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5GTK
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BU of 5gtk by Molmil
NAD+ complex structure of aldehyde dehydrogenase from bacillus cereus
Descriptor: Betaine-aldehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
Authors:Ngo, H.P.T, Hong, S.H, Ho, T.H, Oh, D.K, Kang, L.W.
Deposit date:2016-08-21
Release date:2017-09-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of aldehyde dehydrogenase from Bacillus cereus having atypical bidirectional oxidizing and reducing activities for all-trans-retinal
To Be Published
9EZ0
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BU of 9ez0 by Molmil
Poliovirus type 1 (strain Mahoney) expanded conformation stabilised virus-like particle (PV1 SC6b) from a yeast expression system.
Descriptor: Capsid protein VP0, Capsid protein VP1, Capsid protein VP3
Authors:Bahar, M.W, Sherry, L, Stonehouse, N.J, Rowlands, D.J, Fry, E.E, Stuart, D.I.
Deposit date:2024-04-10
Release date:2025-01-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Recombinant expression systems for production of stabilised virus-like particles as next-generation polio vaccines.
Nat Commun, 16, 2025
3U9W
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BU of 3u9w by Molmil
Structure of human Leukotriene A4 hydrolase in complex with inhibitor sc57461A
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Niegowski, D, Thunnissen, M, Tholander, F, Rinaldo-Matthis, A, Muroya, A, Haeggstrom, J.Z.
Deposit date:2011-10-20
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure of human Leukotriene A4 hydrolase in complex with inhibitor sc57461A
To be Published
4YSV
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BU of 4ysv by Molmil
Structure of aminoacid racemase in apo-form
Descriptor: Putative 4-aminobutyrate aminotransferase
Authors:Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
Deposit date:2015-03-17
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
1RFX
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BU of 1rfx by Molmil
Crystal Structure of resisitin
Descriptor: ACETATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Patel, S.D, Rajala, M.W, Scherer, P.E, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-11-10
Release date:2004-06-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Disulfide-dependent multimeric assembly of resistin family hormones
Science, 304, 2004
8G45
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BU of 8g45 by Molmil
Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with SGC-UBD253 chemical probe
Descriptor: 3-[8-chloro-3-(2-{[(2-methoxyphenyl)methyl]amino}-2-oxoethyl)-4-oxo-3,4-dihydroquinazolin-2-yl]propanoic acid, Histone deacetylase 6, ZINC ION
Authors:Harding, R.J, Franzoni, I, Mann, M.K, Szewczyk, M, Mirabi, B, Owens, D.D.G, Ackloo, S, Scheremetjew, A, Juarez-Ornelas, K.A, Sanichar, R, Baker, R.J, Dank, C, Brown, P.J, Barsyte-Lovejoy, D, Santhakumar, V, Schapira, M, Lautens, M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2023-02-08
Release date:2023-05-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Discovery and Characterization of a Chemical Probe Targeting the Zinc-Finger Ubiquitin-Binding Domain of HDAC6.
J.Med.Chem., 66, 2023
4YL6
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BU of 4yl6 by Molmil
Crystal structure of truncated cerebral cavernous malformation 2 C-terminal adaptor domain in complex with an internal helix of mitogen-activated protein kinase kinase kinase 3
Descriptor: Malcavernin, Mitogen-activated protein kinase kinase kinase 3
Authors:Ding, J, Wang, X, Wang, D.C.
Deposit date:2015-03-05
Release date:2015-06-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights into the Molecular Recognition between Cerebral Cavernous Malformation 2 and Mitogen-Activated Protein Kinase Kinase Kinase 3
Structure, 23, 2015
5CZO
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BU of 5czo by Molmil
Structure of S. cerevisiae Hrr25:Mam1 complex, form 2
Descriptor: Casein kinase I homolog HRR25, Monopolin complex subunit MAM1, ZINC ION
Authors:Ye, Q, Corbett, K.D.
Deposit date:2015-07-31
Release date:2016-08-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.894 Å)
Cite:Structure of the Saccharomyces cerevisiae Hrr25:Mam1 monopolin subcomplex reveals a novel kinase regulator.
Embo J., 35, 2016
8G43
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BU of 8g43 by Molmil
Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with 3-(3-(2-(methylamino)-2-oxoethyl)-4-oxo-3,4-dihydroquinazolin-2-yl)propanoic acid
Descriptor: 3-{3-[2-(methylamino)-2-oxoethyl]-4-oxo-3,4-dihydroquinazolin-2-yl}propanoic acid, Histone deacetylase 6, ZINC ION
Authors:Harding, R.J, Franzoni, I, Mann, M.K, Szewczyk, M, Mirabi, B, Owens, D.D.G, Ackloo, S, Scheremetjew, A, Juarez-Ornelas, K.A, Sanichar, R, Baker, R.J, Dank, C, Brown, P.J, Barsyte-Lovejoy, D, Santhakumar, V, Schapira, M, Lautens, M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2023-02-08
Release date:2023-05-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery and Characterization of a Chemical Probe Targeting the Zinc-Finger Ubiquitin-Binding Domain of HDAC6.
J.Med.Chem., 66, 2023
8Z48
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BU of 8z48 by Molmil
Beta-galactosidase from Bacteroides xylanisolvens (complex with methyl beta-galactopyranose)
Descriptor: Beta-galactosidase, methyl beta-D-galactopyranoside
Authors:Nakajima, M, Motouchi, S, Kobayashi, K.
Deposit date:2024-04-16
Release date:2025-01-01
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure and function of a beta-1,2-galactosidase from Bacteroides xylanisolvens, an intestinal bacterium.
Commun Biol, 8, 2025
5CT3
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BU of 5ct3 by Molmil
The structure of the NK1 fragment of HGF/SF complexed with 2FA
Descriptor: 3-hydroxypropane-1-sulfonic acid, Hepatocyte growth factor
Authors:Sigurdardottir, A.G, Winter, A, Sobkowicz, A, Fragai, M, Chirgadze, D.Y, Ascher, D.B, Blundell, T.L, Gherardi, E.
Deposit date:2015-07-23
Release date:2015-08-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Exploring the chemical space of the lysine-binding pocket of the first kringle domain of hepatocyte growth factor/scatter factor (HGF/SF) yields a new class of inhibitors of HGF/SF-MET binding.
Chem Sci, 6, 2015
4IN9
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BU of 4in9 by Molmil
Structure of karilysin MMP-like catalytic domain in complex with inhibitory tetrapeptide SWFP
Descriptor: GLYCEROL, Karilysin protease, POTASSIUM ION, ...
Authors:Guevara, T, Ksiazek, M, Skottrup, P.D, Cerda-Costa, N, Trillo-Muyo, S, de Diego, I, Riise, E, Potempa, J, Gomis-Ruth, F.X.
Deposit date:2013-01-04
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of the catalytic domain of the Tannerella forsythia matrix metallopeptidase karilysin in complex with a tetrapeptidic inhibitor.
Acta Crystallogr.,Sect.F, 69, 2013
5U9X
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BU of 5u9x by Molmil
Ocellatin-LB2
Descriptor: Ocellatin-K1
Authors:Gusmao, K.A.G, dos Santos, D.M, Santos, V.M, Pilo-Veloso, D, de Lima, M.E, Resende, J.M.
Deposit date:2016-12-18
Release date:2017-03-01
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Ocellatin-LB2
To Be Published
8Z47
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BU of 8z47 by Molmil
Beta-galactosidase from Bacteroides xylanisolvens (ligand-free)
Descriptor: Beta-galactosidase, alpha-D-galactopyranose
Authors:Nakajima, M, Motouchi, S, Kobayashi, K.
Deposit date:2024-04-16
Release date:2025-01-01
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure and function of a beta-1,2-galactosidase from Bacteroides xylanisolvens, an intestinal bacterium.
Commun Biol, 8, 2025
6MAU
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BU of 6mau by Molmil
Crystal structure of human BRD4(1) in complex with CN210 (compound 19)
Descriptor: 1-(4-{6-(3,5-dimethyl-1,2-oxazol-4-yl)-4-[(3S)-3-phenylmorpholin-4-yl]quinazolin-2-yl}-1H-pyrazol-1-yl)-2-methylpropan-2-ol, Bromodomain-containing protein 4, GLYCEROL
Authors:Nadupalli, A, Fontano, E, Connors, C.R, Chan, S.G, Olland, A.M, Lakshminarasimhan, D, White, A, Suto, R.K.
Deposit date:2018-08-28
Release date:2019-04-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Lead optimization and efficacy evaluation of quinazoline-based BET family inhibitors for potential treatment of cancer and inflammatory diseases.
Bioorg. Med. Chem. Lett., 29, 2019
5U02
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BU of 5u02 by Molmil
Crystal structure of S. aureus TarS 217-571
Descriptor: Glycosyl transferase, IMIDAZOLE
Authors:Worrall, L.J, Sobhanifar, S, King, D.T, Strynadka, N.C.
Deposit date:2016-11-22
Release date:2017-01-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structure and Mechanism of Staphylococcus aureus TarS, the Wall Teichoic Acid beta-glycosyltransferase Involved in Methicillin Resistance.
PLoS Pathog., 12, 2016
4BYZ
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BU of 4byz by Molmil
Structural characterization using Sulfur-SAD of the cytoplasmic domain of Burkholderia pseudomallei PilO2Bp, an actin-like protein component of a Type IVb R64-derivative pilus machinery.
Descriptor: PHOSPHATE ION, POTASSIUM ION, TYPE IV PILUS BIOSYNTHESIS PROTEIN
Authors:Lassaux, P, Manjasetty, B.A, Conchillo-Sole, O, Yero, D, Gourlay, L, Perletti, L, Daura, X, Belrhali, H, Bolognesi, M.
Deposit date:2013-07-22
Release date:2014-04-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Redefining the Pf06864 Pfam Family Based on Burkholderia Pseudomallei Pilo2BP S-Sad Crystal Structure.
Plos One, 9, 2014
8G44
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BU of 8g44 by Molmil
Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with 3-(3-(2-(benzylamino)-2-oxoethyl)-4-oxo-3,4-dihydroquinazolin-2-yl)propanoic acid
Descriptor: 3-{3-[2-(benzylamino)-2-oxoethyl]-4-oxo-3,4-dihydroquinazolin-2-yl}propanoic acid, Histone deacetylase 6, ZINC ION
Authors:Harding, R.J, Franzoni, I, Mann, M.K, Szewczyk, M, Mirabi, B, Owens, D.D.G, Ackloo, S, Scheremetjew, A, Juarez-Ornelas, K.A, Sanichar, R, Baker, R.J, Dank, C, Brown, P.J, Barsyte-Lovejoy, D, Santhakumar, V, Schapira, M, Lautens, M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2023-02-08
Release date:2023-05-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery and Characterization of a Chemical Probe Targeting the Zinc-Finger Ubiquitin-Binding Domain of HDAC6.
J.Med.Chem., 66, 2023
4C90
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BU of 4c90 by Molmil
Evidence that GH115 alpha-glucuronidase activity is dependent on conformational flexibility
Descriptor: ALPHA-GLUCURONIDASE GH115, SODIUM ION
Authors:Rogowski, A, Basle, A, Farinas, C.S, Solovyova, A, Mortimer, J.C, Dupree, P, Gilbert, H.J, Bolam, D.N.
Deposit date:2013-10-02
Release date:2013-11-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Evidence that Gh115 Alpha-Glucuronidase Activity is Dependent on Conformational Flexibility
J.Biol.Chem., 289, 2014
4IP1
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BU of 4ip1 by Molmil
C-terminal domain of the thiol:disulfide interchange protein DsbD, Q488K mutant
Descriptor: Thiol:disulfide interchange protein DsbD
Authors:Saridakis, E, Mavridou, D.A.I, Redfield, C.
Deposit date:2013-01-09
Release date:2013-12-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:An Extended Active-site Motif Controls the Reactivity of the Thioredoxin Fold.
J.Biol.Chem., 289, 2014
6MBQ
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BU of 6mbq by Molmil
Crystal structure of Mg-free wild-type KRAS (2-166) bound to GMPPNP in the state 1 conformation
Descriptor: 1,2-ETHANEDIOL, GTPase KRas, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Dharmaiah, S, Davies, D.R, Abendroth, J, Gillette, W.G, Stephen, A.G, Simanshu, D.K.
Deposit date:2018-08-30
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structures of N-terminally processed KRAS provide insight into the role of N-acetylation.
Sci Rep, 9, 2019
5QC5
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BU of 5qc5 by Molmil
Crystal structure of human Cathepsin-S with bound ligand
Descriptor: 1-[5-{1-[3-(4-tert-butylpiperidin-1-yl)propyl]-5-(methylsulfonyl)-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl}-2-(trifluoromethyl)phenyl]-N-[(4-fluorophenyl)methyl]methanamine, Cathepsin S
Authors:Bembenek, S.D, Ameriks, M.K, Mirzadegan, T, Yang, H, Shao, C, Burley, S.K.
Deposit date:2017-08-04
Release date:2017-12-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of human Cathepsin-S with bound ligand
To be published
4YQF
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BU of 4yqf by Molmil
GTPase domain of Human Septin 9
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Septin-9
Authors:Matos, S.O, Leonardo, D.A, Macedo, J.N, Pereira, H.M, Araujo, A.P.U, Garratt, R.C.
Deposit date:2015-03-13
Release date:2016-03-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:GTPase domain of Human Septin 9
To Be Published
4IRA
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BU of 4ira by Molmil
CobR in complex with FAD
Descriptor: 4-hydroxyphenylacetate 3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
Authors:Lawrence, A.D, Scott, A.F, Warren, M.J, Pickersgill, R.W.
Deposit date:2013-01-14
Release date:2014-01-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biophysical characterisation and structure-function analysis of Brucella melitensis CobR: Protein-flavin interactions determine function and stability
To be Published
6M9B
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BU of 6m9b by Molmil
Wild-type streptavidin in complex with biotin solved by native SAD with data collected at 6 keV
Descriptor: BIOTIN, Streptavidin
Authors:Finke, A.D.
Deposit date:2018-08-23
Release date:2019-04-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.548 Å)
Cite:Making routine native SAD a reality: lessons from beamline X06DA at the Swiss Light Source.
Acta Crystallogr D Struct Biol, 75, 2019

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