PDB: 47720 resultsInfo pagesStatus searchChemie searchBIRD

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8EV8	Cryo-EM structure of cGMP bound truncated human CNGA3/CNGB3 channel in lipid nanodisc, closed state Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYCLIC GUANOSINE MONOPHOSPHATE, Cyclic nucleotide-gated cation channel alpha-3, ... Authors: Hu, Z, Yang, J. Deposit date: 2022-10-20 Release date: 2023-08-09 Method: ELECTRON MICROSCOPY (3.11 Å) Cite: Conformational trajectory of allosteric gating of the human cone photoreceptor cyclic nucleotide-gated channel. Nat Commun, 14, 2023
8EVC	Cryo-EM structure of cGMP bound truncated human CNGA3/CNGB3 channel in lipid nanodisc, open state Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYCLIC GUANOSINE MONOPHOSPHATE, Cyclic nucleotide-gated cation channel alpha-3, ... Authors: Hu, Z, Yang, J. Deposit date: 2022-10-20 Release date: 2023-08-09 Method: ELECTRON MICROSCOPY (3.33 Å) Cite: Conformational trajectory of allosteric gating of the human cone photoreceptor cyclic nucleotide-gated channel. Nat Commun, 14, 2023
4BW9	PylRS Y306G, Y384F, I405R mutant in complex with AMP-PNP Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ... Authors: Schneider, S, Vrabel, M, Gattner, M.J, Fluegel, V, Lopez-Carillo, V, Carell, T. Deposit date: 2013-07-01 Release date: 2013-07-31 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Structural Insights Into Incorporation of Norbornene Amino Acids for Click Modification of Proteins Chem.Bio.Chem., 14, 2013
4BR3	Determination of potential scaffolds for human choline kinase alpha 1 by chemical deconvolution studies Descriptor: 1-((4'-((6-amino-3H-purin-3-yl)methyl)biphenyl-4-yl)methyl)-4-(dimethylamino)pyridinium, 3-benzyladenine, CHOLINE KINASE ALPHA, ... Authors: Sahun-Roncero, M, Rubio-Ruiz, B, Conejo-Garcia, A, Velazquez-Campoy, A, Entrena, A, Hurtado-Guerrero, R. Deposit date: 2013-06-03 Release date: 2013-06-19 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Determination of Potential Scaffolds for Human Choline Kinase Alpha 1 by Chemical Deconvolution Studies Chembiochem, 14, 2013
8ERC	Human Membrane-bound O-acyltransferase 7 Descriptor: Lysophospholipid acyltransferase 7 Authors: Wang, K, Liao, M, Farese, R.V, Walther, T.C. Deposit date: 2022-10-11 Release date: 2023-09-27 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: The structure of phosphatidylinositol remodeling MBOAT7 reveals its catalytic mechanism and enables inhibitor identification. Nat Commun, 14, 2023
8ELI	Broadly neutralizing antibody VRC34-combo.1 in complex with HIV fusion peptide (residue 512-519) Descriptor: Fusion peptide, VRC34-combo.1 Fab Heavy chain, VRC34-combo.1 Fab Light chain Authors: Xu, K, Kwong, P.D. Deposit date: 2022-09-24 Release date: 2023-09-27 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.49 Å) Cite: Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site. Nat Commun, 14, 2023
8EUV	Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-COMBO1 FAB Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ... Authors: Pletnev, S, Kwong, P. Deposit date: 2022-10-19 Release date: 2023-09-27 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site. Nat Commun, 14, 2023
2MPS	Structure of complex of MDM2(3-109) and P73 TAD(10-25) Descriptor: E3 ubiquitin-protein ligase Mdm2, Tumor protein p73 Authors: Shin, J.S, Ha, J.H, Chi, S.W. Deposit date: 2014-06-02 Release date: 2015-06-03 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural convergence of unstructured p53 family transactivation domains in MDM2 recognition Cell Cycle, 14, 2015
8EUW	Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ... Authors: Pletnev, S, Kwong, P. Deposit date: 2022-10-19 Release date: 2023-09-27 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site. Nat Commun, 14, 2023
8EUU	Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01 FAB Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ... Authors: Pletnev, S, Kwong, P. Deposit date: 2022-10-19 Release date: 2023-09-27 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site. Nat Commun, 14, 2023
8F5I	SARS-CoV-2 S2 helix epitope scaffold bound by antibody DH1057.1 Descriptor: DH1057.1 HC, DH1057.1 LC, Specialized acyl carrier protein, ... Authors: Kapingidza, A.B, Wrapp, D, Winters, K, Azoitei, M.L. Deposit date: 2022-11-14 Release date: 2023-10-11 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Engineered immunogens to elicit antibodies against conserved coronavirus epitopes. Nat Commun, 14, 2023
3ZD6	Snapshot 1 of RIG-I scanning on RNA duplex Descriptor: PROBABLE ATP-DEPENDENT RNA HELICASE DDX58, RNA DUPLEX, ZINC ION Authors: Luo, D, Pyle, A.M. Deposit date: 2012-11-25 Release date: 2013-08-07 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Defining the Functional Determinants for RNA Surveillance by Rig-I. Embo Rep., 14, 2013
8F5H	SARS-CoV-2 S2 helix epitope scaffold Descriptor: S2hlx_EX_19 Authors: Kapingidza, A.B, Wrapp, D, Winters, K, Azoitei, M.L. Deposit date: 2022-11-14 Release date: 2023-10-11 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Engineered immunogens to elicit antibodies against conserved coronavirus epitopes. Nat Commun, 14, 2023
8EI9	Crystal structure of beta-catenin and the MDM2 p53-binding domain in complex with H332, a Helicon Polypeptide Descriptor: Catenin beta-1, E3 ubiquitin-protein ligase Mdm2, H332, ... Authors: Li, K, Travaline, T.L, Swiecicki, J.-M, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (3.9 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023
8EI8	Crystal structure of the WWP2 HECT domain in complex with H308, a Helicon Polypeptide Descriptor: 1,2-ETHANEDIOL, H308, N,N'-(1,4-phenylene)diacetamide, ... Authors: Li, K, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023
8EI1	Crystal structure of the N-terminal domain of CUL4B in complex with H316, a Helicon Polypeptide Descriptor: Cullin-4B, H316, N,N'-(1,4-phenylene)diacetamide Authors: Li, K, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.89 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023
8EI7	Crystal structure of the WWP2 HECT domain in complex with H304, a Helicon Polypeptide Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Li, K, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023
8ETQ	Designed pentafoil knot protein folded into a trefoil knot Descriptor: k-cTRP5 Authors: Doyle, L.A, Kibler, R.D, Bradley, P, Stoddard, B.L. Deposit date: 2022-10-17 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.42 Å) Cite: De novo design of knotted tandem repeat proteins. Nat Commun, 14, 2023
8EI2	Crystal structure of the N-terminal domain of CUL5 in complex with H314, a Helicon Polypeptide Descriptor: Cullin-5, H314, N,N'-(1,4-phenylene)diacetamide Authors: Li, K, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023
8EIC	Crystal structure of beta-catenin and the MDM2 p53-binding domain in complex with H330, a Helicon Polypeptide Descriptor: Catenin beta-1, E3 ubiquitin-protein ligase Mdm2, H330, ... Authors: Li, K, Travaline, T.L, Swiecicki, J.-M, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.62 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023
8EIB	Crystal structure of beta-catenin and the MDM2 p53-binding domain in complex with H329, a Helicon Polypeptide Descriptor: Catenin beta-1, E3 ubiquitin-protein ligase Mdm2, H329, ... Authors: Li, K, Travaline, T.L, Swiecicki, J.-M, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (3.76 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023
8EHZ	Crystal structure of the STUB1 TPR domain in complex with H317, a Helicon Polypeptide Descriptor: E3 ubiquitin-protein ligase CHIP, H317, N,N'-(1,4-phenylene)diacetamide Authors: Li, K, Swiecicki, J.-M, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.06 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023
8EI0	Crystal structure of the STUB1 TPR domain in complex with H318, a Helicon Polypeptide Descriptor: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase CHIP, H318, ... Authors: Li, K, Swiecicki, J.-M, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.47 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023
8EI3	Crystal structure of VHL in complex with H313, a Helicon Polypeptide Descriptor: Elongin-B, Elongin-C, H313, ... Authors: Li, K, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (3.49 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023
8EI6	Crystal structure of the WWP2 HECT domain in complex with H305, a Helicon Polypeptide Descriptor: H305, N,N'-(1,4-phenylene)diacetamide, NEDD4-like E3 ubiquitin-protein ligase WWP2 Authors: Li, K, Tokareva, O.S, Thomson, T.M, Verdine, G.L, McGee, J.H. Deposit date: 2022-09-14 Release date: 2023-10-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (3.62 Å) Cite: Recognition and reprogramming of E3 ubiquitin ligase surfaces by alpha-helical peptides. Nat Commun, 14, 2023

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