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PDB: 245 results

3CVK
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BU of 3cvk by Molmil
Crystal structure of HCV NS5B polymerase with a novel pyridazinone inhibitor
Descriptor: N-{3-[1-(3,3-Dimethyl-butyl)-4-hydroxy-2-oxo-1,2,4a,5,6,7-hexahydro-pyrrolo[1,2-b]pyridazin-3-yl]-1,1-dioxo-1,2-dihydro -1lambda6-benzo[1,2,4]thiadiazin-7-yl}-methanesulfonamide, RNA-directed RNA polymerase
Authors:Zhao, Q, Showalter, R.E, Han, Q, Kissinger, C.R.
Deposit date:2008-04-18
Release date:2009-04-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Hexahydro-pyrrolo- and hexahydro-1H-pyrido[1,2-b]pyridazin-2-ones as potent inhibitors of HCV NS5B polymerase.
Bioorg.Med.Chem.Lett., 18, 2008
8J7N
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BU of 8j7n by Molmil
The cryo-EM structure of Fe3+ induced alpha-syn fibril.
Descriptor: Transmembrane protein 106B
Authors:Zhao, Q.Y, Tao, Y.Q, Yan, F, Liu, C, Li, D.
Deposit date:2023-04-27
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The cryo-EM structure of PBB3 bound TMEM106B fibril.
To Be Published
8J7P
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BU of 8j7p by Molmil
The cryo-EM structure of PiB bound TMEM106B fibril.
Descriptor: Transmembrane protein 106B
Authors:Zhao, Q.Y, Tao, Y.Q, Yan, F, Liu, C, Li, D.
Deposit date:2023-04-27
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The cryo-EM structure of PiB bound TMEM106B fibril.
To Be Published
1YDU
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BU of 1ydu by Molmil
Solution NMR structure of At5g01610, an Arabidopsis thaliana protein containing DUF538 domain
Descriptor: At5g01610
Authors:Zhao, Q, Cornilescu, C.C, Lee, M.S, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-12-26
Release date:2005-02-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution NMR structure of At5g01610, an Arabidopsis thaliana protein containing DUF538 domain
To be Published
4NE1
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BU of 4ne1 by Molmil
Human MHF1 MHF2 DNA complexes
Descriptor: Centromere protein S, Centromere protein X, DNA (26-MER)
Authors:Zhao, Q, Saro, D, Sachpatzidis, A, Sung, P, Xiong, Y.
Deposit date:2013-10-28
Release date:2014-01-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (6.499 Å)
Cite:The MHF complex senses branched DNA by binding a pair of crossover DNA duplexes.
Nat Commun, 5, 2014
4NDY
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BU of 4ndy by Molmil
Human MHF1-MHF2 DNA complex
Descriptor: Centromere protein S, Centromere protein X, DNA (26-MER)
Authors:Zhao, Q, Saro, D, Sachpatzidis, A, Sung, P, Xiong, Y.
Deposit date:2013-10-28
Release date:2014-01-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (6.999 Å)
Cite:The MHF complex senses branched DNA by binding a pair of crossover DNA duplexes.
Nat Commun, 5, 2014
3D23
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BU of 3d23 by Molmil
Main protease of HCoV-HKU1
Descriptor: 3C-like proteinase, N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
Authors:Zhao, Q, Chen, C, Li, S, Zou, Y.
Deposit date:2008-05-07
Release date:2008-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the main protease from a global infectious human coronavirus, HCoV-HKU1.
J.Virol., 82, 2008
4NE5
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BU of 4ne5 by Molmil
Human MHF1-MHF2 complex
Descriptor: Centromere protein S, Centromere protein X
Authors:Zhao, Q, Saro, D, Sachpatzidis, A, Sung, P, Xiong, Y.
Deposit date:2013-10-28
Release date:2013-12-25
Last modified:2014-02-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The MHF complex senses branched DNA by binding a pair of crossover DNA duplexes.
Nat Commun, 5, 2014
4NE6
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BU of 4ne6 by Molmil
Human MHF1-MHF2 complex
Descriptor: Centromere protein S, Centromere protein X
Authors:Zhao, Q, Saro, D, Sachpatzidis, A, Sung, P, Xiong, Y.
Deposit date:2013-10-28
Release date:2013-12-25
Last modified:2014-02-12
Method:X-RAY DIFFRACTION (2.1001 Å)
Cite:The MHF complex senses branched DNA by binding a pair of crossover DNA duplexes.
Nat Commun, 5, 2014
4NE3
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BU of 4ne3 by Molmil
Human MHF1-MHF2 complex
Descriptor: Centromere protein S, Centromere protein X
Authors:Zhao, Q, Saro, D, Sachpatzidis, A, Sung, P, Xiong, Y.
Deposit date:2013-10-28
Release date:2013-12-25
Last modified:2014-02-12
Method:X-RAY DIFFRACTION (1.8007 Å)
Cite:The MHF complex senses branched DNA by binding a pair of crossover DNA duplexes.
Nat Commun, 5, 2014
2HEM
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BU of 2hem by Molmil
NMR structure and Mg2+ binding of an RNA segment that underlies the L7/L12 stalk in the E.coli 50S ribosomal subunit.
Descriptor: 5'-R(P*GP*GP*GP*AP*AP*GP*GP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*CP*GP*GP*CP*CP*C)-3'
Authors:Zhao, Q, Nagaswamy, U, Lee, H, Xia, Y, Gao, X, Fox, G.
Deposit date:2006-06-21
Release date:2006-09-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure and Mg2+ binding of an RNA segment that underlies the L7/L12 stalk in the E.coli 50S ribosomal subunit
Nucleic Acids Res., 33, 2005
2NS2
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BU of 2ns2 by Molmil
Crystal Structure of Spindlin1
Descriptor: PHOSPHATE ION, Spindlin-1
Authors:Zhao, Q, Qin, L, Jiang, F, Wu, B, Yue, W, Xu, F, Rong, Z, Yuan, H, Xie, X, Gao, Y, Bai, C, Bartlam, M.
Deposit date:2006-11-02
Release date:2006-11-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of human spindlin1. Tandem tudor-like domains for cell cycle regulation
J.Biol.Chem., 282, 2007
8KF4
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BU of 8kf4 by Molmil
The cryo-EM structure of type1 amyloid beta 42 fibril in AD2 patient.
Descriptor: Amyloid-beta precursor protein
Authors:Zhao, Q.Y, Tao, Y.Q, Liu, C, Li, D.
Deposit date:2023-08-15
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The cryo-EM structure of type1 amyloid beta 42 fibril in AD2 patient.
To Be Published
8KF1
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BU of 8kf1 by Molmil
The cryo-EM structure of AV-45 bound type1 amyloid beta 42 fibril.
Descriptor: 4-[2-[6-[2-[2-(2-fluoranylethoxy)ethoxy]ethoxy]pyridin-3-yl]ethyl]-~{N}-methyl-aniline, P3(40)
Authors:Zhao, Q.Y, Tao, Y.Q, Liu, C, Li, D.
Deposit date:2023-08-15
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The cryo-EM structure of AV-45 bound type1 amyloid beta 42 fibril.
To Be Published
8KEW
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BU of 8kew by Molmil
The cryo-EM structure of type1 amyloid beta 42 fibril.
Descriptor: P3(40)
Authors:Zhao, Q.Y, Tao, Y.Q, Liu, C, Li, D.
Deposit date:2023-08-13
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The cryo-EM structure of type1 amyloid beta 42 fibril.
To Be Published
8KF6
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BU of 8kf6 by Molmil
The cryo-EM structure of AV-45 bound type3 amyloid beta 42 fibril.
Descriptor: P3(40)
Authors:Zhao, Q.Y, Tao, Y.Q, Liu, C, Li, D.
Deposit date:2023-08-15
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The cryo-EM structure of type1 amyloid beta 42 fibril.
To Be Published
8KF5
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BU of 8kf5 by Molmil
The cryo-EM structure of type1 amyloid beta 42 fibril in AD3.
Descriptor: Amyloid-beta precursor protein
Authors:Zhao, Q.Y, Tao, Y.Q, Liu, C, Li, D.
Deposit date:2023-08-15
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The cryo-EM structure of type1 amyloid beta 42 fibril in AD3.
To Be Published
8KF3
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BU of 8kf3 by Molmil
The cryo-EM structure of type3 amyloid beta 42 fibril.
Descriptor: Amyloid-beta precursor protein
Authors:Zhao, Q.Y, Tao, Y.Q, Liu, C, Li, D.
Deposit date:2023-08-15
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The cryo-EM structure of type1 amyloid beta 42 fibril.
To Be Published
7YS6
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BU of 7ys6 by Molmil
Cryo-EM structure of the Serotonin 6 (5-HT6) receptor-DNGs-scFv16 complex
Descriptor: 5-hydroxytryptamine receptor 6, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhao, Q.Y, Wang, Y.F, He, L, Wang, S, Cong, Y.
Deposit date:2022-08-11
Release date:2023-03-29
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into constitutive activity of 5-HT 6 receptor.
Proc.Natl.Acad.Sci.USA, 120, 2023
8K8K
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BU of 8k8k by Molmil
Structure of Klebsiella pneumonia ModA
Descriptor: Molybdate transporter periplasmic protein
Authors:Zhao, Q, Bartlam, M.
Deposit date:2023-07-31
Release date:2023-11-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural analysis of molybdate binding protein ModA from Klebsiella pneumoniae.
Biochem.Biophys.Res.Commun., 681, 2023
8K8L
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BU of 8k8l by Molmil
Structure of Klebsiella pneumonia ModA with molybdate
Descriptor: MOLYBDATE ION, Molybdate transporter periplasmic protein
Authors:Zhao, Q, Bartlam, M.
Deposit date:2023-07-31
Release date:2023-11-01
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural analysis of molybdate binding protein ModA from Klebsiella pneumoniae.
Biochem.Biophys.Res.Commun., 681, 2023
8K7N
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BU of 8k7n by Molmil
Structure of ferric-binding protein KfuA
Descriptor: FE (III) ION, Ferric iron ABC transporter, iron-binding protein
Authors:Zhao, Q, Bartlam, M.
Deposit date:2023-07-26
Release date:2024-07-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Klebsiella pneumoniae ferric-binding protein KfuA
To be published
7F5W
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BU of 7f5w by Molmil
Conserved and divergent strigolactone signaling in Saccharum spontaneum
Descriptor: High tillering and dwarf 2 protein
Authors:Zhao, Q.Q, Ming, Z.H.
Deposit date:2021-06-23
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.654 Å)
Cite:Identification of Conserved and Divergent Strigolactone Receptors in Sugarcane Reveals a Key Residue Crucial for Plant Branching Control.
Front Plant Sci, 12, 2021
7X84
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BU of 7x84 by Molmil
Cryo-EM structure of the TMEM106B fibril from Parkinson's disease dementia
Descriptor: Transmembrane protein 106B
Authors:Zhao, Q.Y, Xia, W.C, Fan, Y, Sun, Y.P, Tao, Y.Q, Liu, C.
Deposit date:2022-03-11
Release date:2022-06-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Generic amyloid fibrillation of TMEM106B in patient with Parkinson's disease dementia and normal elders.
Cell Res., 32, 2022
4LVF
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BU of 4lvf by Molmil
Fragment-based Identification of Amides Derived From trans-2-(Pyridin-3-yl)cyclopropanecarboxylic Acid as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)
Descriptor: (1S,2S)-2-phenyl-N-(pyridin-4-yl)cyclopropanecarboxamide, 1,2-ETHANEDIOL, Nicotinamide phosphoribosyltransferase, ...
Authors:Giannetti, A.M, Zheng, X, Skelton, N, Wang, W, Bravo, B, Feng, Y, Gunzner-Toste, J, Ho, Y, Hua, R, Wang, C, Zhao, Q, Liederer, B.M, Liu, Y, O'Brien, T, Oeh, J, Sampath, D, Shen, Y, Wang, L, Wu, H, Xiao, Y, Yuen, P, Zak, M, Zhao, G, Dragovich, P.S.
Deposit date:2013-07-26
Release date:2013-09-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Identification of amides derived from 1H-pyrazolo[3,4-b]pyridine-5-carboxylic acid as potent inhibitors of human nicotinamide phosphoribosyltransferase (NAMPT).
Bioorg.Med.Chem.Lett., 23, 2013

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