIN IX CONTAINING FE
Authors:Buchman, C.D, Miller, D, Wang, J, Jayaraman, S, Chen, T.
Deposit date:2021-01-06
Release date:2021-10-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Unraveling the Structural Basis of Selective Inhibition of Human Cytochrome P450 3A5.
J.Am.Chem.Soc., 143, 2021
8P14
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BU of 8p14 by Molmil
USP28 USP domain in complex with Vismodegib
Descriptor: 2-chloranyl-~{N}-(4-chloranyl-3-pyridin-2-yl-phenyl)-4-methylsulfonyl-benzamide, CHLORIDE ION, Ubiquitin carboxyl-terminal hydrolase 28
Authors:Sauer, F, Karal Nair, R, Kisker, C.
Deposit date:2023-05-11
Release date:2024-05-22
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structural basis for the bi-specificity of USP25 and USP28 inhibitors.
Embo Rep., 25, 2024
8P1P
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BU of 8p1p by Molmil
USP28 in complex with AZ1
Descriptor: 2-[[5-bromanyl-2-[[4-fluoranyl-3-(trifluoromethyl)phenyl]methoxy]phenyl]methylamino]ethanol, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Sauer, F, Karal-Nair, R, Kisker, C.
Deposit date:2023-05-12
Release date:2024-05-22
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structural basis for the bi-specificity of USP25 and USP28 inhibitors.
Embo Rep., 25, 2024
8PEW
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BU of 8pew by Molmil
Rho-ATPgS-Psu complex III expanded
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Polarity suppression protein, ...
Authors:Gjorgjevikj, D, Wahl, M.C, Hilal, T, Loll, B.
Deposit date:2023-06-15
Release date:2024-06-26
Last modified:2025-01-22
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:The Psu protein of phage satellite P4 inhibits transcription termination factor rho by forced hyper-oligomerization.
Nat Commun, 16, 2025

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PDB entries from 2025-05-14

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