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PDB: 541 results

7UFZ
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BU of 7ufz by Molmil
Crystal structure of TDP1 complexed with compound XZ768
Descriptor: (4-{[(4S)-2-phenylimidazo[1,2-a]pyridin-3-yl]amino}phenyl)phosphonic acid, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ...
Authors:Lountos, G.T, Zhao, X.Z, Wang, W, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R.
Deposit date:2022-03-23
Release date:2023-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.559 Å)
Cite:Phosphonic acid-containing inhibitors of tyrosyl-DNA phosphodiesterase 1.
Front Chem, 10, 2022
7UFY
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BU of 7ufy by Molmil
Crystal structure of TDP1 complexed with compound XZ766
Descriptor: 1,2-ETHANEDIOL, Tyrosyl-DNA phosphodiesterase 1, [(4-{[(4S)-2,7-diphenylimidazo[1,2-a]pyridin-3-yl]amino}phenyl)methyl]phosphonic acid
Authors:Lountos, G.T, Zhao, X.Z, Wang, W, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R.
Deposit date:2022-03-23
Release date:2023-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.584 Å)
Cite:Phosphonic acid-containing inhibitors of tyrosyl-DNA phosphodiesterase 1.
Front Chem, 10, 2022
7E1V
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BU of 7e1v by Molmil
Cryo-EM structure of apo hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, CARDIOLIPIN, ...
Authors:Zhou, S, Wang, W, Gao, Y, Gong, H, Rao, Z.
Deposit date:2021-02-03
Release date:2021-10-13
Last modified:2022-07-27
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structure of Mycobacterium tuberculosis cytochrome bcc in complex with Q203 and TB47, two anti-TB drug candidates.
Elife, 10, 2021
7E1X
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BU of 7e1x by Molmil
Cryo-EM structure of hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV in presence of TB47
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, 5-methoxy-2-methyl-~{N}-[[4-[4-[4-(trifluoromethyloxy)phenyl]piperidin-1-yl]phenyl]methyl]pyrazolo[1,5-a]pyridine-3-carboxamide, ...
Authors:Zhou, S, Wang, W, Gao, Y, Gong, H, Rao, Z.
Deposit date:2021-02-03
Release date:2021-10-27
Last modified:2022-07-27
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structure of Mycobacterium tuberculosis cytochrome bcc in complex with Q203 and TB47, two anti-TB drug candidates.
Elife, 10, 2021
7E1W
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BU of 7e1w by Molmil
Cryo-EM structure of hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV in the presence of Q203
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, 6-chloranyl-2-ethyl-N-[[4-[4-[4-(trifluoromethyloxy)phenyl]piperidin-1-yl]phenyl]methyl]imidazo[1,2-a]pyridine-3-carboxamide, ...
Authors:Zhou, S, Wang, W, Gao, Y, Gong, H, Rao, Z.
Deposit date:2021-02-03
Release date:2021-10-27
Last modified:2022-07-27
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:Structure of Mycobacterium tuberculosis cytochrome bcc in complex with Q203 and TB47, two anti-TB drug candidates.
Elife, 10, 2021
6ZRU
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BU of 6zru by Molmil
Crystal structure of SARS CoV2 main protease in complex with inhibitor Boceprevir
Descriptor: DIMETHYL SULFOXIDE, Main Protease, boceprevir (bound form)
Authors:Oerlemans, R, Wang, W, Lunev, S, Domling, A, Groves, M.R.
Deposit date:2020-07-14
Release date:2020-08-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Repurposing the HCV NS3-4A protease drug boceprevir as COVID-19 therapeutics.
Rsc Med Chem, 12, 2020
7CLU
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BU of 7clu by Molmil
PigF with SAH
Descriptor: ACETATE ION, GLYCEROL, Methyltransferase domain-containing protein
Authors:Qiu, S, Xu, D, Han, N, Sun, B, Ran, T, Wang, W.
Deposit date:2020-07-22
Release date:2021-07-28
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of PigF, an O-methyltransferase involved in the prodigiosin synthetic pathway, reveal an induced-fit substrate-recognition mechanism.
Iucrj, 9, 2022
7CK6
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BU of 7ck6 by Molmil
Protein translocase of mitochondria
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Mitochondrial import receptor subunit TOM22 homolog, Mitochondrial import receptor subunit TOM40 homolog, ...
Authors:Yang, M, Wang, W, Zhang, L, Chen, X.
Deposit date:2020-07-15
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Atomic structure of human TOM core complex.
Cell Discov, 6, 2020
8IKJ
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BU of 8ikj by Molmil
Cryo-EM structure of the inactive CD97
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Adhesion G protein-coupled receptor E5,Soluble cytochrome b562,Adhesion G protein-coupled receptor E5 subunit beta
Authors:Mao, C, Zhao, R, Dong, Y, Gao, M, Chen, L, Zhang, C, Xiao, P, Guo, J, Qin, J, Shen, D, Ji, S, Zang, S, Zhang, H, Wang, W, Shen, Q, Sun, P, Zhang, Y.
Deposit date:2023-02-28
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Conformational transitions and activation of the adhesion receptor CD97.
Mol.Cell, 84, 2024
1T70
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BU of 1t70 by Molmil
Crystal structure of a novel phosphatase from Deinococcus radiodurans
Descriptor: Phosphatase
Authors:Shin, D.H, Wang, W, Kim, R, Yokota, H, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-05-07
Release date:2004-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and enzymatic characterization of DR1281: A calcineurin-like phosphoesterase from Deinococcus radiodurans.
Proteins, 70, 2008
7WIG
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BU of 7wig by Molmil
Cryo-EM structure of the L-054,264-bound human SSTR2-Gi1 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Chen, L, Wang, W, Dong, Y, Shen, D, Guo, J, Qin, J, Zhang, H, Shen, Q, Zhang, Y, Mao, C.
Deposit date:2022-01-03
Release date:2022-06-01
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structures of the endogenous peptide- and selective non-peptide agonist-bound SSTR2 signaling complexes.
Cell Res., 32, 2022
7WIC
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BU of 7wic by Molmil
Cryo-EM structure of the SS-14-bound human SSTR2-Gi1 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Chen, L, Wang, W, Dong, Y, Shen, D, Guo, J, Qin, J, Zhang, H, Shen, Q, Zhang, Y, Mao, C.
Deposit date:2022-01-03
Release date:2022-06-01
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structures of the endogenous peptide- and selective non-peptide agonist-bound SSTR2 signaling complexes.
Cell Res., 32, 2022
7C91
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BU of 7c91 by Molmil
Blasnase-T13A with D-asn
Descriptor: D-ASPARAGINE, FORMIC ACID, L-asparaginase, ...
Authors:Lu, F, Ran, T, Jiao, L, Wang, W.
Deposit date:2020-06-04
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structures of l-asparaginase from Bacillus licheniformis Reveal an Essential Residue for its Substrate Stereoselectivity.
J.Agric.Food Chem., 69, 2021
7CBU
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BU of 7cbu by Molmil
Blasnase-T13A with L-Asp
Descriptor: ASPARTIC ACID, FORMIC ACID, L-asparaginase, ...
Authors:Lu, F, Ran, T, Jiao, L, Wang, W.
Deposit date:2020-06-14
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of l-asparaginase from Bacillus licheniformis Reveal an Essential Residue for its Substrate Stereoselectivity.
J.Agric.Food Chem., 69, 2021
7CB4
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BU of 7cb4 by Molmil
Crystal structures of of BlAsnase
Descriptor: FORMIC ACID, GLYCEROL, L-asparaginase, ...
Authors:Lu, F, Ran, T, Jiao, L, Wang, W.
Deposit date:2020-06-10
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structures of l-asparaginase from Bacillus licheniformis Reveal an Essential Residue for its Substrate Stereoselectivity.
J.Agric.Food Chem., 69, 2021
7C8X
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BU of 7c8x by Molmil
Blasnase-T13A with L-asn
Descriptor: ASPARAGINE, Asparaginase, FORMIC ACID, ...
Authors:Lu, F, Ran, T, Jiao, L, Wang, W.
Deposit date:2020-06-03
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:Structures of l-asparaginase from Bacillus licheniformis Reveal an Essential Residue for its Substrate Stereoselectivity.
J.Agric.Food Chem., 69, 2021
7CBR
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BU of 7cbr by Molmil
Blasnase-T13A with D-asn
Descriptor: D-ASPARAGINE, FORMIC ACID, L-asparaginase, ...
Authors:Lu, F, Ran, T, Jiao, L, Wang, W.
Deposit date:2020-06-13
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of l-asparaginase from Bacillus licheniformis Reveal an Essential Residue for its Substrate Stereoselectivity.
J.Agric.Food Chem., 69, 2021
7C8Q
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BU of 7c8q by Molmil
Blasnase-T13A with D-asn
Descriptor: Asparaginase, D-ASPARAGINE, FORMIC ACID, ...
Authors:Lu, F, Ran, T, Jiao, L, Wang, W.
Deposit date:2020-06-03
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structures of l-asparaginase from Bacillus licheniformis Reveal an Essential Residue for its Substrate Stereoselectivity.
J.Agric.Food Chem., 69, 2021
7CBW
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BU of 7cbw by Molmil
Blasnase-T13A with D-asn
Descriptor: FORMIC ACID, L-asparaginase, MAGNESIUM ION
Authors:Lu, F, Ran, T, Jiao, L, Wang, W.
Deposit date:2020-06-15
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Structures of l-asparaginase from Bacillus licheniformis Reveal an Essential Residue for its Substrate Stereoselectivity.
J.Agric.Food Chem., 69, 2021
7CDY
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BU of 7cdy by Molmil
Crystal structure of glucose dehydrogenase
Descriptor: CALCIUM ION, GLYCEROL, glucose dehydrogenase
Authors:Jia, S, Xu, D, Wang, W, Ran, T.
Deposit date:2020-06-21
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.329 Å)
Cite:Structure of glucose dehydrogenase at 1.33 Angstroms
To Be Published
7CGZ
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BU of 7cgz by Molmil
glucose dehydrogenase
Descriptor: CALCIUM ION, GLYCEROL, glucose dehydrogenase
Authors:Jia, S, Xu, D, Wang, W, Ran, T.
Deposit date:2020-07-03
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of glucose dehydrogenase at 1.33 Angstroms
To Be Published
7CLF
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BU of 7clf by Molmil
PigF with SAH
Descriptor: ACETATE ION, Methyltransferase domain-containing protein, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Qiu, S, Xu, D, Han, N, Sun, B, Ran, T, Wang, W.
Deposit date:2020-07-20
Release date:2021-07-28
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.982 Å)
Cite:Crystal structures of PigF, an O-methyltransferase involved in the prodigiosin synthetic pathway, reveal an induced-fit substrate-recognition mechanism.
Iucrj, 9, 2022
5DEW
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BU of 5dew by Molmil
Crystal structure of PAK1 in complex with an inhibitor compound 5
Descriptor: 8-[(trans-4-aminocyclohexyl)methyl]-6-[2-chloro-4-(6-methylpyrazin-2-yl)phenyl]-2-(ethylamino)pyrido[2,3-d]pyrimidin-7(8H)-one, Serine/threonine-protein kinase PAK 1
Authors:Oh, A, Tam, C, Wang, W.
Deposit date:2015-08-26
Release date:2016-09-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of Selective PAK1 Inhibitor G-5555: Improving Proper-ties by Employing an Unorthodox Low-pKa Polar Moiety
To Be Published
2LW3
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BU of 2lw3 by Molmil
Solution structure of the soluble domain of MmpS4 from Mycobacterium tuberculosis
Descriptor: Putative membrane protein mmpS4
Authors:Xi, Z, Sun, P, Wang, W, Lai, C, Wu, F, Tian, C.
Deposit date:2012-07-19
Release date:2013-03-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Discovery of a Siderophore Export System Essential for Virulence of Mycobacterium tuberculosis
Plos Pathog., 9, 2013
7VMU
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BU of 7vmu by Molmil
Crystal Structure of SARS-CoV Spike Receptor-Binding Domain Complexed with Neutralizing Antibody
Descriptor: Spike protein S1, scFv E4
Authors:Guo, Y, Wang, W, Jiao, P, Yang, H, Rao, Z, Cheng, G.
Deposit date:2021-10-09
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Antibody engineering improves neutralization activity against K417 spike mutant SARS-CoV-2 variants.
Cell Biosci, 12, 2022

225946

数据于2024-10-09公开中

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