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5CY8
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BU of 5cy8 by Molmil
Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryze, in complex with fragment 244
Descriptor: (3R)-2,3-dihydro[1,3]thiazolo[3,2-a]benzimidazol-3-ol, ACETATE ION, CADMIUM ION, ...
Authors:Ngo, H.P.T, Kang, L.W.
Deposit date:2015-07-30
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryze, in complex with fragment 244
To Be Published
5CV1
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BU of 5cv1 by Molmil
C. elegans PGL-1 Dimerization Domain
Descriptor: P granule abnormality protein 1
Authors:Aoki, S.T, Bingman, C.A, Wickens, M, Kimble, J.E.
Deposit date:2015-07-25
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.599 Å)
Cite:PGL germ granule assembly protein is a base-specific, single-stranded RNase.
Proc.Natl.Acad.Sci.USA, 113, 2016
2AYW
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BU of 2ayw by Molmil
Crystal Structure of the complex formed between trypsin and a designed synthetic highly potent inhibitor in the presence of benzamidine at 0.97 A resolution
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-{2-[(4-carbamimidoylphenyl)carbamoyl]-6-methoxypyridin-3-yl}-5-{[(2S)-1-hydroxy-3,3-dimethylbutan-2-yl]carbamoyl}benzoic acid, BENZAMIDINE, ...
Authors:Sherawat, M, Kaur, P, Perbandt, M, Betzel, C, Slusarchyk, W.A, Bisacchi, G.S, Chang, C, Jacobson, B.L, Einspahr, H.M, Singh, T.P.
Deposit date:2005-09-09
Release date:2006-01-17
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Structure of the complex of trypsin with a highly potent synthetic inhibitor at 0.97 A resolution.
Acta Crystallogr.,Sect.D, 63, 2007
4Z23
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BU of 4z23 by Molmil
BspA_C_WT
Descriptor: 1,2-ETHANEDIOL, Cell wall surface anchor protein
Authors:Race, P, Rego, S.
Deposit date:2015-03-28
Release date:2016-06-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:BspA_C_WT
To Be Published
5T9W
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BU of 5t9w by Molmil
Discovery of a Potent Cyclophilin Inhibitor (Compound 5) based on Structural Simplification of Sanglifehrin A
Descriptor: 3-[(3-hydroxyphenyl)methyl]-6-(propan-2-yl)-19-oxa-1,4,7,25-tetraazabicyclo[19.3.1]pentacosa-13,15-diene-2,5,8,20-tetrone, Peptidyl-prolyl cis-trans isomerase A
Authors:Appleby, T.C, Steadman, V, Pettit, P, Schmitz, U, Mackman, R.L, Schultz, B.
Deposit date:2016-09-09
Release date:2017-01-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Potent Cyclophilin Inhibitors Based on the Structural Simplification of Sanglifehrin A.
J. Med. Chem., 60, 2017
1AF4
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BU of 1af4 by Molmil
CRYSTAL STRUCTURE OF SUBTILISIN CARLSBERG IN ANHYDROUS DIOXANE
Descriptor: 1,4-DIETHYLENE DIOXIDE, CALCIUM ION, SUBTILISIN CARLSBERG
Authors:Schmitke, J.L, Stern, L.J, Klibanov, A.M.
Deposit date:1997-03-21
Release date:1997-06-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of subtilisin Carlsberg in anhydrous dioxane and its comparison with those in water and acetonitrile.
Proc.Natl.Acad.Sci.USA, 94, 1997
6L71
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BU of 6l71 by Molmil
Sirtuin 2 demyristoylation native intermediate I & II mixture
Descriptor: NAD-dependent protein deacetylase sirtuin-2, NICOTINAMIDE, PRO-ARG-LYS-GLN-LEU-ALA, ...
Authors:Chen, L.F.
Deposit date:2019-10-30
Release date:2021-03-31
Last modified:2025-09-17
Method:X-RAY DIFFRACTION (2.109 Å)
Cite:Sirtuin 2 protein with H3K18 myristoylated peptide
To Be Published
4RYX
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BU of 4ryx by Molmil
Crystal structure of RPE65 in complex with emixustat and palmitate, P6522 crystal form
Descriptor: (1R)-3-amino-1-[3-(cyclohexylmethoxy)phenyl]propan-1-ol, (4S)-2-METHYL-2,4-PENTANEDIOL, FE (II) ION, ...
Authors:Kiser, P.D, Palczewski, K.
Deposit date:2014-12-17
Release date:2015-05-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular pharmacodynamics of emixustat in protection against retinal degeneration.
J.Clin.Invest., 125, 2015
2VOT
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BU of 2vot by Molmil
Structural and biochemical evidence for a boat-like transition state in beta-mannosidases
Descriptor: (5R,6R,7S,8R)-6,7,8-trihydroxy-5-(hydroxymethyl)-2-[(phenylamino)methyl]-5,6,7,8-tetrahydro-1H-imidazo[1,2-a]pyridin-4-ium, 1,2-ETHANEDIOL, BETA-MANNOSIDASE, ...
Authors:Tailford, L.N, Offen, W.A, Smith, N, Dumon, C, Moreland, C, Gratien, J, Heck, M.-P, Stick, R.V, Bleriot, Y, Vasella, A, Gilbert, H.J, Davies, G.J.
Deposit date:2008-02-20
Release date:2008-04-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and Biochemical Evidence for a Boat-Like Transition State in Beta-Mannosidases.
Nat.Chem.Biol., 4, 2008
5TLX
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BU of 5tlx by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with 3,4-bis(4-hydroxyphenyl)thiophene 1,1-dioxide
Descriptor: 3,4-bis(4-hydroxyphenyl)-2,5-dihydro-1H-1lambda~6~-thiophene-1,1-dione, 3-methyl-6-phenyl-3H-imidazo[4,5-b]pyridin-2-amine, Estrogen receptor, ...
Authors:Nwachukwu, J.C, Erumbi, R, Srinivasan, S, Bruno, N.E, Nowak, J, Izard, T, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2016-10-12
Release date:2017-01-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
5TBC
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BU of 5tbc by Molmil
PRECATALYTIC TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH GAPPED DNA SUBSTRATE, INCORPORATED (-)3TC-MP AND AN ANOTHER INCOMING (-)3TC-TP NUCLEOTIDE.
Descriptor: 10- MER PRIMER, 16- MER TEMPLATE, 5-MER PHOSPHORYLATED DOWNSTREAM PRIMER, ...
Authors:Vyas, R, Suo, Z.
Deposit date:2016-09-11
Release date:2017-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Insights into the Post-Chemistry Steps of Nucleotide Incorporation Catalyzed by a DNA Polymerase.
J. Am. Chem. Soc., 139, 2017
3RGX
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BU of 3rgx by Molmil
Structural insight into brassinosteroid perception by BRI1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chai, J, Han, Z, She, J, Wang, J, Cheng, W, Wang, J.
Deposit date:2011-04-11
Release date:2011-06-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural insight into brassinosteroid perception by BRI1.
Nature, 474, 2011
5W8V
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BU of 5w8v by Molmil
HUMAN HGPRT in complex with [(2-[(guanin-9-yl)methyl]propane-1,3-diyl)bis(oxy)]bis(methylene)diphosphonic acid
Descriptor: Hypoxanthine-guanine phosphoribosyltransferase, MAGNESIUM ION, {[(2R)-2-[(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)methyl]-3-(2-phosphonoethoxy)propoxy]methyl}phosphonic acid
Authors:Guddat, L.W, Keough, D.T.
Deposit date:2017-06-22
Release date:2017-08-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.346 Å)
Cite:Synthesis and Evaluation of Asymmetric Acyclic Nucleoside Bisphosphonates as Inhibitors of Plasmodium falciparum and Human Hypoxanthine-Guanine-(Xanthine) Phosphoribosyltransferase.
J. Med. Chem., 60, 2017
168L
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BU of 168l by Molmil
PROTEIN FLEXIBILITY AND ADAPTABILITY SEEN IN 25 CRYSTAL FORMS OF T4 LYSOZYME
Descriptor: T4 LYSOZYME
Authors:Zhang, X.-J, Matthews, B.W.
Deposit date:1995-03-24
Release date:1995-07-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Protein flexibility and adaptability seen in 25 crystal forms of T4 lysozyme.
J.Mol.Biol., 250, 1995
3G36
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BU of 3g36 by Molmil
Crystal structure of the human DPY-30-like C-terminal domain
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ...
Authors:Wang, X, Lou, Z, Bartlam, M, Rao, Z.
Deposit date:2009-02-02
Release date:2009-06-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of the C-terminal domain of human DPY-30-like protein: A component of the histone methyltransferase complex
J.Mol.Biol., 390, 2009
4RQR
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BU of 4rqr by Molmil
Crystal Structure of Human Glutaredoxin with MESNA
Descriptor: 1-THIOETHANESULFONIC ACID, Glutaredoxin-1
Authors:Badger, J, Sridhar, V, Logan, C, Hausheer, F.H, Nienaber, V.L.
Deposit date:2014-11-04
Release date:2015-04-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Cysteine Specific Targeting of the Functionally Distinct Peroxiredoxin and Glutaredoxin Proteins by the Investigational Disulfide BNP7787.
Molecules, 20, 2015
1OF4
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BU of 1of4 by Molmil
Structural and thermodynamic dissection of specific mannan recognition by a carbohydrate-binding module, TmCBM27
Descriptor: BETA-MANNOSIDASE, CALCIUM ION, GLYCEROL, ...
Authors:Boraston, A.B, Revett, T.J, Boraston, C.M, Nurizzo, D, Davies, G.J.
Deposit date:2003-04-07
Release date:2003-04-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and Thermodynamic Dissection of Specific Mannan Recognition by a Carbohydrate Binding Module, Tmcbm27
Structure, 11, 2003
5YQN
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BU of 5yqn by Molmil
Crystal structure of Sirt2 in complex with selective inhibitor L55
Descriptor: DI(HYDROXYETHYL)ETHER, N-[3-[[3-[2-(4,6-dimethylpyrimidin-2-yl)sulfanylethanoylamino]phenyl]methoxy]phenyl]-1-methyl-pyrazole-4-carboxamide, NAD-dependent protein deacetylase sirtuin-2, ...
Authors:Wang, H, Yu, Y, Li, G, Chen, Q.
Deposit date:2017-11-07
Release date:2018-10-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray crystal structure guided discovery of new selective, substrate-mimicking sirtuin 2 inhibitors that exhibit activities against non-small cell lung cancer cells.
Eur J Med Chem, 155, 2018
7JSN
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BU of 7jsn by Molmil
Structure of the Visual Signaling Complex between Transducin and Phosphodiesterase 6
Descriptor: 2-{2-ETHOXY-5-[(4-ETHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}-5-METHYL-7-PROPYLIMIDAZO[5,1-F][1,2,4]TRIAZIN-4(1H)-ONE, GUANOSINE-3',5'-MONOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Gao, Y, Eskici, G, Ramachandran, S, Skiniotis, G, Cerione, R.A.
Deposit date:2020-08-15
Release date:2020-10-21
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the Visual Signaling Complex between Transducin and Phosphodiesterase 6.
Mol.Cell, 80, 2020
4AF3
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BU of 4af3 by Molmil
Human Aurora B Kinase in complex with INCENP and VX-680
Descriptor: AURORA KINASE B, CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE, INNER CENTROMERE PROTEIN
Authors:Elkins, J.M, Vollmar, M, Wang, J, Picaud, S, Arrowsmith, C.H, Edwards, A, Bountra, C, von Delft, F, Knapp, S.
Deposit date:2012-01-16
Release date:2012-04-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal Structure of Human Aurora B in Complex with Incenp and Vx-680.
J.Med.Chem., 55, 2012
6LOP
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BU of 6lop by Molmil
Crystal Structure of Class IB terpene synthase bound with geranylgeraniol
Descriptor: (2~{E},6~{E},10~{E})-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-ol, Tetraprenyl-beta-curcumene synthase
Authors:Fujihashi, M, Inagi, H, Miki, K.
Deposit date:2020-01-07
Release date:2020-11-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Characterization of Class IB Terpene Synthase: The First Crystal Structure Bound with a Substrate Surrogate.
Acs Chem.Biol., 15, 2020
5YT6
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BU of 5yt6 by Molmil
Crystal structure of TAX1BP1 UBZ2 in complex with mono-ubiquitin
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
Authors:Pan, L, Hu, S.
Deposit date:2017-11-17
Release date:2018-07-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Mechanistic Insights into Recognitions of Ubiquitin and Myosin VI by Autophagy Receptor TAX1BP1.
J. Mol. Biol., 430, 2018
2B7A
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BU of 2b7a by Molmil
The structural basis of Janus Kinase 2 inhibition by a potent and specific pan-Janus kinase inhibitor
Descriptor: 2-TERT-BUTYL-9-FLUORO-3,6-DIHYDRO-7H-BENZ[H]-IMIDAZ[4,5-F]ISOQUINOLINE-7-ONE, Tyrosine-protein kinase JAK2
Authors:Lucet, I.S, Fantino, E, Styles, M, Bamert, R, Patel, O, Broughton, S.E, Walter, M, Burns, C.J, Treutlein, H, Wilks, A.F, Rossjohn, J.
Deposit date:2005-10-04
Release date:2006-01-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structural basis of Janus kinase 2 inhibition by a potent and specific pan-Janus kinase inhibitor.
Blood, 107, 2006
7C7M
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BU of 7c7m by Molmil
The structure of SAM-bound CntL, an aminobutyrate transferase in staphylopine biosysnthesis
Descriptor: 1,2-ETHANEDIOL, S-ADENOSYLMETHIONINE, Staphylopine biosynthesis enzyme CntL
Authors:Luo, Z, Luo, S, Zhou, H.
Deposit date:2020-05-26
Release date:2021-04-28
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural insights into the ligand recognition and catalysis of the key aminobutanoyltransferase CntL in staphylopine biosynthesis.
Faseb J., 35, 2021
2VOW
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BU of 2vow by Molmil
An oxidized tryptophan facilitates copper-binding in Methylococcus capsulatus secreted protein MopE. The structure of recombinant MopE to 1.65AA
Descriptor: CALCIUM ION, GLYCEROL, SURFACE-ASSOCIATED PROTEIN
Authors:Helland, R, Fjellbirkeland, A, Karlsen, O.A, Ve, T, Lillehaug, J.R, Jensen, H.B.
Deposit date:2008-02-22
Release date:2008-03-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:An Oxidized Tryptophan Facilitates Copper Binding in Methylococcus Capsulatus-Secreted Protein Mope.
J.Biol.Chem., 283, 2008

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