PDB: 222415 resultsInfo pagesStatus searchChemie searchBIRD

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4N7M	Tailoring Small Molecules for an Allosteric Site on Procaspase-6 Descriptor: 3-(pyrrolidin-1-yl)isoquinolin-1(2H)-one, Caspase-6, PHOSPHATE ION Authors: Murray, J.M, Steffek, M. Deposit date: 2013-10-15 Release date: 2013-12-18 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.125 Å) Cite: Tailoring small molecules for an allosteric site on procaspase-6. Chemmedchem, 9, 2014
4N82	X-ray crystal structure of Streptococcus sanguinis NrdIox Descriptor: FLAVIN MONONUCLEOTIDE, Ribonucleotide reductase, SULFATE ION Authors: Boal, A.K, Rosenzweig, A.C. Deposit date: 2013-10-16 Release date: 2014-01-08 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.88 Å) Cite: Streptococcus sanguinis Class Ib Ribonucleotide Reductase: HIGH ACTIVITY WITH BOTH IRON AND MANGANESE COFACTORS AND STRUCTURAL INSIGHTS. J.Biol.Chem., 289, 2014
4MWT	Crystal structure of human PPCA (trigonal crystal form 2) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lysosomal protective protein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose Authors: Kolli, N, Garman, S.C. Deposit date: 2013-09-25 Release date: 2014-03-12 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (3.85 Å) Cite: Proteolytic activation of human cathepsin A. J.Biol.Chem., 289, 2014
4MUM	Crystal structure of mitochondrial 5'(3')-deoxy ribonucleotidase alternative spliced variant Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... Authors: Pachl, P, Rezacova, P. Deposit date: 2013-09-22 Release date: 2014-02-26 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.271 Å) Cite: Kinetic and structural characterization of an alternatively spliced variant of human mitochondrial 5'(3')-deoxyribonucleotidase. J Enzyme Inhib Med Chem, 30, 2015
4MY4	Crystal structure of phosphoglycerate mutase from Staphylococcus aureus. Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, MANGANESE (II) ION Authors: Roychowdhury, A, Kundu, A, Gujar, A, Bose, M, Das, A.K. Deposit date: 2013-09-27 Release date: 2013-10-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2 Å) Cite: Complete catalytic cycle of cofactor-independent phosphoglycerate mutase involves a spring-loaded mechanism Febs J., 282, 2015
4N3S	Crystal structure of eukaryotic translation initiation factor eIF5B (399-852) from Saccharomyces cerevisiae, apo form Descriptor: 1,2-ETHANEDIOL, Eukaryotic translation initiation factor 5B, GLYCEROL Authors: Kuhle, B, Ficner, R. Deposit date: 2013-10-07 Release date: 2014-07-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.832 Å) Cite: eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining. Embo J., 33, 2014
4N4G	Crystal structure of the Bromo-PWWP of the mouse zinc finger MYND-type containing 11 isoform alpha Descriptor: PHOSPHATE ION, ZINC ION, Zinc finger MYND domain-containing protein 11 Authors: Li, Y, Ren, Y, Li, H. Deposit date: 2013-10-08 Release date: 2014-03-05 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.947 Å) Cite: ZMYND11 links histone H3.3K36me3 to transcription elongation and tumour suppression Nature, 508, 2014
4NGF	Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 17-mer siRNA having 5'-p and UU-3' ends (3.1 Angstrom resolution) Descriptor: 5'-R(P*UP*CP*GP*AP*AP*GP*GP*UP*CP*CP*UP*UP*CP*GP*UP*UP*U)-3', Endoribonuclease Dicer Authors: Simanshu, D.K, Tian, Y, Patel, D.J. Deposit date: 2013-11-01 Release date: 2014-03-05 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.101 Å) Cite: A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer. Mol.Cell, 53, 2014
4NIN	DSVISLS segment 101-107 from Human Superoxide Dismutase Descriptor: DSVISLS segment from Superoxide dismutase [Cu-Zn], ZINC ION Authors: Sievers, S.A, Sawaya, M.R, Eisenberg, D. Deposit date: 2013-11-06 Release date: 2013-12-04 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.402 Å) Cite: Aggregation-triggering segments of SOD1 fibril formation support a common pathway for familial and sporadic ALS. Proc.Natl.Acad.Sci.USA, 111, 2014
4NIY	Crystal structure of trypsiligase (K60E/N143H/Y151H/D189K trypsin) complexed to YRH-ecotin (M84Y/M85R/A86H ecotin) Descriptor: CALCIUM ION, Cationic trypsin, Ecotin, ... Authors: Schoepfel, M, Parthier, C, Stubbs, M.T. Deposit date: 2013-11-08 Release date: 2014-02-19 Last modified: 2014-03-19 Method: X-RAY DIFFRACTION (2.84 Å) Cite: N-terminal protein modification by substrate-activated reverse proteolysis. Angew.Chem.Int.Ed.Engl., 53, 2014
4NQ5	Bacillus cereus Zn-dependent metallo-beta-lactamase at pH 7 complexed with compound CS319 Descriptor: (3R,5R,7aS)-5-(sulfanylmethyl)tetrahydro[1,3]thiazolo[4,3-b][1,3]thiazole-3-carboxylic acid, Beta-lactamase 2, POTASSIUM ION, ... Authors: Gonzalez, J.M, Gonzalez, M.M, Vila, A.J. Deposit date: 2013-11-23 Release date: 2014-11-26 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.29 Å) Cite: Inhibition of metallo-lactamases with bicyclic compounds TO BE PUBLISHED
4NR6	Crystal structure of the bromodomain of human CREBBP in complex with an oxazepin ligand Descriptor: 1-[7-(3,4-dimethoxyphenyl)-9-{[(3R)-1-methylpiperidin-3-yl]methoxy}-2,3-dihydro-1,4-benzoxazepin-4(5H)-yl]propan-1-one, CREB-binding protein Authors: Filippakopoulos, P, Picaud, S, Felletar, I, Hay, D, Fedorov, O, Martin, S, Chaikuad, A, von Delft, F, Brennan, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC) Deposit date: 2013-11-26 Release date: 2013-12-18 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.66 Å) Cite: Crystal structure of the bromodomain of human CREBBP in complex with an oxazepin ligand To be Published
4NRI	Crystal Structure of a human Mms2/Ubc13 A122G mutant Descriptor: GLYCEROL, Ubiquitin-conjugating enzyme E2 N, Ubiquitin-conjugating enzyme E2 variant 2 Authors: Hodge, C.D, Edwards, R.A, Glover, J.N.M. Deposit date: 2013-11-26 Release date: 2014-12-10 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Stochastic gate dynamics regulate the catalytic activity of ubiquitination enzymes. J.Am.Chem.Soc., 136, 2014
4NTF	Mus Musculus LTC4 synthase in S-hexyl-GSH complex form Descriptor: Leukotriene C4 synthase, NICKEL (II) ION, PALMITIC ACID, ... Authors: Niegowski, D, Rinaldo-Matthis, A, Haeggstrom, J.Z. Deposit date: 2013-12-02 Release date: 2015-01-14 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.65 Å) Cite: To be published To be Published
4NVK	Predicting protein conformational response in prospective ligand discovery. Descriptor: Cytochrome c peroxidase, N~2~,N~2~-diethylquinazoline-2,4-diamine, PHOSPHATE ION, ... Authors: Fischer, M, Fraser, J.S. Deposit date: 2013-12-05 Release date: 2013-12-25 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.56 Å) Cite: Incorporation of protein flexibility and conformational energy penalties in docking screens to improve ligand discovery. Nat Chem, 6, 2014
4NWQ	Computationally Designed Two-Component Self-Assembling Tetrahedral Cage, T33-21, Crystallized in Space Group F4132 Descriptor: Putative uncharacterized protein PH0671, SULFATE ION, Uncharacterized protein Authors: McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O. Deposit date: 2013-12-06 Release date: 2014-05-28 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Accurate design of co-assembling multi-component protein nanomaterials. Nature, 510, 2014
4NGT	Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Tykvart, J, Pachl, P. Deposit date: 2013-11-02 Release date: 2014-06-18 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.31 Å) Cite: Rational design of urea-based glutamate carboxypeptidase II (GCPII) inhibitors as versatile tools for specific drug targeting and delivery. Bioorg.Med.Chem., 22, 2014
4NEX	Structure of the N-acetyltransferase domain of X. fastidiosa NAGS/K Descriptor: Acetylglutamate kinase, N-ACETYL-L-GLUTAMATE, SULFATE ION Authors: Zhao, G, Jin, Z, Allewell, N.M, Tuchman, M, Shi, D. Deposit date: 2013-10-30 Release date: 2014-11-12 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.6955 Å) Cite: Structures of the N-acetyltransferase domain of Xylella fastidiosaN-acetyl-L-glutamate synthase/kinase with and without a His tag bound to N-acetyl-L-glutamate. Acta Crystallogr F Struct Biol Commun, 71, 2015
4NIO	GVTGIAQ segment 147-153 from Human Superoxide Dismutase with I149T mutation associated with a familial form of amyotrophic lateral sclerosis Descriptor: GVTGIAQ segment from Superoxide dismutase [Cu-Zn] Authors: Sievers, S.A, Sawaya, M.R, Eisenberg, D, Ivanova, M.I. Deposit date: 2013-11-06 Release date: 2013-12-04 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Aggregation-triggering segments of SOD1 fibril formation support a common pathway for familial and sporadic ALS. Proc.Natl.Acad.Sci.USA, 111, 2014
4NGP	Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Tykvart, J, Pachl, P. Deposit date: 2013-11-02 Release date: 2014-06-18 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Rational design of urea-based glutamate carboxypeptidase II (GCPII) inhibitors as versatile tools for specific drug targeting and delivery. Bioorg.Med.Chem., 22, 2014
4NHD	Crystal structure of beta-ketoacyl-ACP synthase III (FabH) from Vibrio Cholerae in complex with Coenzyme A Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1, CALCIUM ION, COENZYME A, ... Authors: Hou, J, Zheng, H, Langner, K, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2013-11-04 Release date: 2013-12-25 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Crystal structure of beta-ketoacyl-ACP synthase III (FabH) from Vibrio Cholerae in complex with Coenzyme A To be Published
4NKL	Crystal structure of Staphylococcal nuclease variant Delta+PHS V66A/I92Q at cryogenic temperature Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease Authors: Caro, J.A, Sorenson, J.L, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B. Deposit date: 2013-11-12 Release date: 2013-11-20 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Pressure effects in proteins To be Published
4NMZ	Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease Authors: Caro, J.A, Sorenson, J.L, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B. Deposit date: 2013-11-15 Release date: 2013-12-11 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Cavities in proteins To be Published
4NNG	Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide Descriptor: 30S ribosomal protein S1 Authors: Yang, J, Liu, Y, Cai, Q, Lin, D. Deposit date: 2013-11-18 Release date: 2014-12-24 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide. Mol.Microbiol., 95, 2015
4NRD	Crystal structure of a putative GDSL-like lipase (BACOVA_04955) from Bacteroides ovatus ATCC 8483 at 2.10 A resolution Descriptor: 1,2-ETHANEDIOL, Uncharacterized protein Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2013-11-26 Release date: 2013-12-25 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of a hypothetical protein (BACOVA_04955) from Bacteroides ovatus ATCC 8483 at 2.10 A resolution To be published

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