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PDB: 667 results

4QY2
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Structure of H10 from human-infecting H10N8 virus in complex with human receptor analog
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetyl-alpha-neuraminic acid, hemagglutinin
Authors:Wang, M, Zhang, W, Qi, J, Wang, F, Zhou, J, Bi, Y, Wu, Y, Sun, H, Liu, J, Huang, C, Li, X, Yan, J, Shu, Y, Shi, Y, Gao, G.F.
Deposit date:2014-07-23
Release date:2015-01-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structural basis for preferential avian receptor binding by the human-infecting H10N8 avian influenza virus
Nat Commun, 6, 2015
4QY1
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Structure of H10 from human-infecting H10N8 in complex with avian receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, M, Zhang, W, Qi, J, Wang, F, Zhou, J, Bi, Y, Wu, Y, Sun, H, Liu, J, Huang, C, Li, X, Yan, J, Shu, Y, Shi, Y, Gao, G.F.
Deposit date:2014-07-23
Release date:2015-01-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.594 Å)
Cite:Structural basis for preferential avian receptor binding by the human-infecting H10N8 avian influenza virus
Nat Commun, 6, 2015
4RFP
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Crystal structure of a acidic PLA2 from Trimeresurus stejnegeri venom
Descriptor: Acidic phospholipase A2 5, DI(HYDROXYETHYL)ETHER
Authors:Zeng, F, Niu, L, Li, X, Teng, M.
Deposit date:2014-09-26
Release date:2014-10-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a acidic PLA2 from Trimeresurus stejnegeri venom
To be Published
2G5T
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BU of 2g5t by Molmil
Crystal structure of human dipeptidyl peptidase IV (DPPIV) complexed with cyanopyrrolidine (C5-pro-pro) inhibitor 21ag
Descriptor: 3-{[(2R,5S)-5-{[(2S)-2-(AMINOMETHYL)PYRROLIDIN-1-YL]CARBONYL}PYRROLIDIN-2-YL]METHOXY}-4-CHLOROBENZOIC ACID, Dipeptidyl peptidase 4
Authors:Longenecker, K.L, Fry, E.H, Lake, M.R, Solomon, L.R, Pei, Z, Li, X.
Deposit date:2006-02-23
Release date:2006-07-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery, structure-activity relationship, and pharmacological evaluation of (5-substituted-pyrrolidinyl-2-carbonyl)-2-cyanopyrrolidines as potent dipeptidyl peptidase IV inhibitors.
J.Med.Chem., 49, 2006
6BK8
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S. cerevisiae spliceosomal post-catalytic P complex
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, Lea1, ...
Authors:Liu, S, Li, X, Zhou, Z.H, Zhao, R.
Deposit date:2017-11-07
Release date:2018-02-21
Last modified:2020-10-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the yeast spliceosomal postcatalytic P complex.
Science, 358, 2017
2GO4
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BU of 2go4 by Molmil
Crystal structure of Aquifex aeolicus LpxC complexed with TU-514
Descriptor: 1,5-ANHYDRO-2-C-(CARBOXYMETHYL-N-HYDROXYAMIDE)-2-DEOXY-3-O-MYRISTOYL-D-GLUCITOL, CHLORIDE ION, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ...
Authors:Gennadios, H.A, Whittington, D.A, Li, X, Fierke, C.A, Christianson, D.W.
Deposit date:2006-04-12
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanistic Inferences from the Binding of Ligands to LpxC, a Metal-Dependent Deacetylase
Biochemistry, 45, 2006
2G63
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Crystal structure of human dipeptidyl peptidase IV (DPPIV) complexed with cyanopyrrolidine (C5-pro-pro) inhibitor 24b
Descriptor: Dipeptidyl peptidase 4, METHYL 4-{[({[(2R,5S)-5-{[(2S)-2-(AMINOMETHYL)PYRROLIDIN-1-YL]CARBONYL}PYRROLIDIN-2-YL]METHYL}AMINO)CARBONYL]AMINO}BENZOATE
Authors:Longenecker, K.L, Fry, E.H, Lake, M.R, Solomon, L.R, Pei, Z, Li, X.
Deposit date:2006-02-24
Release date:2006-07-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery, structure-activity relationship, and pharmacological evaluation of (5-substituted-pyrrolidinyl-2-carbonyl)-2-cyanopyrrolidines as potent dipeptidyl peptidase IV inhibitors.
J.Med.Chem., 49, 2006
3HVN
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BU of 3hvn by Molmil
Crystal structure of cytotoxin protein suilysin from Streptococcus suis
Descriptor: 1,1,1,3,3,3-hexafluoropropan-2-ol, HEPTANE-1,2,3-TRIOL, Hemolysin
Authors:Xu, L, Huang, B, Du, H, Zhang, C.X, Xu, J, Li, X, Rao, Z.
Deposit date:2009-06-16
Release date:2010-03-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.852 Å)
Cite:Crystal structure of cytotoxin protein suilysin from Streptococcus suis.
Protein Cell, 1, 2010
6C9U
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Crystal structure of [KS3][AT3] didomain from module 3 of 6-deoxyerthronolide B synthase in complex with antibody fragment (Fab)
Descriptor: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4, Heavy chain of Fab 1B2, ...
Authors:Deis, L.N, Li, X, Mathews, I.I, Khosla, C.
Deposit date:2018-01-28
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structure-Function Analysis of the Extended Conformation of a Polyketide Synthase Module.
J. Am. Chem. Soc., 140, 2018
4TVV
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Crystal structure of LppA from Legionella pneumophila
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Weber, S, Stirnimann, C, Wieser, M, Meier, R, Engelhardt, S, Li, X, Capitani, G, Kammerer, R, Hilbi, H.
Deposit date:2014-06-28
Release date:2014-11-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A Type IV Translocated Legionella Cysteine Phytase Counteracts Intracellular Growth Restriction by Phytate.
J.Biol.Chem., 289, 2014
2G5P
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BU of 2g5p by Molmil
Crystal structure of human dipeptidyl peptidase IV (DPPIV) complexed with cyanopyrrolidine (C5-pro-pro) inhibitor 21ac
Descriptor: 4-{[(2R,5S)-5-{[(2S)-2-(AMINOMETHYL)PYRROLIDIN-1-YL]CARBONYL}PYRROLIDIN-2-YL]METHOXY}-3-TERT-BUTYLBENZOIC ACID, Dipeptidyl peptidase 4
Authors:Longenecker, K.L, Fry, E.H, Lake, M.R, Solomon, L.R, Pei, Z, Li, X.
Deposit date:2006-02-23
Release date:2006-07-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery, structure-activity relationship, and pharmacological evaluation of (5-substituted-pyrrolidinyl-2-carbonyl)-2-cyanopyrrolidines as potent dipeptidyl peptidase IV inhibitors.
J.Med.Chem., 49, 2006
2K3C
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BU of 2k3c by Molmil
Structural and Functional Characterization of TM IX of the NHE1 Isoform of the Na+/H+ Exchanger
Descriptor: TMIX peptide
Authors:Reddy, T, Ding, J, Li, X, Sykes, B.D, Fliegel, L, Rainey, J.K.
Deposit date:2008-05-01
Release date:2008-06-03
Last modified:2020-02-19
Method:SOLUTION NMR
Cite:Structural and Functional Characterization of Transmembrane Segment IX of the NHE1 Isoform of the Na+/H+ Exchanger.
J.Biol.Chem., 283, 2008
2GO3
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BU of 2go3 by Molmil
Crystal structure of Aquifex aeolicus LpxC complexed with imidazole.
Descriptor: CHLORIDE ION, GLYCEROL, IMIDAZOLE, ...
Authors:Gennadios, H.A, Whittington, D.A, Li, X, Fierke, C.A, Christianson, D.W.
Deposit date:2006-04-12
Release date:2006-07-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanistic Inferences from the Binding of Ligands to LpxC, a Metal-Dependent Deacetylase
Biochemistry, 45, 2006
6KJ3
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BU of 6kj3 by Molmil
120kV MicroED structure of FUS (37-42) SYSGYS solved from merged datasets at 0.60 A
Descriptor: RNA-binding protein FUS
Authors:Zhou, H, Luo, F, Luo, Z, Li, D, Liu, C, Li, X.
Deposit date:2019-07-20
Release date:2019-10-02
Last modified:2024-03-27
Method:ELECTRON CRYSTALLOGRAPHY (0.6 Å)
Cite:Programming Conventional Electron Microscopes for Solving Ultrahigh-Resolution Structures of Small and Macro-Molecules.
Anal.Chem., 91, 2019
6KG7
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BU of 6kg7 by Molmil
Cryo-EM Structure of the Mammalian Tactile Channel Piezo2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Piezo-type mechanosensitive ion channel component 2
Authors:Wang, L, Zhou, H, Zhang, M, Liu, W, Deng, T, Zhao, Q, Li, Y, Lei, J, Li, X, Xiao, B.
Deposit date:2019-07-11
Release date:2019-09-04
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and mechanogating of the mammalian tactile channel PIEZO2.
Nature, 573, 2019
6E7P
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BU of 6e7p by Molmil
cryo-EM structure of human TRPML1 with PI35P2
Descriptor: (1R,2S,3S,4R,5S,6R)-5-{[(R)-[(2R)-2,3-bis{[(1S)-1-hydroxyoctyl]oxy}propoxy](hydroxy)phosphoryl]oxy}-2,4,6-trihydroxycyclohexane-1,3-diyl bis[dihydrogen (phosphate)], Mucolipin-1
Authors:Schmiege, P, Li, X.
Deposit date:2018-07-27
Release date:2018-11-28
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis for PtdInsP2-mediated human TRPML1 regulation.
Nat Commun, 9, 2018
6E7Y
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BU of 6e7y by Molmil
cryo-EM structure of human TRPML1 with PI45P2
Descriptor: Mucolipin-1, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Schmiege, P, Li, X.
Deposit date:2018-07-27
Release date:2018-11-28
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Structural basis for PtdInsP2-mediated human TRPML1 regulation.
Nat Commun, 9, 2018
6E7Z
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cryo-EM structure of human TRPML1 with ML-SA1 and PI35P2
Descriptor: (1R,2S,3S,4R,5S,6R)-5-{[(R)-[(2R)-2,3-bis{[(1S)-1-hydroxyoctyl]oxy}propoxy](hydroxy)phosphoryl]oxy}-2,4,6-trihydroxycyclohexane-1,3-diyl bis[dihydrogen (phosphate)], 2-{2-oxo-2-[(4S)-2,2,4-trimethyl-3,4-dihydroquinolin-1(2H)-yl]ethyl}-1H-isoindole-1,3(2H)-dione, Mucolipin-1
Authors:Schmiege, P, Li, X.
Deposit date:2018-07-27
Release date:2018-11-28
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Structural basis for PtdInsP2-mediated human TRPML1 regulation.
Nat Commun, 9, 2018
2I78
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Crystal structure of human dipeptidyl peptidase IV (DPP IV) complexed with ABT-341, a cyclohexene-constrained phenethylamine inhibitor
Descriptor: (1S,6R)-3-{[3-(TRIFLUOROMETHYL)-5,6-DIHYDRO[1,2,4]TRIAZOLO[4,3-A]PYRAZIN-7(8H)-YL]CARBONYL}-6-(2,4,5-TRIFLUOROPHENYL)CYCLOHEX-3-EN-1-AMINE, Dipeptidyl peptidase IV
Authors:Longenecker, K.L, Pei, Z, Li, X.
Deposit date:2006-08-30
Release date:2007-10-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of Cyclohexene-constrained Phenethylamine ABT-341, a Highly Potent, Selective, Orally Bioavailable, Safe and Potential Next-generation Dipeptidyl Peptidase IV Inhibitor for the Treatment of Type 2 Diabetes
To be Published
1C9W
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BU of 1c9w by Molmil
CHO REDUCTASE WITH NADP+
Descriptor: CHO REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ye, Q, Li, X, Hyndman, D, Flynn, T.G, Jia, Z.
Deposit date:1999-08-03
Release date:2000-01-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of CHO reductase, a member of the aldo-keto reductase superfamily.
Proteins, 38, 2000
2GVE
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BU of 2gve by Molmil
Time-of-Flight Neutron Diffraction Structure of D-Xylose Isomerase
Descriptor: COBALT (II) ION, Xylose isomerase
Authors:Katz, A.K, Li, X, Carrell, H.L, Hanson, B.L, Langan, P, Coates, L, Schoenborn, B.P, Glusker, J.P, Bunick, G.J.
Deposit date:2006-05-02
Release date:2006-05-16
Last modified:2023-08-30
Method:NEUTRON DIFFRACTION (2.2 Å)
Cite:Locating active-site hydrogen atoms in D-xylose isomerase: Time-of-flight neutron diffraction.
Proc.Natl.Acad.Sci.Usa, 103, 2006
8Z0K
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BU of 8z0k by Molmil
Cryo-EM structure of Cas8-HNH system at full R-loop state
Descriptor: DNA (37-MER), DNA (5'-D(P*GP*TP*GP*CP*GP*GP*A)-3'), HNH endonuclease, ...
Authors:Zhang, H, Zhu, H, Li, X, Liu, Y.
Deposit date:2024-04-09
Release date:2024-10-02
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Structural basis for the type I-F Cas8-HNH system.
Embo J., 43, 2024
5CMW
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BU of 5cmw by Molmil
Crystal structure of yeast Ent5 N-terminal domain-soaked in KI
Descriptor: Epsin-5, GLYCEROL, IODIDE ION
Authors:Zhang, F, Song, Y, Li, X, Teng, M.K.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional insight into the N-terminal domain of the clathrin adaptor Ent5 from Saccharomyces cerevisiae
Biochem.Biophys.Res.Commun., 477, 2016
8YJC
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Structure of Vibrio vulnificus MARTX cysteine protease domain C3727A
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, INOSITOL HEXAKISPHOSPHATE, Multifunctional autoprocessing repeat-in-toxin (MARTX), ...
Authors:Chen, L, Khan, H, Tan, L, Li, X, Zhang, G, Im, Y.J.
Deposit date:2024-03-01
Release date:2024-07-10
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis of the activation of MARTX cysteine protease domain from Vibrio vulnificus.
Plos One, 19, 2024
8ZNR
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BU of 8znr by Molmil
Cryo-EM structure of Cas8-HNH system at ssDNA-bound state
Descriptor: DNA (35-MER), RNA (56-MER), protein structure
Authors:Zhang, H, Zhu, H, Li, X, Liu, Y.
Deposit date:2024-05-28
Release date:2024-10-02
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for the type I-F Cas8-HNH system.
Embo J., 43, 2024

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