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PDB: 113 件

4V11
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Structure of Synaptotagmin-1 with SV2A peptide phosphorylated at Thr84
分子名称: CALCIUM ION, GLYCEROL, SYNAPTIC VESICLE GLYCOPROTEIN 2A, ...
著者Zhang, N, Gordon, S.L, Fritsch, M.J, Esoof, N, Campbell, D, Gourlay, R, Velupillai, S, Macartney, T, Peggie, M, vanAalten, D.M.F, Cousin, M.A, Alessi, D.R.
登録日2014-09-22
公開日2015-02-25
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Phosphorylation of Synaptic Vesicle Protein 2A at Thr84 by Casein Kinase 1 Family Kinases Controls the Specific Retrieval of Synaptotagmin-1.
J.Neurosci., 35, 2015
6UF2
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NMR structure of biofilm-related Se0862 from Synechococcus elongatus
分子名称: Biofilm-related protein
著者Zhang, N, LiWang, A.L.
登録日2019-09-23
公開日2020-09-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR structure of Se0862, a highly conserved cyanobacterial protein involved in biofilm formation.
Protein Sci., 29, 2020
1JJP
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A(GGGG) Pentad-Containing Dimeric DNA Quadruplex Involving Stacked G(anti)G(anti)G(anti)G(syn) Tetrads
分子名称: 5'-D(*GP*GP*GP*AP*GP*GP*TP*TP*TP*GP*GP*GP*AP*T)-3'
著者Zhang, N, Gorin, A, Majumdar, A, Kettani, A, Chernichenko, N, Skripkin, E, Patel, D.J.
登録日2001-07-09
公開日2001-09-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献V-shaped scaffold: a new architectural motif identified in an A x (G x G x G x G) pentad-containing dimeric DNA quadruplex involving stacked G(anti) x G(anti) x G(anti) x G(syn) tetrads.
J.Mol.Biol., 311, 2001
1JVC
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Dimeric DNA Quadruplex Containing Major Groove-Aligned A.T.A.T and G.C.G.C Tetrads Stabilized by Inter-Subunit Watson-Crick A:T and G:C Pairs
分子名称: 5'-D(*GP*AP*GP*CP*AP*GP*GP*T)-3'
著者Zhang, N, Gorin, A, Majumdar, A, Kettani, A, Chernichenko, N, Skripkin, E, Patel, D.J.
登録日2001-08-29
公開日2001-10-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Dimeric DNA quadruplex containing major groove-aligned A-T-A-T and G-C-G-C tetrads stabilized by inter-subunit Watson-Crick A-T and G-C pairs.
J.Mol.Biol., 312, 2001
1Y9H
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Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement
分子名称: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 5'-D(*CP*CP*AP*TP*(5CM)P*(BPG)P*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3'
著者Zhang, N, Lin, C, Huang, X, Kolbanovskiy, A, Hingerty, B.E, Amin, S, Broyde, S, Geacintov, N.E, Patel, D.J.
登録日2004-12-15
公開日2005-03-22
最終更新日2024-04-24
実験手法SOLUTION NMR
主引用文献Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement.
J.Mol.Biol., 346, 2005
5ESW
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Crystal structure of Apo hypoxanthine-guanine phosphoribosyltransferase from Legionella pneumophila
分子名称: PHOSPHATE ION, Purine/pyrimidine phosphoribosyltransferase
著者Zhang, N, Gong, X, Lu, M, Chen, X, Qin, X, Ge, H.
登録日2015-11-17
公開日2016-03-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of Apo and GMP bound hypoxanthine-guanine phosphoribosyltransferase from Legionella pneumophila and the implications in gouty arthritis
J.Struct.Biol., 194, 2016
5ESX
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Crystal structure of hypoxanthine-guanine phosphoribosyltransferase complexed with GMP from Legionella pneumophila
分子名称: GUANOSINE-5'-MONOPHOSPHATE, Purine/pyrimidine phosphoribosyltransferase
著者Zhang, N, Gong, X, Lu, M, Chen, X, Qin, X, Ge, H.
登録日2015-11-17
公開日2016-03-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Crystal structures of Apo and GMP bound hypoxanthine-guanine phosphoribosyltransferase from Legionella pneumophila and the implications in gouty arthritis
J.Struct.Biol., 194, 2016
1S8K
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Solution Structure of BmKK4, A Novel Potassium Channel Blocker from Scorpion Buthus martensii Karsch, 25 structures
分子名称: Toxin BmKK4
著者Zhang, N, Chen, X, Li, M, Cao, C, Wang, Y, Hu, G, Wu, H.
登録日2004-02-02
公開日2005-02-08
最終更新日2024-10-30
実験手法SOLUTION NMR
主引用文献Solution structure of BmKK4, the first member of subfamily alpha-KTx 17 of scorpion toxins
Biochemistry, 43, 2004
2AQY
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(3+1) assembly of three human telomeric DNA repeats into an asymmetrical dimeric G-quadruplex
分子名称: 5'-D(*GP*(OIP)P*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3', 5'-D(*TP*AP*GP*GP*GP*(DU))-3'
著者Zhang, N, Phan, A.T, Patel, D.J.
登録日2005-08-18
公開日2006-03-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献(3 + 1) Assembly of three human telomeric repeats into an asymmetric dimeric G-quadruplex
J.Am.Chem.Soc., 127, 2005
3U83
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Crystal structure of nectin-1
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Poliovirus receptor-related protein 1
著者Zhang, N, Yan, J, Lu, G, Guo, Z, Fan, Z, Wang, J, Shi, Y, Qi, J, Gao, G.F.
登録日2011-10-15
公開日2012-03-21
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion.
Nat Commun, 2, 2011
3U82
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Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion
分子名称: Envelope glycoprotein D, Poliovirus receptor-related protein 1
著者Zhang, N, Yan, J, Lu, G, Guo, Z, Fan, Z, Wang, J, Shi, Y, Qi, J, Gao, G.F.
登録日2011-10-15
公開日2012-03-21
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (3.164 Å)
主引用文献Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion.
Nat Commun, 2, 2011
3QQ3
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Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides
分子名称: 9-mer peptide from Neuraminidase, Beta-2-microglobulin, MHC class I antigen
著者Zhang, N, Qi, J, Gao, F, Pan, X, Chen, R, Li, Q, Chen, Z, Li, X, Xia, C, Gao, G.F.
登録日2011-02-15
公開日2011-12-28
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides.
J.Virol., 85, 2011
3QQ4
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Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides
分子名称: Beta-2-microglobulin, MHC class I antigen, VP35
著者Zhang, N, Qi, J, Gao, F, Pan, X, Chen, R, Li, Q, Chen, Z, Li, X, Xia, C, Gao, G.F.
登録日2011-02-15
公開日2011-12-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides.
J.Virol., 85, 2011
5GNE
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BU of 5gne by Molmil
Crystal structure of LapB from Legionella pneumophila
分子名称: Leucine aminopeptidase, SULFATE ION, ZINC ION
著者Zhang, N, Ge, H.
登録日2016-07-20
公開日2017-08-30
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure and Biochemical Characterization of an Aminopeptidase LapB from Legionella pneumophila.
J. Agric. Food Chem., 65, 2017
7N82
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NMR Solution structure of Se0862
分子名称: Biofilm-related protein
著者Zhang, N, LiWang, A.L.
登録日2021-06-11
公開日2021-07-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Assessment of prediction methods for protein structures determined by NMR in CASP14: Impact of AlphaFold2.
Proteins, 89, 2021
2Z4D
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BU of 2z4d by Molmil
NMR Structures of Yeast Proteasome Component Rpn13
分子名称: 26S proteasome regulatory subunit RPN13
著者Zhang, N, Walters, K.J.
登録日2007-06-15
公開日2008-05-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Proteasome subunit Rpn13 is a novel ubiquitin receptor.
Nature, 453, 2008
2KDF
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NMR structure of minor S5a (196-306):K48 linked diubiquitin species
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
著者Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J.
登録日2009-01-06
公開日2009-09-01
最終更新日2024-10-30
実験手法SOLUTION NMR
主引用文献Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
2OEY
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Solution Structure of a Designed Spirocyclic Helical Ligand Binding at a Two-Base Bulge Site in DNA
分子名称: (1R,3A'S,10'S,10A'R)-7-METHOXY-2-OXO-10',10A'-DIHYDRO-2H,3A'H-SPIRO[NAPHTHALENE-1,3'-PENTALENO[1,2-B]NAPHTHALEN]-10'-YL 2,6-DIDEOXY-2-(METHYLAMINO)-ALPHA-D-GALACTOPYRANOSIDE, DNA (25-MER)
著者Zhang, N, Lin, Y, Xiao, Z, Jones, G.B, Goldberg, I.H.
登録日2007-01-01
公開日2007-04-10
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of a Designed Spirocyclic Helical Ligand Binding at a Two-Base Bulge Site in DNA.
Biochemistry, 46, 2007
2KDE
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NMR structure of major S5a (196-306):K48 linked diubiquitin species
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
著者Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J.
登録日2009-01-06
公開日2009-09-01
最終更新日2024-11-20
実験手法SOLUTION NMR
主引用文献Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
5H6X
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The crystal structure of RpoS fragment including a partial region 1.2 and region 2 from intracellular pathogen Legionella pneumophila
分子名称: GLYCEROL, RNA polymerase sigma factor RpoS, SODIUM ION
著者Zhang, N, Chen, X, Gong, X, Ge, H.
登録日2016-11-15
公開日2017-11-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献High-Resolution Crystal Structure of RpoS Fragment including a Partial Region 1.2 and Region 2 from the Intracellular Pathogen Legionella pneumophila
Crystals, 8, 2018
7E1N
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Crystal structure of PhlH in complex with 2,4-diacetylphloroglucinol
分子名称: 2,4-bis[(1R)-1-oxidanylethyl]benzene-1,3,5-triol, DUF1956 domain-containing protein
著者Zhang, N, Wu, J, He, Y.X, Ge, H.
登録日2021-02-02
公開日2022-02-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis for coordinating secondary metabolite production by bacterial and plant signaling molecules.
J.Biol.Chem., 298, 2022
7E1L
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Crystal structure of apo form PhlH
分子名称: DUF1956 domain-containing protein
著者Zhang, N, Wu, J, He, Y.X, Ge, H.
登録日2021-02-01
公開日2022-02-02
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis for coordinating secondary metabolite production by bacterial and plant signaling molecules.
J.Biol.Chem., 298, 2022
7XWY
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Crystal structure of spFft3 N-terminal truncation
分子名称: ATP-dependent helicase fft3, SULFATE ION
著者Zhang, N, Jiang, T, Huo, Y.
登録日2022-05-27
公開日2023-12-06
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of spFft3 N-terminal truncation
To Be Published
7V6V
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trimolecular G-quadruplexes consists of a hairpin motif and two short chains
分子名称: DNA (5'-D(*CP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'), DNA (5'-D(*TP*GP*GP*GP*A)-3')
著者Zhang, N, Jing, H.T, Hu, W.X.
登録日2021-08-20
公開日2023-02-08
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献Conversion to Trimolecular G-Quadruplex by Spontaneous Hoogsteen Pairing-Based Strand Displacement Reaction between Bimolecular G-Quadruplex and Double G-Rich Probes.
J.Am.Chem.Soc., 2023
7FF5
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The crystal structure of Ruminiclostridium cellulolyticum Phosphocarrier
分子名称: Phosphocarrier, HPr family, SULFATE ION
著者Zhang, N, Ge, H.
登録日2021-07-22
公開日2022-07-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献The crystal structure of Ruminiclostridium cellulolyticum Phosphocarrier
To Be Published

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