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PDB: 650 results

5HRA
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BU of 5hra by Molmil
Crystal structure of an aspartate/glutamate racemase in complex with D-aspartate
Descriptor: D-ASPARTIC ACID, aspartate/glutamate racemase
Authors:Liu, X, Gao, F, Ma, Y, Liu, S, Cui, Y, Yuan, Z, Kang, X.
Deposit date:2016-01-23
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.597 Å)
Cite:Crystal structure and molecular mechanism of an aspartate/glutamate racemase from Escherichia coli O157
Febs Lett., 590, 2016
6OBA
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BU of 6oba by Molmil
The beta2 adrenergic receptor bound to a negative allosteric modulator
Descriptor: (2S)-1-[(1-methylethyl)amino]-3-(2-prop-2-en-1-ylphenoxy)propan-2-ol, 6-bromo-N~2~-phenylquinazoline-2,4-diamine, Beta-2 adrenergic receptor,Lysozyme,Beta-2 adrenergic receptor, ...
Authors:Liu, X, Stobel, A, Kaindl, J, Dengler, D, ClarK, M, Mahoney, J, Korczynska, M, Matt, R.A, Hubner, H, Xu, X, Stanek, M, Hirata, K, Shoichet, B, Sunahara, R, Gmeiner, R, Kobilka, B.K.
Deposit date:2019-03-20
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:An allosteric modulator binds to a conformational hub in the beta2adrenergic receptor.
Nat.Chem.Biol., 16, 2020
5HQT
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BU of 5hqt by Molmil
Crystal structure of an aspartate/glutamate racemase from Escherichia coli O157
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, aspartate/glutamate racemase
Authors:Liu, X, Gao, F, Ma, Y, Liu, S, Cui, Y, Yuan, Z, Kang, X.
Deposit date:2016-01-22
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Crystal structure and molecular mechanism of an aspartate/glutamate racemase from Escherichia coli O157
Febs Lett., 590, 2016
5HRC
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BU of 5hrc by Molmil
Crystal structure of an aspartate/glutamate racemase in complex with L-aspartate
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ASPARTIC ACID, aspartate/glutamate racemase
Authors:Liu, X, Gao, F, Ma, Y, Liu, S, Cui, Y, Yuan, Z, Kang, X.
Deposit date:2016-01-23
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.765 Å)
Cite:Crystal structure and molecular mechanism of an aspartate/glutamate racemase from Escherichia coli O157
Febs Lett., 590, 2016
6X6D
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BU of 6x6d by Molmil
Glucocorticoid Receptor DNA binding domain in complex with unmodified precursor for a modern recognition element (pre-GBS)
Descriptor: CACODYLATE ION, DNA (5'-D(*CP*CP*AP*GP*AP*AP*CP*GP*GP*AP*GP*CP*GP*TP*TP*CP*TP*G)-3'), DNA (5'-D(*TP*CP*AP*GP*AP*AP*CP*GP*CP*TP*CP*CP*GP*TP*TP*CP*TP*G)-3'), ...
Authors:Liu, X, Ortlund, E.A.
Deposit date:2020-05-28
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural basis for glucocorticoid receptor recognition of both unmodified and methylated binding sites, precursors of a modern recognition element.
Nucleic Acids Res., 49, 2021
5GWM
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BU of 5gwm by Molmil
Solution structure of heterodimeric coiled-coil domain of Drosophila GABAB receptor 1 and 3
Descriptor: Metabotropic GABA-B receptor subtype 1, Metabotropic GABA-B receptor subtype 3, isoform A
Authors:Liu, X, Zhang, S, Zhang, C.X, Liu, J.
Deposit date:2016-09-12
Release date:2017-09-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of heterodimeric coiled-coil domain of Drosophila GABAB receptor 1 and 3
To Be Published
6NWL
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BU of 6nwl by Molmil
Structure of the Ancestral Glucocorticoid Receptor 2 ligand binding domain in complex with hydrocortisone and PGC1a coregulator fragment
Descriptor: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Liu, X, Ortlund, E.A.
Deposit date:2019-02-06
Release date:2019-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.595 Å)
Cite:First High-Resolution Crystal Structures of the Glucocorticoid Receptor Ligand-Binding Domain-Peroxisome Proliferator-ActivatedgammaCoactivator 1-alphaComplex with Endogenous and Synthetic Glucocorticoids.
Mol.Pharmacol., 96, 2019
6NWK
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BU of 6nwk by Molmil
Structure of the Ancestral Glucocorticoid Receptor 2 ligand binding domain in complex with dexamethasone and PGC1a coregulator fragment
Descriptor: ACETYL GROUP, DEXAMETHASONE, DIMETHYL SULFOXIDE, ...
Authors:Liu, X, Ortlund, E.A.
Deposit date:2019-02-06
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:First High-Resolution Crystal Structures of the Glucocorticoid Receptor Ligand-Binding Domain-Peroxisome Proliferator-ActivatedgammaCoactivator 1-alphaComplex with Endogenous and Synthetic Glucocorticoids.
Mol.Pharmacol., 96, 2019
1LNU
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BU of 1lnu by Molmil
CRYSTAL STRUCTURE OF CLASS II MHC MOLECULE IAb BOUND TO EALPHA3K PEPTIDE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, H-2 class II histocompatibility antigen, A beta chain, ...
Authors:Liu, X, Dai, S, Crawford, F, Fruge, R, Marrack, P, Kappler, J.
Deposit date:2002-05-03
Release date:2002-08-14
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Alternate interactions define the binding of peptides to the MHC molecule IA(b).
Proc.Natl.Acad.Sci.USA, 99, 2002
5Y3X
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BU of 5y3x by Molmil
Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis
Descriptor: Beta-xylanase
Authors:Liu, X, Sun, L.C, Zhang, Y.B, Liu, T.F, Xin, F.J.
Deposit date:2017-07-31
Release date:2017-12-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights into the Thermophilic Adaption Mechanism of Endo-1,4-beta-Xylanase from Caldicellulosiruptor owensensis.
J. Agric. Food Chem., 66, 2018
5XMZ
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BU of 5xmz by Molmil
Verticillium effector PevD1
Descriptor: CALCIUM ION, CHLORIDE ION, Effector protein PevD1
Authors:Liu, X, Zhou, R.
Deposit date:2017-05-17
Release date:2017-07-05
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The asparagine-rich protein NRP interacts with the Verticillium effector PevD1 and regulates the subcellular localization of cryptochrome 2
J. Exp. Bot., 68, 2017
4YR8
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BU of 4yr8 by Molmil
Crystal structure of JNK in complex with a regulator protein
Descriptor: CHLORIDE ION, Dual specificity protein phosphatase 16, Mitogen-activated protein kinase 8
Authors:Liu, X, Wang, J, Wu, J.W, Wang, Z.X.
Deposit date:2015-03-14
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A conserved motif in JNK/p38-specific MAPK phosphatases as a determinant for JNK1 recognition and inactivation.
Nat Commun, 7, 2016
3QOF
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BU of 3qof by Molmil
Crystal structure of the cytosolic domain of human atlastin-1 in complex with GDP, orthorhombic form
Descriptor: Atlastin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Liu, X.
Deposit date:2011-02-09
Release date:2011-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Structures of the atlastin GTPase provide insight into homotypic fusion of endoplasmic reticulum membranes.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QNU
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BU of 3qnu by Molmil
Crystal structure of the cytosolic domain of human atlastin-1 in complex with GDP, hexagonal form
Descriptor: Atlastin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Liu, X.
Deposit date:2011-02-09
Release date:2011-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of the atlastin GTPase provide insight into homotypic fusion of endoplasmic reticulum membranes.
Proc.Natl.Acad.Sci.USA, 108, 2011
6LU7
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BU of 6lu7 by Molmil
The crystal structure of COVID-19 main protease in complex with an inhibitor N3
Descriptor: 3C-like proteinase, N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
Authors:Liu, X, Zhang, B, Jin, Z, Yang, H, Rao, Z.
Deposit date:2020-01-26
Release date:2020-02-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structure of Mprofrom SARS-CoV-2 and discovery of its inhibitors.
Nature, 582, 2020
2YXP
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BU of 2yxp by Molmil
The Effect of Deuteration on Protein Structure A High Resolution Comparison of Hydrogenous and Perdeuterated Haloalkane Dehalogenase
Descriptor: Haloalkane dehalogenase
Authors:Liu, X, Hanson, L, Langan, P, Viola, R.E.
Deposit date:2007-04-27
Release date:2007-09-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The effect of deuteration on protein structure: a high-resolution comparison of hydrogenous and perdeuterated haloalkane dehalogenase.
Acta Crystallogr.,Sect.D, 63, 2007
6EXV
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BU of 6exv by Molmil
Structure of mammalian RNA polymerase II elongation complex inhibited by Alpha-amanitin
Descriptor: AMATOXIN, DNA (25-MER), DNA (36-MER), ...
Authors:Liu, X, Farnung, L, Wigge, C, Cramer, P.
Deposit date:2017-11-09
Release date:2018-03-21
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of a mammalian RNA polymerase II elongation complex inhibited by alpha-amanitin.
J. Biol. Chem., 293, 2018
1PQ0
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BU of 1pq0 by Molmil
Crystal structure of mouse Bcl-xl
Descriptor: Apoptosis regulator Bcl-X
Authors:Liu, X, Dai, S, Zhu, Y, Marrack, P, Kappler, J.W.
Deposit date:2003-06-17
Release date:2003-09-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of a Bcl-xl/Bim fragment complex: Implications for Bim function
Immunity, 19, 2003
1PQ1
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BU of 1pq1 by Molmil
Crystal structure of Bcl-xl/Bim
Descriptor: Apoptosis regulator Bcl-X, BCL2-like protein 11
Authors:Liu, X, Dai, S, Zhu, Y, Marrack, P, Kappler, J.W.
Deposit date:2003-06-17
Release date:2003-09-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The structure of a Bcl-xl/Bim fragment complex: Implications for Bim function
Immunity, 19, 2003
3L78
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BU of 3l78 by Molmil
The crystal structure of SMU.1142C from Streptococcus mutans UA159
Descriptor: Regulatory protein spx
Authors:Liu, X, Fu, T.M, Su, X.-D.
Deposit date:2009-12-28
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of SMU.1142c from Streptococcus mutans UA159
To be Published
6AE9
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BU of 6ae9 by Molmil
X-ray structure of the photosystem II phosphatase PBCP
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Liu, X.Y, Chai, J.C, Ou, X.M, Liu, Z.F.
Deposit date:2018-08-03
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural Insights into Substrate Selectivity, Catalytic Mechanism, and Redox Regulation of Rice Photosystem II Core Phosphatase.
Mol Plant, 12, 2019
7MYN
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BU of 7myn by Molmil
Cryo-EM Structure of p110alpha in complex with p85alpha
Descriptor: Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Liu, X, Yang, S, Hart, J.R, Xu, Y, Zou, X, Zhang, H, Zhou, Q, Xia, T, Zhang, Y, Yang, D, Wang, M.-W, Vogt, P.K.
Deposit date:2021-05-21
Release date:2021-11-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Cryo-EM structures of PI3K alpha reveal conformational changes during inhibition and activation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MYO
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BU of 7myo by Molmil
Cryo-EM structure of p110alpha in complex with p85alpha inhibited by BYL-719
Descriptor: (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Liu, X, Yang, S, Hart, J.R, Xu, Y, Zou, X, Zhang, H, Zhou, Q, Xia, T, Zhang, Y, Yang, D, Wang, M.-W, Vogt, P.K.
Deposit date:2021-05-21
Release date:2021-11-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Cryo-EM structures of PI3K alpha reveal conformational changes during inhibition and activation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7BQY
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BU of 7bqy by Molmil
THE CRYSTAL STRUCTURE OF COVID-19 MAIN PROTEASE IN COMPLEX WITH AN INHIBITOR N3 at 1.7 angstrom
Descriptor: 3C-like proteinase, N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
Authors:Liu, X, Zhang, B, Jin, Z, Yang, H, Rao, Z.
Deposit date:2020-03-26
Release date:2020-04-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of Mprofrom SARS-CoV-2 and discovery of its inhibitors.
Nature, 582, 2020
8Z38
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BU of 8z38 by Molmil
FK506 binding protein 1B (including FK506)
Descriptor: 6-CARBOXYPIPERIDINE, peptidylprolyl isomerase
Authors:Liu, X.H, Zhao, W.H.
Deposit date:2024-04-14
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:High-resolution cocrystallized crystal structures of FK506 and FK506-binding proteins
To Be Published

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