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PDB: 66 results

2QZ5
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BU of 2qz5 by Molmil
Crystal Structure of the C-terminal domain of Aida
Descriptor: Axin interactor, dorsalization associated protein
Authors:Zheng, L.S.
Deposit date:2007-08-16
Release date:2008-09-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the C-terminal domain of Aida
To be Published
2QZQ
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BU of 2qzq by Molmil
Crystal structure of C-terminal of Aida
Descriptor: Axin interactor, dorsalization associated protein
Authors:Zheng, L.S, Wu, J.W.
Deposit date:2007-08-17
Release date:2008-09-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of C-terminal of Aida
To be Published
5Y85
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BU of 5y85 by Molmil
Structure-based Insights into Self-Cleavage by a Four-way Junctional Twister-Sister Ribozyme
Descriptor: DNA/RNA (50-MER), MAGNESIUM ION, RNA (5'-R(P*AP*CP*CP*CP*GP*CP*AP*AP*GP*GP*CP*CP*GP*AP*CP*GP*GP*C)-3')
Authors:Zheng, L, Micura, R.L, Ren, A.
Deposit date:2017-08-18
Release date:2017-11-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structure-based insights into self-cleavage by a four-way junctional twister-sister ribozyme
Nat Commun, 8, 2017
5Y87
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BU of 5y87 by Molmil
Structure-based Insights into Self-Cleavage by a Four-way Junctional Twister-Sister Ribozyme
Descriptor: DNA/RNA (50-MER), MANGANESE (II) ION, RNA (5'-R(P*AP*CP*CP*CP*GP*CP*AP*AP*GP*GP*CP*CP*GP*AP*CP*GP*GP*C)-3')
Authors:Zheng, L, Micura, R.L, Ren, A.
Deposit date:2017-08-19
Release date:2017-11-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.132 Å)
Cite:Structure-based insights into self-cleavage by a four-way junctional twister-sister ribozyme
Nat Commun, 8, 2017
1XQE
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BU of 1xqe by Molmil
The mechanism of ammonia transport based on the crystal structure of AmtB of E. coli.
Descriptor: ACETATE ION, Probable ammonium transporter, SULFATE ION
Authors:Zheng, L, Kostrewa, D, Berneche, S, Winkler, F.K, Li, X.-D.
Deposit date:2004-10-12
Release date:2004-10-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The mechanism of ammonia transport based on the crystal structure of AmtB of Escherichia coli
Proc.Natl.Acad.Sci.USA, 101, 2004
1XQF
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BU of 1xqf by Molmil
The mechanism of ammonia transport based on the crystal structure of AmtB of E. coli.
Descriptor: ACETATE ION, Probable ammonium transporter, SULFATE ION
Authors:Zheng, L, Kostrewa, D, Berneche, S, Winkler, F.K, Li, X.-D.
Deposit date:2004-10-12
Release date:2004-10-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The mechanism of ammonia transport based on the crystal structure of AmtB of Escherichia coli
Proc.Natl.Acad.Sci.USA, 101, 2004
3EAD
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BU of 3ead by Molmil
Crystal structure of CALX-CBD1
Descriptor: CALCIUM ION, GLYCEROL, Na/Ca exchange protein
Authors:Zheng, L, Wang, M.
Deposit date:2008-08-25
Release date:2009-09-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structures of progressive Ca2+ binding states of the Ca2+ sensor Ca2+ binding domain 1 (CBD1) from the CALX Na+/Ca2+ exchanger reveal incremental conformational transitions.
J.Biol.Chem., 285, 2010
7XFL
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BU of 7xfl by Molmil
Structure of nucleosome-AAG complex (A-53I, free state)
Descriptor: DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Zheng, L, Tsai, B, Gao, N.
Deposit date:2022-04-01
Release date:2023-04-19
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome.
Cell Discov, 9, 2023
7XFN
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BU of 7xfn by Molmil
Structure of nucleosome-DI complex (-55I, Apo state)
Descriptor: DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Zheng, L, Tsai, B, Gao, N.
Deposit date:2022-04-01
Release date:2023-04-19
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome.
Cell Discov, 9, 2023
7XFM
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BU of 7xfm by Molmil
Structure of nucleosome-AAG complex (A-53I, post-catalytic state)
Descriptor: DNA (152-MER), DNA-3-methyladenine glycosylase, Histone H2A type 1, ...
Authors:Zheng, L, Tsai, B, Gao, N.
Deposit date:2022-04-01
Release date:2023-04-19
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome.
Cell Discov, 9, 2023
7XFC
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BU of 7xfc by Molmil
Structure of nucleosome-DI complex (-30I, Apo state)
Descriptor: DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Zheng, L, Tsai, B, Gao, N.
Deposit date:2022-04-01
Release date:2023-04-19
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome.
Cell Discov, 9, 2023
7XFI
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BU of 7xfi by Molmil
Structure of nucleosome-DI complex (-50I, Apo state)
Descriptor: DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Zheng, L, Tsai, B, Gao, N.
Deposit date:2022-04-01
Release date:2023-04-19
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome.
Cell Discov, 9, 2023
7XFH
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BU of 7xfh by Molmil
Structure of nucleosome-AAG complex (A-30I, post-catalytic state)
Descriptor: DNA (152-MER), DNA-3-methyladenine glycosylase, Histone H2A type 1, ...
Authors:Zheng, L, Tsai, B, Gao, N.
Deposit date:2022-04-01
Release date:2023-04-19
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome.
Cell Discov, 9, 2023
7XNP
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BU of 7xnp by Molmil
Structure of nucleosome-AAG complex (A-55I, post-catalytic state)
Descriptor: DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Zheng, L, Tsai, B, Gao, N.
Deposit date:2022-04-29
Release date:2023-05-03
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome.
Cell Discov, 9, 2023
7XFJ
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BU of 7xfj by Molmil
Structure of nucleosome-AAG complex (T-50I, post-catalytic state)
Descriptor: DNA (152-MER), DNA-3-methyladenine glycosylase, Histone H2A type 1, ...
Authors:Zheng, L, Tsai, B, Gao, N.
Deposit date:2022-04-01
Release date:2023-11-08
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome.
Cell Discov, 9, 2023
8HFQ
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BU of 8hfq by Molmil
Cryo-EM structure of CpcL-PBS from cyanobacterium Synechocystis sp. PCC 6803
Descriptor: C-phycocyanin alpha subunit, C-phycocyanin beta subunit, Ferredoxin--NADP reductase, ...
Authors:Zheng, L, Zhang, Z, Wang, H, Zheng, Z, Gao, N, Zhao, J.
Deposit date:2022-11-11
Release date:2023-11-08
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Cryo-EM and femtosecond spectroscopic studies provide mechanistic insight into the energy transfer in CpcL-phycobilisomes.
Nat Commun, 14, 2023
7EXT
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BU of 7ext by Molmil
Cryo-EM structure of cyanobacterial phycobilisome from Synechococcus sp. PCC 7002
Descriptor: Allophycocyanin alpha subunit, Allophycocyanin beta subunit, Allophycocyanin subunit alpha-B, ...
Authors:Zheng, L, Zheng, Z, Li, X, Wang, G, Zhang, K, Wei, P, Zhao, J, Gao, N.
Deposit date:2021-05-28
Release date:2021-10-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insight into the mechanism of energy transfer in cyanobacterial phycobilisomes.
Nat Commun, 12, 2021
7EYD
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BU of 7eyd by Molmil
Cryo-EM structure of cyanobacterial phycobilisome from Anabaena sp. PCC 7120
Descriptor: Allophycocyanin subunit alpha 1, Allophycocyanin subunit alpha-B, Allophycocyanin subunit beta, ...
Authors:Zheng, L, Zheng, Z, Li, X, Wang, G, Zhang, K, Wei, P, Zhao, J, Gao, N.
Deposit date:2021-05-30
Release date:2021-10-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural insight into the mechanism of energy transfer in cyanobacterial phycobilisomes.
Nat Commun, 12, 2021
2L5Y
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BU of 2l5y by Molmil
NMR structure of calcium-loaded STIM2 EF-SAM.
Descriptor: CALCIUM ION, Stromal interaction molecule 2
Authors:Zheng, L, Stathopulos, P.B, Ikura, M.
Deposit date:2010-11-09
Release date:2011-01-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Auto-inhibitory role of the EF-SAM domain of STIM proteins in store-operated calcium entry.
Proc.Natl.Acad.Sci.USA, 108, 2011
7S0Z
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BU of 7s0z by Molmil
Structures of TcdB in complex with R-Ras
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, AMMONIUM ION, ...
Authors:Zheng, L, Rongsheng, J, Peng, C.
Deposit date:2021-08-31
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural basis for selective modification of Rho and Ras GTPases by Clostridioides difficile toxin B.
Sci Adv, 7, 2021
7S0Y
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BU of 7s0y by Molmil
Structures of TcdB in complex with Cdc42
Descriptor: Cell division control protein 42 homolog, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zheng, L, Rongsheng, J, Peng, C.
Deposit date:2021-08-31
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural basis for selective modification of Rho and Ras GTPases by Clostridioides difficile toxin B.
Sci Adv, 7, 2021
6K61
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BU of 6k61 by Molmil
Cryo-EM structure of the tetrameric photosystem I from a heterocyst-forming cyanobacterium Anabaena sp. PCC7120
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Zheng, L, Li, Y, Li, X, Zhong, Q, Li, N, Zhang, K, Zhang, Y, Chu, H, Ma, C, Li, G, Zhao, J, Gao, N.
Deposit date:2019-05-31
Release date:2019-10-09
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.37 Å)
Cite:Structural and functional insights into the tetrameric photosystem I from heterocyst-forming cyanobacteria.
Nat.Plants, 5, 2019
7W27
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BU of 7w27 by Molmil
Crystal structure of BEND3-BEN4-DNA complex
Descriptor: BEN domain-containing protein 3, DNA (5'-D(P*GP*GP*AP*CP*CP*CP*AP*CP*GP*CP*AP*GP*C)-3'), DNA (5'-D(P*GP*GP*CP*TP*GP*CP*GP*TP*GP*GP*GP*TP*C)-3')
Authors:Zheng, L, Ren, A.
Deposit date:2021-11-22
Release date:2022-02-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Distinct structural bases for sequence-specific DNA binding by mammalian BEN domain proteins.
Genes Dev., 36, 2022
7D72
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BU of 7d72 by Molmil
Cryo-EM structures of human GMPPA/GMPPB complex bound to GDP-Mannose
Descriptor: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, MAGNESIUM ION, Mannose-1-phosphate guanyltransferase alpha, ...
Authors:Zheng, L, Liu, Z, Wang, Y, Yang, F, Wang, J, Qing, J, Cai, X, Mo, X, Gao, N, Jia, D.
Deposit date:2020-10-02
Release date:2021-05-05
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of human GMPPA-GMPPB complex reveal how cells maintain GDP-mannose homeostasis.
Nat.Struct.Mol.Biol., 28, 2021
7D73
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BU of 7d73 by Molmil
Cryo-EM structure of GMPPA/GMPPB complex bound to GTP (State I)
Descriptor: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, GUANOSINE-5'-TRIPHOSPHATE, Mannose-1-phosphate guanyltransferase alpha, ...
Authors:Zheng, L, Liu, Z, Wang, Y, Yang, F, Wang, J, Qing, J, Cai, X, Mo, X, Gao, N, Jia, D.
Deposit date:2020-10-02
Release date:2021-05-05
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of human GMPPA-GMPPB complex reveal how cells maintain GDP-mannose homeostasis.
Nat.Struct.Mol.Biol., 28, 2021

 

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