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8Y6D
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BU of 8y6d by Molmil
Norovirus GII.10 P domain and 2'-FL (tablet)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GII.10 norovirus P domain in complex with 2'-FL (tablet), ...
Authors:Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
Deposit date:2024-02-02
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Norovirus GII.10 P domain and 2'-FL (tablet)
To Be Published
8Y6C
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BU of 8y6c by Molmil
Norovirus GII.10 P domain and 2'-FL (powder)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GII.10 norovirus P domain in complex with 2'FL (powder), ...
Authors:Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
Deposit date:2024-02-02
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Norovirus GII.10 P domain and 2'-FL (powder)
To Be Published
8Y6B
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BU of 8y6b by Molmil
Structure of human LGI1-ADAM22 complex in space group P212121
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 22, ...
Authors:Liu, H, Xu, F.
Deposit date:2024-02-02
Release date:2024-02-14
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Structure of human LGI1-ADAM22 complex in space group P212121
To Be Published
8Y6A
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BU of 8y6a by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 RBD in complex with human ACE2 and S309 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, L.J, Gu, Y.H, Qi, J.X, Gao, G.F.
Deposit date:2024-02-02
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Spike structures, receptor binding and immune escape of SARS-CoV-2 Omicron recently-circulating BA.2.86.1, JN.1, EG.5, EG.5.1 and HV.1 sub-variants
To Be Published
8Y66
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BU of 8y66 by Molmil
Cryo-EM structure of human urate transporter GLUT9 bound to inhibitor apigenin
Descriptor: 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one, Solute carrier family 2, facilitated glucose transporter member 9
Authors:Pan, X.J, Shen, Z.L, Xu, L, Huang, G.X.Y.
Deposit date:2024-02-01
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Structural basis for urate recognition and apigenin inhibition of human GLUT9.
Nat Commun, 15, 2024
8Y65
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BU of 8y65 by Molmil
Cryo-EM structure of human urate transporter GLUT9 bound to substrate urate
Descriptor: Solute carrier family 2, facilitated glucose transporter member 9, URIC ACID
Authors:Pan, X.J, Shen, Z.L, Xu, L, Huang, G.X.Y.
Deposit date:2024-02-01
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.51 Å)
Cite:Structural basis for urate recognition and apigenin inhibition of human GLUT9.
Nat Commun, 15, 2024
8Y5V
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BU of 8y5v by Molmil
GII.4 Sydney PD and 2'-FL
Descriptor: 1,2-ETHANEDIOL, GII.4 Sydney PD in complex with 2'-FL (powder), alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
Deposit date:2024-02-01
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:GII.4 Sydney PD and 2'-FL
To Be Published
8Y5J
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BU of 8y5j by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1 spike protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Li, L.J, Gu, Y.H, Qi, J.X, Gao, G.F.
Deposit date:2024-01-31
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Spike structures, receptor binding and immune escape of SARS-CoV-2 Omicron recently-circulating BA.2.86.1, JN.1, EG.5, EG.5.1 and HV.1 sub-variants
To Be Published
8Y4Z
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BU of 8y4z by Molmil
Monomeric HERC5 HECT c-lobe structure in solution
Descriptor: E3 ISG15--protein ligase HERC5
Authors:Dag, C, Lambert, M, Kahraman, K, Lohn, F, Lee, W, Gocenler, O, Guntert, P, Dotsch, V.
Deposit date:2024-01-31
Release date:2024-02-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Monomeric HERC5 HECT c-lobe structure in solution
To Be Published
8Y4U
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BU of 8y4u by Molmil
Crystal structure of a His1 from oryza sativa
Descriptor: FE (III) ION, Fe(II)/2-oxoglutarate-dependent oxygenase
Authors:Wang, N, Ma, J.M, Shibing, H, Beibei, Y, He, Z, Dandan, L.
Deposit date:2024-01-30
Release date:2024-02-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of HPPD inhibitor sensitive protein from Oryza sativa.
Biochem.Biophys.Res.Commun., 704, 2024
8Y4J
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BU of 8y4j by Molmil
Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to D-KDP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-2-keto-3-deoxypentonate, DI(HYDROXYETHYL)ETHER, ...
Authors:Akagashi, M, Watanabe, S.
Deposit date:2024-01-30
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8Y4B
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BU of 8y4b by Molmil
Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to L-2,4-DKDF and NADH
Descriptor: L-2,4-diketo-3-deoxyfuconate, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SDR family oxidoreductase
Authors:Akagashi, M, Watanabe, S.
Deposit date:2024-01-30
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8Y46
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BU of 8y46 by Molmil
Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to L-KDF or L-2,4-DKDF
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, L-2,4-diketo-3-deoxyfuconate, ...
Authors:Akagashi, M, Watanabe, S.
Deposit date:2024-01-30
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8Y3X
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BU of 8y3x by Molmil
Cell divisome sPG hydrolysis machinery FtsEX-EnvC
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division ATP-binding protein FtsE, Cell division protein FtsX, ...
Authors:Zhang, Z, Dong, H, Chen, Y.
Deposit date:2024-01-29
Release date:2024-05-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structure and activity of the septal peptidoglycan hydrolysis machinery crucial for bacterial cell division.
Plos Biol., 22, 2024
8Y33
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BU of 8y33 by Molmil
A near-infrared fluorescent protein of de novo backbone design
Descriptor: 3-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, near-infrared fluorescent protein
Authors:Hu, X, Xu, Y.
Deposit date:2024-01-28
Release date:2024-02-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Using Protein Design and Directed Evolution to Monomerize a Bright Near-Infrared Fluorescent Protein.
Acs Synth Biol, 13, 2024
8Y2S
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BU of 8y2s by Molmil
P-hydroxybenzoate hydroxylase complexed with 4-hydroxy-3-methylbenzoic acid
Descriptor: 3-methyl-4-oxidanyl-benzoic acid, 4-hydroxybenzoate 3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K.
Deposit date:2024-01-27
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional Enhancement of Flavin-Containing Monooxygenase through Machine Learning Methodology
Acs Catalysis, 14, 2024
8Y2H
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BU of 8y2h by Molmil
GK tetramer of AtP5CS1 filament with adjacent hooks, reaction state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Delta-1-pyrroline-5-carboxylate synthase A
Authors:Zhang, T, Guo, C.J, Liu, J.L.
Deposit date:2024-01-26
Release date:2024-06-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Dynamic Arabidopsis P5CS filament facilitates substrate channelling.
Nat.Plants, 10, 2024
8Y22
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BU of 8y22 by Molmil
FGFR1 kinase domain with a covalent inhibitor 9g
Descriptor: Fibroblast growth factor receptor 1, SULFATE ION, ~{N}-[4-[[4-azanyl-3-(7-methoxy-5-methyl-1-benzothiophen-2-yl)pyrazolo[3,4-d]pyrimidin-1-yl]methyl]phenyl]propanamide
Authors:Chen, X.J, Chen, Y.H.
Deposit date:2024-01-25
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.792 Å)
Cite:Design, synthesis and biological evaluation of 5-amino-1H-pyrazole-4-carboxamide derivatives as pan-FGFR covalent inhibitors.
Eur.J.Med.Chem., 275, 2024
8Y1R
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BU of 8y1r by Molmil
in situ room temperature Laue crystallography
Descriptor: Lysozyme C
Authors:Wang, Z.J, Wang, S.S, Pan, Q.Y, Yu, L, Su, Z.H, Yang, T.Y, Wang, Y.Z, Zhang, W.Z, Hao, Q, Gao, X.Y.
Deposit date:2024-01-25
Release date:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:BL03HB: Laue crystallography beamline at SSRF
To Be Published
8Y1M
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BU of 8y1m by Molmil
Xylanase R from Bacillus sp. TAR-1 complexed with xylobiose.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ...
Authors:Nakamura, T, Kuwata, K, Takita, T, Mizutani, K, Mikami, B, Nakamura, S, Yasukawa, K.
Deposit date:2024-01-25
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Activity-stability trade-off observed in variants at position 315 of the GH10 xylanase XynR.
Sci Rep, 14, 2024
8Y1J
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BU of 8y1j by Molmil
Structure of the pyridoxal 5'-phosphate-dependent (PLP) threonine deaminase ilvA1 from Pseudomonas aeruginosa PAO1
Descriptor: 2-KETOBUTYRIC ACID, L-threonine dehydratase
Authors:Jia, H, Bartlam, M.
Deposit date:2024-01-24
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and function of the pyridoxal 5'-phosphate-dependent (PLP) threonine deaminase IlvA1 from Pseudomonas aeruginosa PAO1.
Biochem.Biophys.Res.Commun., 704, 2024
8Y1H
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BU of 8y1h by Molmil
The 2up formation of the HKU1-B S protein in the apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Xia, L.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2024-01-24
Release date:2024-05-01
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structural basis for the recognition of HCoV-HKU1 by human TMPRSS2.
Cell Res., 34, 2024
8Y1G
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BU of 8y1g by Molmil
The 1up conformation of the HKU1-B S protein in the apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Xia, L.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2024-01-24
Release date:2024-05-01
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Structural basis for the recognition of HCoV-HKU1 by human TMPRSS2.
Cell Res., 34, 2024
8Y1F
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BU of 8y1f by Molmil
The closed conformation of the HKU1-B S protein in the apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Xia, L.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2024-01-24
Release date:2024-05-01
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for the recognition of HCoV-HKU1 by human TMPRSS2.
Cell Res., 34, 2024
8Y1E
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BU of 8y1e by Molmil
3up-TM conformation of HKU1-B S protein after incubation of the receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Xia, L.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2024-01-24
Release date:2024-05-01
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for the recognition of HCoV-HKU1 by human TMPRSS2.
Cell Res., 34, 2024

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PDB entries from 2024-07-17

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