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PDB: 654 results

7TBL
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BU of 7tbl by Molmil
Composite structure of the human nuclear pore complex (NPC) cytoplasmic face generated with a 12A cryo-ET map of the purified HeLa cell NPC
Descriptor: DDX19, ELYS, GLE1, ...
Authors:Bley, C.J, Nie, S, Mobbs, G.W, Petrovic, S, Gres, A.T, Liu, X, Mukherjee, S, Harvey, S, Huber, F.M, Lin, D.H, Brown, B, Tang, A.W, Rundlet, E.J, Correia, A.R, Chen, S, Regmi, S.G, Stevens, T.A, Jette, C.A, Dasso, M, Patke, A, Palazzo, A.F, Kossiakoff, A.A, Hoelz, A.
Deposit date:2021-12-22
Release date:2022-06-22
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (23 Å)
Cite:Architecture of the cytoplasmic face of the nuclear pore.
Science, 376, 2022
3CXQ
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BU of 3cxq by Molmil
Crystal structure of human glucosamine 6-phosphate N-acetyltransferase 1 bound to GlcN6P
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, Glucosamine 6-phosphate N-acetyltransferase
Authors:Wang, J, Liu, X, Li, L.-F, Su, X.-D.
Deposit date:2008-04-25
Release date:2008-09-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Acceptor substrate binding revealed by crystal structure of human glucosamine-6-phosphate N-acetyltransferase 1
Febs Lett., 582, 2008
3CXS
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BU of 3cxs by Molmil
Crystal structure of human GNA1
Descriptor: Glucosamine 6-phosphate N-acetyltransferase
Authors:Wang, J, Liu, X, Li, L.-F, Su, X.-D.
Deposit date:2008-04-25
Release date:2008-09-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Acceptor substrate binding revealed by crystal structure of human glucosamine-6-phosphate N-acetyltransferase 1
Febs Lett., 582, 2008
3EXS
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BU of 3exs by Molmil
Crystal structure of KGPDC from Streptococcus mutans in complex with D-R5P
Descriptor: RIBULOSE-5-PHOSPHATE, RmpD (Hexulose-6-phosphate synthase)
Authors:Li, G.L, Liu, X, Wang, K.T, Li, L.F, Su, X.D.
Deposit date:2008-10-17
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Open-closed conformational change revealed by the crystal structures of 3-keto-L-gulonate 6-phosphate decarboxylase from Streptococcus mutans
Biochem.Biophys.Res.Commun., 381, 2009
7YKS
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BU of 7yks by Molmil
Structure of TRPA1 in Drosophila melanogaster in a state with 5 ankyrin repeats determined
Descriptor: Transient receptor potential cation channel subfamily A member 1
Authors:Sun, L, Liu, X, Yang, Z, Wang, X.
Deposit date:2022-07-23
Release date:2023-07-26
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular architecture and gating mechanisms of the Drosophila TRPA1 channel.
Cell Discov, 9, 2023
7YKR
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BU of 7ykr by Molmil
Structure of TRPA1 in Drosophila melanogaster in a state with 17 ankyrin repeats determined
Descriptor: Transient receptor potential cation channel subfamily A member 1
Authors:Sun, L, Liu, X, Yang, Z, Wang, X.
Deposit date:2022-07-23
Release date:2023-07-26
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular architecture and gating mechanisms of the Drosophila TRPA1 channel.
Cell Discov, 9, 2023
7BZH
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BU of 7bzh by Molmil
Solution structure of a DNA binding protein from Sulfolobus islandicus
Descriptor: Sul7s
Authors:Zhang, Z, Liu, X.
Deposit date:2020-04-28
Release date:2021-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Novel Family of Winged-Helix Single-Stranded DNA-Binding Proteins from Archaea.
Int J Mol Sci, 23, 2022
5WTR
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BU of 5wtr by Molmil
Crystal structure of a prokaryotic TRIC channel in 0.5 M KCl
Descriptor: 1,2-ETHANEDIOL, POTASSIUM ION, TRISTEAROYLGLYCEROL, ...
Authors:Ou, X.M, Wang, L.F, Yang, H.T, Liu, X.Y, Liu, Z.F.
Deposit date:2016-12-14
Release date:2017-04-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ion and water binding sites inside an occluded hourglass pore of a TRIC channel
BMC BIOL., 2017
5BJS
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BU of 5bjs by Molmil
Apo ctPRC2 in an autoinhibited state
Descriptor: Histone-lysine N-methyltransferase EZH2, Polycomb protein SUZ12, Polycomb Protein EED, ...
Authors:Bratkowski, M.A, Liu, X.
Deposit date:2016-10-22
Release date:2017-06-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.189 Å)
Cite:Polycomb repressive complex 2 in an autoinhibited state.
J. Biol. Chem., 292, 2017
4BYG
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BU of 4byg by Molmil
ATPase crystal structure
Descriptor: COPPER EFFLUX ATPASE, MAGNESIUM ION, POLYETHYLENE GLYCOL (N=34), ...
Authors:Mattle, D, Drachmann, N.D, Liu, X.Y, Pedersen, B.P, Morth, J.P, Wang, J, Gourdon, P, Nissen, P.
Deposit date:2013-07-19
Release date:2014-08-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Dephosphorylation of Pib-Type Cu(I)-Atpases as Studied by Metallofluoride Complexes
To be Published
2YEW
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BU of 2yew by Molmil
Modeling Barmah Forest virus structural proteins
Descriptor: CAPSID PROTEIN, E1 ENVELOPE GLYCOPROTEIN, E2 ENVELOPE GLYCOPROTEIN
Authors:Kostyuchenko, V.A, Jakana, J, Liu, X, Haddow, A.D, Aung, M, Weaver, S.C, Chiu, W, Lok, S.M.
Deposit date:2011-03-31
Release date:2012-04-18
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (5 Å)
Cite:The Structure of Barmah Forest Virus as Revealed by Cryo-Electron Microscopy at a 6-Angstrom Resolution Has Detailed Transmembrane Protein Architecture and Interactions.
J.Virol., 85, 2011
4D3E
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BU of 4d3e by Molmil
Tetramer of IpaD, modified from 2J0O, fitted into negative stain electron microscopy reconstruction of the wild type tip complex from the type III secretion system of Shigella flexneri
Descriptor: INVASIN IPAD
Authors:Cheung, M, Shen, D.-K, Makino, F, Kato, T, Roehrich, D, Martinez-Argudo, I, Walker, M.L, Murillo, I, Liu, X, Pain, M, Brown, J, Frazer, G, Mantell, J, Mina, P, Todd, T, Sessions, R.B, Namba, K, Blocker, A.J.
Deposit date:2014-10-21
Release date:2014-12-10
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (24 Å)
Cite:Three-Dimensional Electron Microscopy Reconstruction and Cysteine-Mediated Crosslinking Provide a Model of the T3Ss Needle Tip Complex.
Mol.Microbiol., 95, 2015
4BEV
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BU of 4bev by Molmil
ATPase crystal structure with bound phosphate analogue
Descriptor: COPPER EFFLUX ATPASE, MAGNESIUM ION, TRIFLUOROMAGNESATE
Authors:Mattle, D, Drachmann, N.D, Liu, X.Y, Gourdon, P, Pedersen, B.P, Morth, P, Wang, J, Nissen, P.
Deposit date:2013-03-12
Release date:2014-04-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.583 Å)
Cite:ATPase Crystal Structure with Bound Phosphate Analogue
To be Published
3RFU
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BU of 3rfu by Molmil
Crystal structure of a copper-transporting PIB-type ATPase
Descriptor: Copper efflux ATPase, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Gourdon, P, Liu, X, Skjorringe, T, Morth, J.P, Birk Moller, L, Panyella Pedersen, B, Nissen, P.
Deposit date:2011-04-07
Release date:2011-06-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a copper-transporting PIB-type ATPase.
Nature, 475, 2011
8ACL
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BU of 8acl by Molmil
Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the non-covalent inhibitor GC-14
Descriptor: (2~{S})-1-(3,4-dichlorophenyl)-4-pyridin-3-ylcarbonyl-~{N}-(thiophen-2-ylmethyl)piperazine-2-carboxamide, 3C-like proteinase nsp5
Authors:Strater, N, Muller, C, Sylvester, K, Claff, T, Weisse, R.H, Gao, S, Tollefson, A.E, Liu, X, Zhan, P.
Deposit date:2022-07-05
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Discovery and Crystallographic Studies of Trisubstituted Piperazine Derivatives as Non-Covalent SARS-CoV-2 Main Protease Inhibitors with High Target Specificity and Low Toxicity.
J.Med.Chem., 65, 2022
8ACD
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BU of 8acd by Molmil
Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the non-covalent inhibitor GA-17S
Descriptor: (2~{S})-4-[[2,4-bis(oxidanylidene)-1~{H}-pyrimidin-6-yl]carbonyl]-1-(3,4-dichlorophenyl)-~{N}-(thiophen-2-ylmethyl)piperazine-2-carboxamide, 3C-like proteinase nsp5
Authors:Strater, N, Muller, C.E, Sylvester, K, Claff, T, Weisse, R.H, Gao, S, Tollefson, A.E, Liu, X, Zhan, P.
Deposit date:2022-07-05
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Discovery and Crystallographic Studies of Trisubstituted Piperazine Derivatives as Non-Covalent SARS-CoV-2 Main Protease Inhibitors with High Target Specificity and Low Toxicity.
J.Med.Chem., 65, 2022
3WB8
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BU of 3wb8 by Molmil
Crystal Structure of MyoVa-GTD
Descriptor: 1,2-ETHANEDIOL, Unconventional myosin-Va
Authors:Wei, Z, Liu, X, Yu, C, Zhang, M.
Deposit date:2013-05-13
Release date:2013-07-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Structural basis of cargo recognitions for class V myosins
Proc.Natl.Acad.Sci.USA, 110, 2013
5H4R
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BU of 5h4r by Molmil
the complex of Glycoside Hydrolase 5 Lichenase from Caldicellulosiruptor sp. F32 E188Q mutant and cellotetraose
Descriptor: Beta-1,3-1,4-glucanase, GLYCEROL, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Dong, S, Zhou, H, Liu, X, Wang, X, Feng, Y.
Deposit date:2016-11-02
Release date:2017-09-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.70310438 Å)
Cite:Structural insights into the substrate specificity of a glycoside hydrolase family 5 lichenase from Caldicellulosiruptor sp. F32
Biochem. J., 474, 2017
3DBQ
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BU of 3dbq by Molmil
Crystal structure of TTK kinase domain
Descriptor: Dual specificity protein kinase TTK
Authors:Wang, W, Yang, Y.T, Gao, Y.F, Zhu, S.C, Wang, F, Old, W, Xu, Q.B, Resing, K, Ahn, N, Lei, M, Liu, X.D.
Deposit date:2008-06-02
Release date:2009-02-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Mechanistic Insights into Mps1 Kinase Activation
J.CELL.MOL.MED., 13, 2008
6A6O
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BU of 6a6o by Molmil
Crystal structure of acetyl ester-xyloside bifunctional hydrolase from Caldicellulosiruptor lactoaceticus
Descriptor: Esterase/lipase-like protein
Authors:Cao, H, Huang, Y, Sun, L.C, Liu, X, Liu, T.F, Wang, F.Z, Xin, F.J.
Deposit date:2018-06-28
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insights into the Dual-Substrate Recognition and Catalytic Mechanisms of a Bifunctional Acetyl Ester-Xyloside Hydrolase from Caldicellulosiruptor lactoaceticus.
Acs Catalysis, 9, 2019
3V69
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BU of 3v69 by Molmil
Filia-N crystal structure
Descriptor: Protein Filia
Authors:Wang, J, Xu, M, Zhu, K, Li, L, Liu, X.
Deposit date:2011-12-19
Release date:2012-02-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-terminus of FILIA Forms an Atypical KH Domain with a Unique Extension Involved in Interaction with RNA.
Plos One, 7, 2012
5EU8
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BU of 5eu8 by Molmil
Structure of FIPV main protease in complex with dual inhibitors
Descriptor: 1,2-ETHANEDIOL, N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE, ZINC ION, ...
Authors:Wang, F, Chen, C, Liu, X, Yang, K, Xu, X, Yang, H.
Deposit date:2015-11-18
Release date:2015-12-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.447 Å)
Cite:Crystal Structure of Feline Infectious Peritonitis Virus Main Protease in Complex with Synergetic Dual Inhibitors
J.Virol., 90, 2015
6JKM
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BU of 6jkm by Molmil
Crystal structure of BubR1 kinase domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Lin, L, Ye, S, Huang, Y, Liu, X, Zhang, R, Yao, X.
Deposit date:2019-03-01
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:BubR1 phosphorylates CENP-E as a switch enabling the transition from lateral association to end-on capture of spindle microtubules.
Cell Res., 29, 2019
6JKK
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BU of 6jkk by Molmil
Crystal structure of BubR1 kinase domain
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Mitotic checkpoint control protein kinase BUB1
Authors:Lin, L, Ye, S, Huang, Y, Liu, X, Zhang, R, Yao, X.
Deposit date:2019-03-01
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:BubR1 phosphorylates CENP-E as a switch enabling the transition from lateral association to end-on capture of spindle microtubules.
Cell Res., 29, 2019
5ZHP
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BU of 5zhp by Molmil
M3 muscarinic acetylcholine receptor in complex with a selective antagonist
Descriptor: (1R,2R,4S,5S,7s)-7-({[4-fluoro-2-(thiophen-2-yl)phenyl]carbamoyl}oxy)-9,9-dimethyl-3-oxa-9-azatricyclo[3.3.1.0~2,4~]nonan-9-ium, CITRIC ACID, HEXAETHYLENE GLYCOL, ...
Authors:Liu, H, Hofmann, J, Fish, I, Schaake, B, Eitel, K, Bartuschat, A, Kaindl, J, Rampp, H, Banerjee, A, Hubner, H, Clark, M.J, Vincent, S.G, Fisher, J, Heinrich, M, Hirata, K, Liu, X, Sunahara, R.K, Shoichet, B.K, Kobilka, B.K, Gmeiner, P.
Deposit date:2018-03-13
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-guided development of selective M3 muscarinic acetylcholine receptor antagonists
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

224572

數據於2024-09-04公開中

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