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PDB: 36 件
4OJH
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The crystal structure of truncated, Y86E mutant of S. solfataricus acylphosphatase
分子名称: Acylphosphatase, SULFATE ION
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-01-21
公開日2014-06-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Edge strand engineering prevents native-like aggregation in Sulfolobus solfataricus acylphosphatase.
Febs J., 281, 2014
5CSB
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BU of 5csb by Molmil
The crystal structure of beta2-microglobulin D76N mutant at room temperature
分子名称: Beta-2-microglobulin
著者de Rosa, M, Mota, C.S, de Sanctis, D, Bolognesi, M, Ricagno, S.
登録日2015-07-23
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.719 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
5CS7
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The crystal structure of wt beta2-microglobulin at room temperature
分子名称: Beta-2-microglobulin
著者de Rosa, M, Mota, C.S, de Sanctis, D, Bolognesi, M, Ricagno, S.
登録日2015-07-23
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
5CSG
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The crystal structure of beta2-microglobulin R97Q mutant
分子名称: ACETATE ION, Beta-2-microglobulin
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2015-07-23
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
4RMW
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BU of 4rmw by Molmil
Crystal structure of the D76A Beta-2 Microglobulin mutant
分子名称: ACETATE ION, Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
4RMU
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Crystal structure of the D76E Beta-2 Microglobulin mutant
分子名称: Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
4RMV
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Crystal structure of the D76H Beta-2 Microglobulin mutant
分子名称: ACETATE ION, Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.463 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
4OJG
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The crystal structure of V84D mutant of S. solfataricus acylphosphatase
分子名称: Acylphosphatase, GLYCEROL, PHOSPHATE ION
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-01-21
公開日2014-06-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.377 Å)
主引用文献Edge strand engineering prevents native-like aggregation in Sulfolobus solfataricus acylphosphatase.
Febs J., 281, 2014
4RMT
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Crystal structure of the D98N Beta-2 Microglobulin mutant
分子名称: ACETATE ION, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.242 Å)
主引用文献Decoding the Structural Bases of D76N 2-Microglobulin High Amyloidogenicity through Crystallography and Asn-Scan Mutagenesis.
Plos One, 10, 2015
4RMQ
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Crystal structure of the D59N Beta-2 Microglobulin mutant
分子名称: Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.461 Å)
主引用文献Decoding the Structural Bases of D76N 2-Microglobulin High Amyloidogenicity through Crystallography and Asn-Scan Mutagenesis.
Plos One, 10, 2015
4RMR
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Crystal structure of the D38N Beta-2 Microglobulin mutant
分子名称: ACETATE ION, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.529 Å)
主引用文献Decoding the Structural Bases of D76N 2-Microglobulin High Amyloidogenicity through Crystallography and Asn-Scan Mutagenesis.
Plos One, 10, 2015
4RMS
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Crystal structure of the D53N Beta-2 Microglobulin mutant
分子名称: ACETATE ION, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Decoding the Structural Bases of D76N 2-Microglobulin High Amyloidogenicity through Crystallography and Asn-Scan Mutagenesis.
Plos One, 10, 2015
4OJ3
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The crystal structure of V84P mutant of S. solfataricus Acylphosphatase
分子名称: Acylphosphatase, GLYCEROL, SULFATE ION
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-01-20
公開日2014-06-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Edge strand engineering prevents native-like aggregation in Sulfolobus solfataricus acylphosphatase.
Febs J., 281, 2014
4LB5
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Crystal structure of PKZ Zalpha in complex with ds(CG)6 (hexagonal form)
分子名称: 5'-D(*TP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3', ACETATE ION, Protein kinase containing Z-DNA binding domains
著者De Rosa, M, Zacarias, S, Athanasiadis, A.
登録日2013-06-20
公開日2013-09-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for Z-DNA binding and stabilization by the zebrafish Z-DNA dependent protein kinase PKZ.
Nucleic Acids Res., 41, 2013
4LB6
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Crystal structure of PKZ Zalpha in complex with ds(CG)6 (tetragonal form)
分子名称: 5'-D(*TP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3', Protein kinase containing Z-DNA binding domains
著者De Rosa, M, Zacarias, S, Athanasiadis, A.
登録日2013-06-20
公開日2013-09-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for Z-DNA binding and stabilization by the zebrafish Z-DNA dependent protein kinase PKZ.
Nucleic Acids Res., 41, 2013
6QW3
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BU of 6qw3 by Molmil
Calcium-bound gelsolin domain 2
分子名称: CALCIUM ION, Gelsolin
著者Scalone, E, Boni, F, Milani, M, Mastrangelo, E, de Rosa, M.
登録日2019-03-05
公開日2019-08-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献High-resolution crystal structure of gelsolin domain 2 in complex with the physiological calcium ion.
Biochem.Biophys.Res.Commun., 518, 2019
2V2K
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BU of 2v2k by Molmil
THE CRYSTAL STRUCTURE OF FDXA, A 7FE FERREDOXIN FROM MYCOBACTERIUM SMEGMATIS
分子名称: ACETATE ION, FE3-S4 CLUSTER, FERREDOXIN
著者Ricagno, S, de Rosa, M, Aliverti, A, Zanetti, G, Bolognesi, M.
登録日2007-06-06
公開日2007-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Crystal Structure of Fdxa, a 7Fe Ferredoxin from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 360, 2007
3IRQ
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BU of 3irq by Molmil
Crystal structure of a Z-Z junction
分子名称: DNA (5'-D(*AP*CP*CP*GP*CP*GP*CP*GP*AP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*TP*CP*GP*CP*GP*CP*G)-3'), Double-stranded RNA-specific adenosine deaminase
著者Athanasiadis, A, de Rosa, M.
登録日2009-08-24
公開日2010-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of a junction between two Z-DNA helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
3IRR
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Crystal Structure of a Z-Z junction (with HEPES intercalating)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*A*CP*CP*GP*CP*GP*CP*GP*AP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*G*TP*CP*GP*CP*GP*CP*GP*TP*CP*GP*CP*GP*CP*G)-3'), ...
著者Athanasiadis, A, de Rosa, M.
登録日2009-08-24
公開日2010-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure of a junction between two Z-DNA helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
2C7G
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FprA from Mycobacterium tuberculosis: His57Gln mutant
分子名称: 4-OXO-NICOTINAMIDE-ADENINE DINUCLEOTIDE PHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, NADPH-FERREDOXIN REDUCTASE FPRA, ...
著者Pennati, A, Razeto, A, De Rosa, M, Pandini, V, Vanoni, M.A, Aliverti, A, Mattevi, A, Coda, A, Zanetti, G.
登録日2005-11-24
公開日2006-07-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Role of the His57-Glu214 Ionic Couple Located in the Active Site of Mycobacterium Tuberculosis Fpra.
Biochemistry, 45, 2006
6Q9R
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Crystal structure of the pathological N184K variant of calcium-free human gelsolin
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
著者Scalone, E, Boni, F, Milani, M, Eloise, M, de Rosa, M.
登録日2018-12-18
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献The structure of N184K amyloidogenic variant of gelsolin highlights the role of the H-bond network for protein stability and aggregation properties.
Eur.Biophys.J., 49, 2020
6Q9Z
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Crystal structure of the pathological G167R variant of calcium-free human gelsolin,
分子名称: GLYCEROL, Gelsolin, SULFATE ION
著者Boni, F, Scalone, E, Milani, M, Eloise, M, de Rosa, M.
登録日2018-12-18
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献The structure of N184K amyloidogenic variant of gelsolin highlights the role of the H-bond network for protein stability and aggregation properties.
Eur.Biophys.J., 49, 2020
6QBF
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Crystal structure of the pathological D187N variant of calcium-free human gelsolin.
分子名称: GLYCEROL, Gelsolin, SODIUM ION, ...
著者Scalone, E, Boni, F, Milani, M, Eloise, M, de Rosa, M.
登録日2018-12-21
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.499 Å)
主引用文献The structure of N184K amyloidogenic variant of gelsolin highlights the role of the H-bond network for protein stability and aggregation properties.
Eur.Biophys.J., 49, 2020
3DHJ
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BU of 3dhj by Molmil
Beta 2 microglobulin mutant W60C
分子名称: Beta-2-microglobulin
著者Ricagno, S, Colombo, M, de Rosa, M, Bolognesi, M, Giorgetti, S, Bellotti, V.
登録日2008-06-18
公開日2008-11-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DE loop mutations affect beta2-microglobulin stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 377, 2008
5FAE
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N184K pathological variant of gelsolin domain 2 (trigonal form)
分子名称: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Boni, F, Milani, M, Ricagno, S, Bolognesi, M, de Rosa, M.
登録日2015-12-11
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular basis of a novel renal amyloidosis due to N184K gelsolin variant.
Sci Rep, 6, 2016

 

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