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PDB: 59 results

7UDB
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BU of 7udb by Molmil
Cryo-EM structure of a synaptobrevin-Munc18-1-syntaxin-1 complex class 2
Descriptor: Synaptobrevin-2, Syntaxin-1A, Syntaxin-binding protein 1
Authors:Rizo, J, Bai, X, Stepien, K.P, Xu, J, Zhang, X.
Deposit date:2022-03-18
Release date:2022-04-06
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:SNARE assembly enlightened by cryo-EM structures of a synaptobrevin-Munc18-1-syntaxin-1 complex.
Sci Adv, 8, 2022
1L4A
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BU of 1l4a by Molmil
X-RAY STRUCTURE OF THE NEURONAL COMPLEXIN/SNARE COMPLEX FROM THE SQUID LOLIGO PEALEI
Descriptor: S-SNAP25 fusion protein, S-SYNTAXIN, SYNAPHIN A, ...
Authors:Bracher, A, Kadlec, J, Betz, H, Weissenhorn, W.
Deposit date:2002-03-04
Release date:2002-07-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:X-ray structure of a neuronal complexin-SNARE complex from squid.
J.Biol.Chem., 277, 2002
5CCH
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BU of 5cch by Molmil
Structure of the Ca2+-bound synaptotagmin-1 SNARE complex (short unit cell form)
Descriptor: CALCIUM ION, Synaptosomal-associated protein 25, Synaptotagmin-1, ...
Authors:Zhou, Q, Zhao, M, Lyubimov, A.Y, Uervirojnangkoorn, M, Zeldin, O.B, Weis, W.I, Brunger, A.T.
Deposit date:2015-07-02
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Architecture of the synaptotagmin-SNARE machinery for neuronal exocytosis.
Nature, 525, 2015
6MDN
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BU of 6mdn by Molmil
The 20S supercomplex engaging the SNAP-25 N-terminus (class 2)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Alpha-soluble NSF attachment protein, ...
Authors:White, K.I, Zhao, M, Brunger, A.T.
Deposit date:2018-09-04
Release date:2018-09-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural principles of SNARE complex recognition by the AAA+ protein NSF.
Elife, 7, 2018
6MDM
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BU of 6mdm by Molmil
The 20S supercomplex engaging the SNAP-25 N-terminus (class 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Alpha-soluble NSF attachment protein, ...
Authors:White, K.I, Zhao, M, Brunger, A.T.
Deposit date:2018-09-04
Release date:2018-09-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural principles of SNARE complex recognition by the AAA+ protein NSF.
Elife, 7, 2018
5CCG
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BU of 5ccg by Molmil
Structure of the Ca2+-bound synaptotagmin-1 SNARE complex (long unit cell form)
Descriptor: CALCIUM ION, Synaptosomal-associated protein 25, Synaptotagmin-1, ...
Authors:Zhou, Q, Zhao, M, Lyubimov, A.Y, Uervirojnangkoorn, M, Zeldin, O.B, Weis, W.I, Brunger, A.T.
Deposit date:2015-07-02
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Architecture of the synaptotagmin-SNARE machinery for neuronal exocytosis.
Nature, 525, 2015
6MTI
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BU of 6mti by Molmil
Synaptotagmin-1 C2A, C2B domains and SNARE-pin proteins (5CCI) individually docked into Cryo-EM map of C2AB-SNARE complexes helically organized on lipid nanotube surface in presence of Mg2+
Descriptor: MAGNESIUM ION, Synaptosomal-associated protein 25, Synaptotagmin-1, ...
Authors:Grushin, K, Wang, J, Coleman, J, Rothman, J, Sindelar, C, Krishnakumar, S.
Deposit date:2018-10-19
Release date:2019-04-24
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (10.4 Å)
Cite:Structural basis for the clamping and Ca2+activation of SNARE-mediated fusion by synaptotagmin.
Nat Commun, 10, 2019
5CCI
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BU of 5cci by Molmil
Structure of the Mg2+-bound synaptotagmin-1 SNARE complex (short unit cell form)
Descriptor: MAGNESIUM ION, Synaptosomal-associated protein 25, Synaptotagmin-1, ...
Authors:Zhou, Q, Zhao, M, Lyubimov, A.Y, Uervirojnangkoorn, M, Weis, W.I, Brunger, A.T.
Deposit date:2015-07-02
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Architecture of the synaptotagmin-SNARE machinery for neuronal exocytosis.
Nature, 525, 2015
3EGD
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BU of 3egd by Molmil
Crystal structure of the mammalian COPII-coat protein Sec23a/24a complexed with the SNARE protein Sec22 and bound to the transport signal sequence of vesicular stomatitis virus glycoprotein
Descriptor: 10 residue peptide from VSV glycoprotein, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Goldberg, J, Mancias, J.D.
Deposit date:2008-09-10
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of cargo membrane protein discrimination by the human COPII coat machinery.
Embo J., 27, 2008
6IP1
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BU of 6ip1 by Molmil
alpha-SNAP-SNARE subcomplex in the whole 20S complex
Descriptor: Alpha-soluble NSF attachment protein, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:Huang, X, Sun, S, Wang, X, Fan, F, Zhou, Q, Sui, S.F.
Deposit date:2018-11-01
Release date:2019-04-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Mechanistic insights into the SNARE complex disassembly.
Sci Adv, 5, 2019
6J74
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BU of 6j74 by Molmil
Complex of GGTaseIII and full-length Ykt6
Descriptor: Geranylgeranyl transferase type-2 subunit beta, PHOSPHATE ION, Protein prenyltransferase alpha subunit repeat-containing protein 1, ...
Authors:Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S.
Deposit date:2019-01-16
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.212 Å)
Cite:Complex of GGTaseIII and full-length Ykt6
To Be Published
6J7F
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BU of 6j7f by Molmil
Complex of GGTaseIII, farnesyl-Ykt6 (C-terminal methylated), and GGPP
Descriptor: DIPHOSPHATE, FARNESYL, GERAN-8-YL GERAN, ...
Authors:Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S.
Deposit date:2019-01-18
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.883 Å)
Cite:Complex of GGTaseIII, farnesyl-Ykt6 (C-terminal methylated), and GGPP
To Be Published
2NUT
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BU of 2nut by Molmil
Crystal Structure of the human Sec23a/24a heterodimer, complexed with the SNARE protein Sec22b
Descriptor: Protein transport protein Sec23A, Protein transport protein Sec24A, Vesicle-trafficking protein SEC22b, ...
Authors:Mancias, J.D, Goldberg, J.
Deposit date:2006-11-09
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Transport Signal on Sec22 for Packaging into COPII-Coated Vesicles is a Conformational Epitope
Mol.Cell, 26, 2007
2NUP
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BU of 2nup by Molmil
Crystal Structure of the human Sec23a/24a heterodimer, complexed with the SNARE protein Sec22b
Descriptor: Protein transport protein Sec23A, Protein transport protein Sec24A, Vesicle-trafficking protein SEC22b, ...
Authors:Mancias, J.D, Goldberg, J.
Deposit date:2006-11-09
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Transport Signal on Sec22 for Packaging into COPII-Coated Vesicles is a Conformational Epitope
Mol.Cell, 26, 2007
6J7X
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BU of 6j7x by Molmil
Complex of GGTaseIII, farnesyl-Ykt6, and GGPP
Descriptor: FORMIC ACID, GERANYLGERANYL DIPHOSPHATE, Geranylgeranyl transferase type-2 subunit beta, ...
Authors:Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S.
Deposit date:2019-01-18
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Complex of GGTaseIII, farnesyl-Ykt6 (C-terminal methylated), and GGPP
To Be Published
3EGX
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BU of 3egx by Molmil
Crystal structure of the mammalian COPII-coat protein Sec23a/24a complexed with the SNARE protein Sec22b and bound to the transport signal sequence of the SNARE protein Bet1
Descriptor: 9-residue synthetic peptide from SNARE protein Bet1, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Goldberg, J, Mancias, J.D.
Deposit date:2008-09-11
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of cargo membrane protein discrimination by the human COPII coat machinery.
Embo J., 27, 2008
2N1T
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BU of 2n1t by Molmil
Dynamic binding mode of a synaptotagmin-1-SNARE complex in solution
Descriptor: Synaptosomal-associated protein 25, Synaptotagmin-1, Syntaxin-1A, ...
Authors:Brewer, K, Bacaj, T, Cavalli, A, Camilloni, C, Swarbrick, J, Liu, J, Zhou, A, Zhou, P, Barlow, N, Xu, J, Seven, A, Prinslow, E, Voleti, R, Haussinger, D, Bonvin, A, Tomchick, D, Vendruscolo, M, Graham, B, Sudhof, T, Rizo, J.
Deposit date:2015-04-21
Release date:2015-06-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Dynamic binding mode of a Synaptotagmin-1-SNARE complex in solution.
Nat.Struct.Mol.Biol., 22, 2015
3J99
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BU of 3j99 by Molmil
Structure of 20S supercomplex determined by single particle cryoelectron microscopy (State IIIb)
Descriptor: Alpha-soluble NSF attachment protein, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:Zhao, M, Wu, S, Cheng, Y, Brunger, A.T.
Deposit date:2014-12-05
Release date:2015-01-28
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Mechanistic insights into the recycling machine of the SNARE complex.
Nature, 518, 2015
3J96
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BU of 3j96 by Molmil
Structure of 20S supercomplex determined by single particle cryoelectron microscopy (State I)
Descriptor: Alpha-soluble NSF attachment protein, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:Zhao, M, Wu, S, Cheng, Y, Brunger, A.T.
Deposit date:2014-12-05
Release date:2015-01-28
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Mechanistic insights into the recycling machine of the SNARE complex.
Nature, 518, 2015
3J98
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BU of 3j98 by Molmil
Structure of 20S supercomplex determined by single particle cryoelectron microscopy (State IIIa)
Descriptor: Alpha-soluble NSF attachment protein, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:Zhao, M, Wu, S, Cheng, Y, Brunger, A.T.
Deposit date:2014-12-05
Release date:2015-01-28
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.4 Å)
Cite:Mechanistic insights into the recycling machine of the SNARE complex.
Nature, 518, 2015
3J97
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BU of 3j97 by Molmil
Structure of 20S supercomplex determined by single particle cryoelectron microscopy (State II)
Descriptor: Alpha-soluble NSF attachment protein, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:Zhao, M, Wu, S, Cheng, Y, Brunger, A.T.
Deposit date:2014-12-05
Release date:2015-01-28
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Mechanistic insights into the recycling machine of the SNARE complex.
Nature, 518, 2015
5VNM
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BU of 5vnm by Molmil
Crystal structure of Sec23a/Sec24a/Sec22 complexed with 4-phenylbutyric acid (15mM soaking)
Descriptor: 4-PHENYL-BUTANOIC ACID, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2017-04-30
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.765 Å)
Cite:ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017
5VNI
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BU of 5vni by Molmil
Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal FA sorting motif
Descriptor: C-terminal FA, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2017-04-30
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.788 Å)
Cite:ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017
5VNL
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BU of 5vnl by Molmil
Crystal structure of Sec23a/Sec24a/Sec22 complexed with 4-phenylbutyric acid (1mM soaking)
Descriptor: 4-PHENYL-BUTANOIC ACID, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2017-04-30
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.394 Å)
Cite:ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017
5VNK
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BU of 5vnk by Molmil
Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal LL sorting motif
Descriptor: C-terminal LL, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2017-04-30
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017

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