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7S85
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BU of 7s85 by Molmil
Crystal structure of CDK2 liganded with compound WN316
Descriptor: 1,2-ETHANEDIOL, 2-{[2-(1H-indol-3-yl)ethyl]amino}-5-(trifluoromethoxy)benzoic acid, Cyclin-dependent kinase 2
Authors:Sun, L, Schonbrunn, E.
Deposit date:2021-09-17
Release date:2022-09-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Screening through Lead Optimization of High Affinity, Allosteric Cyclin-Dependent Kinase 2 (CDK2) Inhibitors as Male Contraceptives That Reduce Sperm Counts in Mice.
J.Med.Chem., 66, 2023
7N11
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BU of 7n11 by Molmil
Crystal structure of the M. abscessus LeuRS editing domain in complex with epetraborole-AMP adduct
Descriptor: Leucine--tRNA ligase, SULFATE ION
Authors:Kalthoff, E, Schmeing, M.
Deposit date:2021-05-26
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Efficacy of epetraborole against Mycobacterium abscessus is increased with norvaline.
Plos Pathog., 17, 2021
7PTL
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BU of 7ptl by Molmil
Mature conformer of a 6-helix bundle of RNA with clasp
Descriptor: Chains: B
Authors:McRae, E.K.S, Andersen, E.S.
Deposit date:2021-09-27
Release date:2022-10-05
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structure, folding and flexibility of co-transcriptional RNA origami.
Nat Nanotechnol, 18, 2023
5MQJ
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BU of 5mqj by Molmil
Crystal structure of dCK mutant C3S
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Deoxycytidine kinase, MAGNESIUM ION, ...
Authors:Saez-Ayala, M, Rebuffet, E, Hammam, K, Gros, L, Lopez, S, Hajem, B, Humbert, M, Baudelet, E, Audebert, S, Betzi, S, Lugari, A, Combes, S, Pez, D, Letard, S, Mansfield, C, Moussy, A, de Sepulveda, P, Morelli, X, Dubreuil, P.
Deposit date:2016-12-20
Release date:2017-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Dual protein kinase and nucleoside kinase modulators for rationally designed polypharmacology.
Nat Commun, 8, 2017
5MQW
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BU of 5mqw by Molmil
High-speed fixed-target serial virus crystallography
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Roedig, P, Ginn, H.M, Pakendorf, T, Sutton, G, Harlos, K, Walter, T.S, Meyer, J, Fischer, P, Duman, R, Vartiainen, I, Reime, B, Warmer, M, Brewster, A.S, Young, I.D, Michels-Clark, T, Sauter, N.K, Sikorsky, M, Nelson, S, Damiani, D.S, Alonso-Mori, R, Ren, J, Fry, E.E, David, C, Stuart, D.I, Wagner, A, Meents, A.
Deposit date:2016-12-21
Release date:2017-06-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:High-speed fixed-target serial virus crystallography.
Nat. Methods, 14, 2017
7PTK
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BU of 7ptk by Molmil
Young conformer of a 6-helix bundle of RNA with clasp
Descriptor: RNA
Authors:McRae, E.K.S, Andersen, E.S.
Deposit date:2021-09-27
Release date:2022-10-05
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.18 Å)
Cite:Structure, folding and flexibility of co-transcriptional RNA origami.
Nat Nanotechnol, 18, 2023
5TXN
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BU of 5txn by Molmil
STRUCTURE OF Q151M MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*G)-3'), ...
Authors:Das, K, Martinez, S.M, Arnold, E.
Deposit date:2016-11-17
Release date:2017-04-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural Insights into HIV Reverse Transcriptase Mutations Q151M and Q151M Complex That Confer Multinucleoside Drug Resistance.
Antimicrob. Agents Chemother., 61, 2017
8THD
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BU of 8thd by Molmil
Structure of the Saccharomyces cerevisiae clamp unloader Elg1-RFC bound to PCNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ELG1 isoform 1, MAGNESIUM ION, ...
Authors:Zheng, F, Yao, Y.N, Georgescu, R, O'Donnell, M.E, Li, H.
Deposit date:2023-07-14
Release date:2024-05-22
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Structure of the PCNA unloader Elg1-RFC.
Sci Adv, 10, 2024
8THB
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BU of 8thb by Molmil
Structure of the Saccharomyces cerevisiae PCNA clamp unloader Elg1-RFC complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ELG1 isoform 1, MAGNESIUM ION, ...
Authors:Zheng, F, Yao, Y.N, Georgescu, R, O'Donnell, M.E, Li, H.
Deposit date:2023-07-14
Release date:2024-05-22
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the PCNA unloader Elg1-RFC.
Sci Adv, 10, 2024
1FFN
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BU of 1ffn by Molmil
CRYSTAL STRUCTURE OF MURINE CLASS I H-2DB COMPLEXED WITH PEPTIDE GP33(C9M)
Descriptor: BETA-2 MICROGLOBULIN, BETA CHAIN, H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
Authors:Wang, B, Sharma, A, Maile, R, Saad, M, Collins, E.J, Frelinger, J.A.
Deposit date:2000-07-25
Release date:2002-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Peptidic termini play a significant role in TCR recognition
J.IMMUNOL., 169, 2002
6XSD
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BU of 6xsd by Molmil
Patient-derived B2GPI
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-glycoprotein 1
Authors:Klenotic, P.A, Yu, E.W.Y.
Deposit date:2020-07-15
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:B2-Glycoprotein I and it's role in APS
To Be Published
7PX5
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BU of 7px5 by Molmil
ATAD2 in complex with 1-Methyl-2-quinolone
Descriptor: 1,2-ETHANEDIOL, 1-METHYLQUINOLIN-2(1H)-ONE, ATPase family AAA domain-containing protein 2, ...
Authors:Martin, M.P, Noble, M.E.N.
Deposit date:2021-10-07
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Exiting the tunnel of uncertainty: crystal soak to validated hit.
Acta Crystallogr D Struct Biol, 78, 2022
1F8W
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BU of 1f8w by Molmil
CRYSTAL STRUCTURE OF NADH PEROXIDASE MUTANT: R303M
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADH PEROXIDASE
Authors:Yeh, J.I, Claiborne, A, Hol, W.G.J.
Deposit date:2000-07-05
Release date:2001-02-05
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Analysis of the kinetic and redox properties of the NADH peroxidase R303M mutant: correlation with the crystal structure.
Biochemistry, 39, 2000
5XJO
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BU of 5xjo by Molmil
Plant receptor ERL1-TMM in complex with peptide EPF1
Descriptor: LRR receptor-like serine/threonine-protein kinase ERL1, Protein EPIDERMAL PATTERNING FACTOR 1, Protein TOO MANY MOUTHS
Authors:Chai, J, Lin, G, Zhang, L, Han, Z, Shpak, E.D, Yang, X.
Deposit date:2017-05-03
Release date:2019-01-23
Method:X-RAY DIFFRACTION (2.626 Å)
Cite:A receptor-like protein acts as a specificity switch for the regulation of stomatal development.
Genes Dev., 31, 2017
6RIR
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BU of 6rir by Molmil
Crystal structure of phosphorylated Rab8a in complex with the Rab-binding domain of RILPL2
Descriptor: GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Waschbusch, D, Purlyte, E, Alessi, D.R, Khan, A.R.
Deposit date:2019-04-25
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.767 Å)
Cite:Structural Basis for Rab8a Recruitment of RILPL2 via LRRK2 Phosphorylation of Switch 2.
Structure, 28, 2020
1TF3
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BU of 1tf3 by Molmil
TFIIIA FINGER 1-3 BOUND TO DNA, NMR, 22 STRUCTURES
Descriptor: 5S RNA GENE, TRANSCRIPTION FACTOR IIIA, ZINC ION
Authors:Foster, M.P, Wuttke, D.S, Radhakrishnan, I, Case, D.A, Gottesfeld, J.M, Wright, P.E.
Deposit date:1997-07-01
Release date:1997-09-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Domain packing and dynamics in the DNA complex of the N-terminal zinc fingers of TFIIIA.
Nat.Struct.Biol., 4, 1997
6PE4
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BU of 6pe4 by Molmil
Yeast Vo motor in complex with 1 VopQ molecule
Descriptor: Cation transporter, Uncharacterized protein YPR170W-B, V-type proton ATPase subunit a, ...
Authors:Peng, W, Li, Y, Tomchick, D.R, Orth, K.
Deposit date:2019-06-20
Release date:2020-05-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A distinct inhibitory mechanism of the V-ATPase by Vibrio VopQ revealed by cryo-EM.
Nat.Struct.Mol.Biol., 27, 2020
6X6V
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BU of 6x6v by Molmil
Crystal structure of inactive enzymatic binary toxin component from Clostridium difficile in complex with NADPH
Descriptor: CdtA, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Pozharski, E.
Deposit date:2020-05-29
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of inactive enzymatic binary toxin component from Clostridium difficile in complex with NADPH
To Be Published
6OZ6
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BU of 6oz6 by Molmil
Crystal structure of MraY bound to 3'-hydroxymureidomycin A
Descriptor: (2~{S})-2-[[(2~{S})-1-[[(2~{S},3~{S})-3-[[(2~{S})-2-azanyl-3-(3-hydroxyphenyl)propanoyl]-methyl-amino]-1-[[(~{Z})-[(3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-ylidene]methyl]amino]-1-oxidanylidene-butan-2-yl]amino]-4-methylsulfanyl-1-oxidanylidene-butan-2-yl]carbamoylamino]-3-(3-hydroxyphenyl)propanoic acid, MraYAA nanobody, Phospho-N-acetylmuramoyl-pentapeptide-transferase
Authors:Mashalidis, E.H, Lee, S.Y.
Deposit date:2019-05-15
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Chemical logic of MraY inhibition by antibacterial nucleoside natural products.
Nat Commun, 10, 2019
6XS9
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BU of 6xs9 by Molmil
Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-L1
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 48V-TYR-ILE-LYS-THR-PRO-LEU-GLY-THR-PHE-PRO-ASN-ARG-HIS-GLY, GLYCEROL, ...
Authors:Chen, K.-E, Guo, Q, Collins, B.M.
Deposit date:2020-07-15
Release date:2021-07-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:De novo macrocyclic peptides for inhibiting, stabilizing, and probing the function of the retromer endosomal trafficking complex.
Sci Adv, 7, 2021
6PFZ
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BU of 6pfz by Molmil
Structure of a NAD-Dependent Persulfide Reductase from A. fulgidus
Descriptor: CALCIUM ION, COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Sazinsky, M.H, Shabdar, S, Garcia-Constineiras, A, Crane III, E.J.
Deposit date:2019-06-23
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.10003877 Å)
Cite:Structural and Kinetic Characterization of Hyperthermophilic NADH-Dependent Persulfide Reductase from Archaeoglobus fulgidus .
Archaea, 2021, 2021
8THC
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BU of 8thc by Molmil
Structure of the Saccharomyces cerevisiae clamp unloader Elg1-RFC bound to a cracked PCNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ELG1 isoform 1, MAGNESIUM ION, ...
Authors:Zheng, F, Yao, Y.N, Georgescu, R, O'Donnell, M.E, Li, H.
Deposit date:2023-07-14
Release date:2024-05-22
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structure of the PCNA unloader Elg1-RFC.
Sci Adv, 10, 2024
8TYN
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BU of 8tyn by Molmil
Cryo-EM of the GDP-bound human dynamin polymer assembled on the membrane in the super constricted state (tetramer model)
Descriptor: Dynamin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Jimah, J.R, Canagarajah, B.J, Hinshaw, J.E.
Deposit date:2023-08-25
Release date:2024-06-12
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Cryo-EM structures of membrane-bound dynamin in a post-hydrolysis state primed for membrane fission.
Dev.Cell, 59, 2024
2IT0
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BU of 2it0 by Molmil
Crystal structure of a two-domain IdeR-DNA complex crystal form II
Descriptor: ACETATE ION, Iron-dependent repressor ideR, NICKEL (II) ION, ...
Authors:Wisedchaisri, G, Chou, C.J, Wu, M, Roach, C, Rice, A.E, Holmes, R.K, Beeson, C, Hol, W.G.
Deposit date:2006-10-18
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures, metal activation, and DNA-binding properties of two-domain IdeR from Mycobacterium tuberculosis
Biochemistry, 46, 2007
8TYM
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BU of 8tym by Molmil
Cryo-EM of the GDP-bound human dynamin (full-length) polymer assembled on the membrane in the super constricted state
Descriptor: Dynamin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Jimah, J.R, Canagarajah, B.J, Hinshaw, J.E.
Deposit date:2023-08-25
Release date:2024-06-12
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Cryo-EM structures of membrane-bound dynamin in a post-hydrolysis state primed for membrane fission.
Dev.Cell, 59, 2024

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