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PDB: 660 results

6IQQ
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BU of 6iqq by Molmil
Crystal structure of Prc with S452I and L252Y mutations in complex with NlpI
Descriptor: CALCIUM ION, Lipoprotein NlpI, Tail-specific protease
Authors:Chueh, C.K, Chang, C.I.
Deposit date:2018-11-08
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases.
Mbio, 10, 2019
6IQR
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BU of 6iqr by Molmil
Crystal structure of Prc with S452I and L252Y mutations
Descriptor: Tail-specific protease
Authors:Chueh, C.K, Chang, C.I.
Deposit date:2018-11-08
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases.
Mbio, 10, 2019
6IQS
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BU of 6iqs by Molmil
Crystal structure of Prc with L245A and L340G mutations in complex with NlpI
Descriptor: Lipoprotein NlpI, Tail-specific protease
Authors:Chuech, C.K, Chang, C.I.
Deposit date:2018-11-08
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases.
Mbio, 10, 2019
6JJL
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BU of 6jjl by Molmil
Crystal structure of the DegP dodecamer with a modulator
Descriptor: CYS-TYR-ARG-LYS-LEU, Periplasmic serine endoprotease DegP
Authors:Cho, H, Choi, Y, Lee, H.H, Kim, S.
Deposit date:2019-02-26
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy.
Commun Biol, 3, 2020
6JJK
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BU of 6jjk by Molmil
Crystal structure of the DegP dodecamer with a modulator
Descriptor: CYS-TYR-TYR-LYS-ILE, Periplasmic serine endoprotease DegP
Authors:Cho, H, Choi, Y, Lee, H.H, Kim, S.
Deposit date:2019-02-26
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy
Commun Biol, 3, 2020
6JJO
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BU of 6jjo by Molmil
Crystal structure of the DegP dodecamer with a modulator
Descriptor: Periplasmic serine endoprotease DegP, TMB-CYRKL modulator
Authors:Cho, H, Choi, Y, Lee, H.H, Kim, S.
Deposit date:2019-02-26
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (4.157 Å)
Cite:Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy
Commun Biol, 3, 2020
6IRD
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BU of 6ird by Molmil
Complex structure of INADL PDZ89 and PLCb4 C-terminal CC-PBM
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase, GOLD ION, InaD-like protein
Authors:Ye, F, Li, J, Huang, Y, Liu, W, Zhang, M.
Deposit date:2018-11-12
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.813 Å)
Cite:An unexpected INAD PDZ tandem-mediated plc beta binding in Drosophila photo receptors.
Elife, 7, 2018
1KY9
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BU of 1ky9 by Molmil
Crystal Structure of DegP (HtrA)
Descriptor: PROTEASE DO
Authors:Krojer, T, Garrido-Franco, M, Huber, R, Ehrmann, M, Clausen, T.
Deposit date:2002-02-04
Release date:2002-04-03
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of DegP (HtrA) reveals a new protease-chaperone machine.
Nature, 416, 2002
4QL6
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BU of 4ql6 by Molmil
Structure of C. trachomatis CT441
Descriptor: Carboxy-terminal processing protease
Authors:Kohlmann, F, Hilgenfeld, R, Hansen, G.
Deposit date:2014-06-10
Release date:2014-11-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Structural basis of the proteolytic and chaperone activity of Chlamydia trachomatis CT441
J.Bacteriol., 197, 2015
1P1D
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BU of 1p1d by Molmil
Structural Insights into the Inter-domain Chaperoning of Tandem PDZ Domains in Glutamate Receptor Interacting Proteins
Descriptor: Glutamate receptor interacting protein
Authors:Feng, W, Shi, Y, Li, M, Zhang, M.
Deposit date:2003-04-12
Release date:2003-11-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Tandem PDZ repeats in glutamate receptor-interacting proteins have a novel mode of PDZ domain-mediated target binding
Nat.Struct.Biol., 10, 2003
3TMH
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BU of 3tmh by Molmil
Crystal structure of dual-specific A-kinase anchoring protein 2 in complex with cAMP-dependent protein kinase A type II alpha and PDZK1
Descriptor: A-kinase anchor protein 10, mitochondrial, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, ...
Authors:Sarma, G.N, Phan, R.H, Sankaran, B, Taylor, S.S.
Deposit date:2011-08-31
Release date:2012-09-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Differential mode of D-AKAP2 to PKA isoforms: Insights from D-AKAP2 PKA RII PDZK1 ternary complex structure
To be Published
3TSZ
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BU of 3tsz by Molmil
crystal structure of PDZ3-SH3-GUK core module from human ZO-1 in complex with 12mer peptide from human JAM-A cytoplasmic tail
Descriptor: Junctional adhesion molecule A, Tight junction protein ZO-1
Authors:Nomme, J, Lavie, A.
Deposit date:2011-09-13
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:The Src Homology 3 Domain Is Required for Junctional Adhesion Molecule Binding to the Third PDZ Domain of the Scaffolding Protein ZO-1.
J.Biol.Chem., 286, 2011
3SHW
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BU of 3shw by Molmil
Crystal structure of ZO-1 PDZ3-SH3-Guk supramodule complex with Connexin-45 peptide
Descriptor: Gap junction gamma-1 protein, Tight junction protein ZO-1
Authors:Yu, J, Pan, L, Chen, J, Yu, H, Zhang, M.
Deposit date:2011-06-17
Release date:2011-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Structure of the PDZ3-SH3-GuK Tandem of ZO-1 Suggests a Supramodular Organization of the Conserved MAGUK Family Scaffold Core
To be Published
3STJ
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BU of 3stj by Molmil
Crystal structure of the protease + PDZ1 domain of DegQ from Escherichia coli
Descriptor: Protease degQ, peptide (UNK)
Authors:Sawa, J, Malet, H, Krojer, T, Canellas, F, Ehrmann, M, Clausen, T.
Deposit date:2011-07-11
Release date:2011-07-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular adaptation of the DegQ protease to exert protein quality control in the bacterial cell envelope.
J.Biol.Chem., 286, 2011
3SUZ
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BU of 3suz by Molmil
Crystal structure of Rat Mint2 PPC
Descriptor: Amyloid beta A4 precursor protein-binding family A member 2
Authors:Shen, Y, Long, J, Yan, X, Xie, X.
Deposit date:2011-07-11
Release date:2012-07-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Open-closed motion of Mint2 regulates APP metabolism
J Mol Cell Biol, 5, 2013
3TSW
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BU of 3tsw by Molmil
crystal structure of the PDZ3-SH3-GUK core module of Human ZO-1
Descriptor: SULFATE ION, Tight junction protein ZO-1
Authors:Nomme, J, Lavie, A.
Deposit date:2011-09-13
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.847 Å)
Cite:The Src Homology 3 Domain Is Required for Junctional Adhesion Molecule Binding to the Third PDZ Domain of the Scaffolding Protein ZO-1.
J.Biol.Chem., 286, 2011
4L8N
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BU of 4l8n by Molmil
Crystal structure of a PDZ domain protein (BDI_1242) from Parabacteroides distasonis ATCC 8503 at 2.50 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ETHANOL, MAGNESIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2013-06-17
Release date:2013-06-26
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a PDZ domain protein (BDI_1242) from Parabacteroides distasonis ATCC 8503 at 2.50 A resolution
To be published
4P2A
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BU of 4p2a by Molmil
Structure of mouse VPS26A bound to rat SNX27 PDZ domain
Descriptor: MERCURY (II) ION, Sorting nexin-27, Vacuolar protein sorting-associated protein 26A
Authors:Clairfeuille, T, Gallon, M, Mas, C, Ghai, R, Teasdale, R, Cullen, P, Collins, B.
Deposit date:2014-03-03
Release date:2014-09-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A unique PDZ domain and arrestin-like fold interaction reveals mechanistic details of endocytic recycling by SNX27-retromer.
Proc.Natl.Acad.Sci.USA, 111, 2014
1Z87
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BU of 1z87 by Molmil
solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin
Descriptor: Alpha-1-syntrophin
Authors:Yan, J, Xu, W, Wen, W, Long, J.F, Adams, M.E, Froehner, S.C, Zhang, M.
Deposit date:2005-03-30
Release date:2006-01-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the split PH domain and distinct lipid-binding properties of the PH-PDZ supramodule of alpha-syntrophin
Embo J., 24, 2005
2HGA
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BU of 2hga by Molmil
Solution NMR Structure of Conserved protein MTH1368, Northeast Structural Genomics Consortium Target TT821A
Descriptor: Conserved protein MTH1368
Authors:Liu, G, Lin, Y, Parish, D, Shen, Y, Sukumaran, D, Yee, A, Semesi, A, Arrowsmith, C, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-06-26
Release date:2006-07-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution NMR Structure of Conserved protein MTH1368, Northeast Structural Genomics Consortium Target TT821A
TO BE PUBLISHED
2KRG
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BU of 2krg by Molmil
Solution Structure of human sodium/ hydrogen exchange regulatory factor 1(150-358)
Descriptor: Na(+)/H(+) exchange regulatory cofactor NHE-RF1
Authors:Bhattacharya, S, Dai, Z, Li, J, Baxter, S, Callaway, D.J.E, Cowburn, D, Bu, Z.
Deposit date:2009-12-17
Release date:2009-12-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A conformational switch in the scaffolding protein NHERF1 controls autoinhibition and complex formation.
J.Biol.Chem., 285, 2010
8T1J
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BU of 8t1j by Molmil
Uncrosslinked nNOS-CaM oxygenase homodimer
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ARGININE, Nitric oxide synthase 1, ...
Authors:Lee, K, Pospiech, T.H, Southworth, D.
Deposit date:2023-06-02
Release date:2023-11-29
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Mapping interactions of calmodulin and neuronal NO synthase by crosslinking and mass spectrometry.
J.Biol.Chem., 300, 2023
8T1K
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BU of 8t1k by Molmil
DSBU crosslinked nNOS-CaM oxygenase homodimer
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ARGININE, Nitric oxide synthase 1, ...
Authors:Lee, K, Pospiech, T.H, Southworth, D.
Deposit date:2023-06-02
Release date:2023-11-29
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Mapping interactions of calmodulin and neuronal NO synthase by crosslinking and mass spectrometry.
J.Biol.Chem., 300, 2023
5XBF
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BU of 5xbf by Molmil
Crystal Structure of Myo7b C-terminal MyTH4-FERM in complex with USH1C PDZ3
Descriptor: ACETATE ION, D-MALATE, GLYCEROL, ...
Authors:Li, J, He, Y, Weck, W.L, Lu, Q, Tyska, M.J, Zhang, M.
Deposit date:2017-03-17
Release date:2017-05-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Structure of Myo7b/USH1C complex suggests a general PDZ domain binding mode by MyTH4-FERM myosins.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6EW9
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BU of 6ew9 by Molmil
CRYSTAL STRUCTURE OF DEGS STRESS SENSOR PROTEASE IN COMPLEX WITH ACTIVATING DNRLGLVYQF PEPTIDE
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, DNRLGLVYQF PEPTIDE, ...
Authors:Vetter, I.R, Porfetye, A.T, Stege, P.
Deposit date:2017-11-03
Release date:2018-04-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of Noncatalytic Lysine Residues from Allosteric Circuits via Covalent Probes.
ACS Chem. Biol., 13, 2018

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