Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5FGZ
DownloadVisualize
BU of 5fgz by Molmil
E. coli PBP1b in complex with FPI-1465
Descriptor: MOENOMYCIN, Penicillin-binding protein 1B, [[(3~{R},6~{S})-1-methanoyl-6-[[(3~{S})-pyrrolidin-3-yl]oxycarbamoyl]piperidin-3-yl]amino] hydrogen sulfate
Authors:King, D.T, Strynadka, N.C.J.
Deposit date:2015-12-21
Release date:2016-01-20
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural and Kinetic Characterization of Diazabicyclooctanes as Dual Inhibitors of Both Serine-beta-Lactamases and Penicillin-Binding Proteins.
Acs Chem.Biol., 11, 2016
2JE5
DownloadVisualize
BU of 2je5 by Molmil
STRUCTURAL AND MECHANISTIC BASIS OF PENICILLIN BINDING PROTEIN INHIBITION BY LACTIVICINS
Descriptor: (2E)-2-{[(2S)-2-(ACETYLAMINO)-2-CARBOXYETHOXY]IMINO}PENTANEDIOIC ACID, CHLORIDE ION, PENICILLIN-BINDING PROTEIN 1B, ...
Authors:Macheboeuf, P, Fisher, D.S, Brown, T.J, Zervosen, A, Luxen, A, Joris, B, Dessen, A, Schofield, C.J.
Deposit date:2007-01-15
Release date:2007-08-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Mechanistic Basis of Penicillin-Binding Protein Inhibition by Lactivicins
Nat.Chem.Biol., 3, 2007
2JCH
DownloadVisualize
BU of 2jch by Molmil
Structural and mechanistic basis of penicillin binding protein inhibition by lactivicins
Descriptor: (2E)-2-({(2S)-2-CARBOXY-2-[(PHENOXYACETYL)AMINO]ETHOXY}IMINO)PENTANEDIOIC ACID, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Macheboeuf, P, Fisher, D.S, Brown, T.J, Zervosen, A, Luxen, A, Joris, B, Dessen, A, Schofield, C.J.
Deposit date:2006-12-23
Release date:2007-08-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Mechanistic Basis of Penicillin-Binding Protein Inhibition by Lactivicins
Nat.Chem.Biol., 3, 2007
6SYN
DownloadVisualize
BU of 6syn by Molmil
Crystal structure of Y. pestis penicillin-binding protein 3
Descriptor: (2R,4S)-2-[(1R)-1-{[(2S)-2-carboxy-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, ACETATE ION, Peptidoglycan D,D-transpeptidase FtsI
Authors:Pankov, G, Hunter, W.N, Dawson, A.
Deposit date:2019-09-30
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:The structure of penicillin-binding protein 3 from Yersinia pestis
To Be Published
6TIX
DownloadVisualize
BU of 6tix by Molmil
Crystal structure of penicillin-binding protein 2 from Yersinia pestis in complex with mecillinam
Descriptor: 2-[(1R)-1-{[(E)-azepan-1-ylmethylidene]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Peptidoglycan D,D-transpeptidase MrdA
Authors:Pankov, G, Hunter, W.N, Dawson, A.
Deposit date:2019-11-22
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structure of penicillin-binding protein 2 from Yersinia pestis in complex with mecillinam
To Be Published
8BH1
DownloadVisualize
BU of 8bh1 by Molmil
Core divisome complex FtsWIQBL from Pseudomonas aeruginosa
Descriptor: Cell division protein FtsB, Cell division protein FtsL, Cell division protein FtsQ, ...
Authors:Kaeshammer, L, van den Ent, F, Jeffery, M, Lowe, J.
Deposit date:2022-10-28
Release date:2023-04-19
Last modified:2023-06-14
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of the bacterial divisome core complex and antibiotic target FtsWIQBL.
Nat Microbiol, 8, 2023
4DKI
DownloadVisualize
BU of 4dki by Molmil
Structural Insights into the Anti- Methicillin-Resistant Staphylococcus aureus (MRSA) Activity of Ceftobiprole
Descriptor: (2R)-2-[(1R)-1-{[(2Z)-2-(5-amino-1,2,4-thiadiazol-3-yl)-2-(hydroxyimino)acetyl]amino}-2-oxoethyl]-5-({2-oxo-1-[(3R)-pyrrolidin-3-yl]-2,5-dihydro-1H-pyrrol-3-yl}methyl)-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, BICARBONATE ION, CADMIUM ION, ...
Authors:Lovering, A.L, Gretes, M.C, Strynadka, N.C.J.
Deposit date:2012-02-03
Release date:2012-08-01
Last modified:2012-10-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Insights into the Anti-methicillin-resistant Staphylococcus aureus (MRSA) Activity of Ceftobiprole.
J.Biol.Chem., 287, 2012
8C5W
DownloadVisualize
BU of 8c5w by Molmil
Crystal Structure of Penicillin-binding Protein 3 (PBP3) from Staphylococcus Epidermidis in complex with Cefotaxime
Descriptor: CEFOTAXIME, C3' cleaved, open, ...
Authors:Schwinzer, M, Brognaro, H, Rohde, H, Betzel, C.
Deposit date:2023-01-10
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure and Dynamics of the Penicillin-Binding Protein 3 from Staphylococcus Epidermidis Native and in Complex with Cefotaxime and Vaborbactam
Int J Appl Biol Pharm, 2023
8C5B
DownloadVisualize
BU of 8c5b by Molmil
Crystal Structure of Penicillin-binding Protein 3 (PBP3) from Staphylococcus Epidermidis
Descriptor: Penicillin-binding protein 3
Authors:Schwinzer, M, Brognaro, H, Rohde, H, Betzel, C.
Deposit date:2023-01-06
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Dynamics of the Penicillin-Binding Protein 3 from Staphylococcus Epidermidis Native and in Complex with Cefotaxime and Vaborbactam
Int J Appl Biol Pharm, 2023
8C5O
DownloadVisualize
BU of 8c5o by Molmil
Crystal Structure of Penicillin-binding Protein 3 (PBP3) from Staphylococcus Epidermidis in complex with Vaborbactam
Descriptor: Penicillin-binding protein 3, Vaborbactam
Authors:Schwinzer, M, Brognaro, H, Rohde, H, Betzel, C.
Deposit date:2023-01-10
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Dynamics of the Penicillin-Binding Protein 3 from Staphylococcus Epidermidis Native and in Complex with Cefotaxime and Vaborbactam
Int J Appl Biol Pharm, 2023
4FSF
DownloadVisualize
BU of 4fsf by Molmil
Crystal structure of Pseudomonas aeruginosa PBP3 complexed with compound 14
Descriptor: (4R,5S,8Z)-8-(2-amino-1,3-thiazol-4-yl)-1-[3-(1,5-dihydroxy-4-oxo-1,4-dihydropyridin-2-yl)-1,2-oxazol-5-yl]-5-formyl-11,11-dimethyl-1,7-dioxo-4-(sulfoamino)-10-oxa-2,6,9-triazadodec-8-en-12-oic acid, Penicillin-binding protein 3
Authors:Han, S.
Deposit date:2012-06-27
Release date:2012-10-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Novel monobactams utilizing a siderophore uptake mechanism for the treatment of gram-negative infections.
Bioorg.Med.Chem.Lett., 22, 2012
6C84
DownloadVisualize
BU of 6c84 by Molmil
Crystal structure of PBP5 from Enterococcus faecium
Descriptor: Penicillin-binding protein
Authors:Shamoo, Y, Davlieva, M.
Deposit date:2018-01-24
Release date:2019-02-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.511 Å)
Cite:Crystal structure of PBP5 from Enterococcus faecium
To Be Published
3ZG5
DownloadVisualize
BU of 3zg5 by Molmil
Crystal structure of PBP2a from MRSA in complex with peptidoglycan analogue at allosteric
Descriptor: CADMIUM ION, CHLORIDE ION, PEPTIDOGLYCAN ANALOGUE, ...
Authors:Otero, L.H, Rojas-Altuve, A, Hermoso, J.A.
Deposit date:2012-12-14
Release date:2013-10-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:How Allosteric Control of Staphylococcus Aureus Penicillin Binding Protein 2A Enables Methicillin Resistance and Physiological Function
Proc.Natl.Acad.Sci.USA, 110, 2013
1PMD
DownloadVisualize
BU of 1pmd by Molmil
PENICILLIN-BINDING PROTEIN 2X (PBP-2X)
Descriptor: PEPTIDOGLYCAN SYNTHESIS MULTIFUNCTIONAL ENZYME
Authors:Pares, S, Mouz, N, Dideberg, O.
Deposit date:1996-02-05
Release date:1997-02-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:X-ray structure of Streptococcus pneumoniae PBP2x, a primary penicillin target enzyme.
Nat.Struct.Biol., 3, 1996
3ZG7
DownloadVisualize
BU of 3zg7 by Molmil
Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the apo form
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, PENICILLIN-BINDING PROTEIN 4
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2012-12-17
Release date:2013-05-29
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Crystal Structures of Bifunctional Penicillin-Binding Protein 4 from Listeria Monocytogenes.
Antimicrob.Agents Chemother., 57, 2013
3ZG9
DownloadVisualize
BU of 3zg9 by Molmil
Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Cefuroxime bound form
Descriptor: (2R)-5-[(carbamoyloxy)methyl]-2-[(1R)-1-{[(2Z)-2-(furan-2-yl)-2-(methoxyimino)acetyl]amino}-2-oxoethyl]-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, GLYCEROL, PENICILLIN-BINDING PROTEIN 4
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2012-12-17
Release date:2014-01-15
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:Crystal Structures of Penicillin-Binding Protein 4 from Listeria Monocytogenes
To be Published
6BSQ
DownloadVisualize
BU of 6bsq by Molmil
Enterococcus faecalis Penicillin Binding Protein 4 (PBP4)
Descriptor: CHLORIDE ION, GLYCEROL, PBP4 protein
Authors:Moon, T.M, D'Andrea, E.D, Peti, W, Page, R.
Deposit date:2017-12-04
Release date:2018-10-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structures of penicillin-binding protein 4 (PBP4) and PBP5 fromEnterococciprovide structural insights into beta-lactam resistance.
J. Biol. Chem., 293, 2018
7LY1
DownloadVisualize
BU of 7ly1 by Molmil
Crystal structure of Pseudomonas aeruginosa PBP3 in complex with vaborbactam
Descriptor: Peptidoglycan D,D-transpeptidase FtsI, Vaborbactam
Authors:van den Akker, F, Kumar, V.
Deposit date:2021-03-05
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of the boronic acid beta-lactamase inhibitor vaborbactam binding to Pseudomonas aeruginosa penicillin-binding protein 3.
Plos One, 16, 2021
3ZG8
DownloadVisualize
BU of 3zg8 by Molmil
Crystal Structure of Penicillin Binding Protein 4 from Listeria monocytogenes in the Ampicillin bound form
Descriptor: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, GLYCEROL, PENICILLIN-BINDING PROTEIN, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2012-12-17
Release date:2013-05-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.094 Å)
Cite:Crystal Structures of Bifunctional Penicillin-Binding Protein 4 from Listeria Monocytogenes.
Antimicrob.Agents Chemother., 57, 2013
1QME
DownloadVisualize
BU of 1qme by Molmil
PENICILLIN-BINDING PROTEIN 2X (PBP-2X)
Descriptor: PENICILLIN-BINDING PROTEIN 2X, SULFATE ION
Authors:Gordon, E.J, Mouz, N, Duee, E, Dideberg, O.
Deposit date:1999-09-28
Release date:2000-05-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Crystal Structure of the Penicillin-Binding Protein 2X from Streptococcus Pneumoniae and its Acyl-Enzyme Form: Implication in Drug Resistance.
J.Mol.Biol., 299, 2000
1QMF
DownloadVisualize
BU of 1qmf by Molmil
PENICILLIN-BINDING PROTEIN 2X (PBP-2X) ACYL-ENZYME COMPLEX
Descriptor: 2-[CARBOXY-(2-FURAN-2-YL-2-METHOXYIMINO-ACETYLAMINO)-METHYL]-5-METHYL-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, CEFUROXIME (OCT-3-ENE FORM), PENICILLIN-BINDING PROTEIN 2X
Authors:Gordon, E.J, Mouz, N, Duee, E, Dideberg, O.
Deposit date:1999-09-28
Release date:2000-05-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Crystal Structure of the Penicillin Binding Protein 2X from Streptococcus Pneumoniae and its Acyl-Enzyme Form: Implication in Drug Resistance
J.Mol.Biol., 299, 2000
8P1U
DownloadVisualize
BU of 8p1u by Molmil
Structure of divisome complex FtsWIQLB
Descriptor: Cell division protein FtsB, Cell division protein FtsL, Cell division protein FtsQ, ...
Authors:Yang, L, Chang, S, Tang, D, Dong, H.
Deposit date:2023-05-12
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into the activation of the divisome complex FtsWIQLB.
Cell Discov, 10, 2024
7LQ6
DownloadVisualize
BU of 7lq6 by Molmil
CryoEM structure of Escherichia coli PBP1b
Descriptor: Penicillin-binding protein 1B
Authors:Caveney, N.A, Workman, S.D, Yan, R, Atkinson, C.E, Yu, Z, Strynadka, N.C.J.
Deposit date:2021-02-13
Release date:2021-05-26
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:CryoEM structure of the antibacterial target PBP1b at 3.3 angstrom resolution.
Nat Commun, 12, 2021
5UY7
DownloadVisualize
BU of 5uy7 by Molmil
Crystal structure of a peptidoglycan glycosyltransferase from Burkholderia ambifaria
Descriptor: Peptidoglycan glycosyltransferase, SULFATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-02-23
Release date:2017-03-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of a peptidoglycan glycosyltransferase from Burkholderia ambifaria
To Be Published
1VQQ
DownloadVisualize
BU of 1vqq by Molmil
Structure of Penicillin binding protein 2a from methicillin resistant Staphylococcus aureus strain 27r at 1.80 A resolution.
Descriptor: CADMIUM ION, CHLORIDE ION, penicillin-binding protein mecA, ...
Authors:Lim, D, Strynadka, N.C.J.
Deposit date:2004-12-17
Release date:2004-12-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the beta lactam resistance of PBP2a from methicillin-resistant Staphylococcus aureus.
Nat.Struct.Biol., 9, 2002

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon