Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 631 results

8JTJ
DownloadVisualize
BU of 8jtj by Molmil
Cryo-EM structure of GeoCas9-sgRNA-dsDNA ternary complex
Descriptor: CRISPR-associated endonuclease Cas9, DNA (29-MER), DNA (5'-D(P*GP*GP*GP*CP*GP*CP*GP*AP*A)-3'), ...
Authors:Shen, P.P, Liu, B.B, Li, X, Zhang, L.L, Chen, C.-C, Guo, R.-T.
Deposit date:2023-06-21
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Cryo-EM structure of GeoCas9-sgRNA-DNA ternary complex
To Be Published
7VPN
DownloadVisualize
BU of 7vpn by Molmil
Crystal Structure of the dioxygenase CcTet from Coprinopsis cinereain in complex with Mn(II) and N-Oxalylglycine
Descriptor: CcTet molecule, MANGANESE (II) ION, N-OXALYLGLYCINE
Authors:Mu, Y.J, Zhang, L, Zhang, L.
Deposit date:2021-10-17
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A fungal dioxygenase CcTet serves as a eukaryotic 6mA demethylase on duplex DNA.
Nat.Chem.Biol., 18, 2022
7W5P
DownloadVisualize
BU of 7w5p by Molmil
Crystal Structure of the dioxygenase CcTet from Coprinopsis cinereain bound to 12bp N6-methyldeoxyadenine (6mA) containing duplex DNA
Descriptor: CcTet, DNA, DNA (12-MER), ...
Authors:Mu, Y.J, Zhang, L, Zhang, L.
Deposit date:2021-11-30
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A fungal dioxygenase CcTet serves as a eukaryotic 6mA demethylase on duplex DNA.
Nat.Chem.Biol., 18, 2022
6J8V
DownloadVisualize
BU of 6j8v by Molmil
Structure of MOEN5-SSO7D fusion protein in complex with ligand 2
Descriptor: FARNESYL, MoeN5,DNA-binding protein 7d
Authors:Ko, T.P, Zhang, L.L, Chen, C.C, Guo, R.T.
Deposit date:2019-01-21
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Complex structures of MoeN5 with substrate analogues suggest sequential catalytic mechanism.
Biochem. Biophys. Res. Commun., 511, 2019
6J5I
DownloadVisualize
BU of 6j5i by Molmil
Cryo-EM structure of the mammalian DP-state ATP synthase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F1 subunit epsilon, ...
Authors:Gu, J, Zhang, L, Yi, J, Yang, M.
Deposit date:2019-01-11
Release date:2019-06-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
Science, 364, 2019
6J54
DownloadVisualize
BU of 6j54 by Molmil
Cryo-EM structure of the mammalian E-state ATP synthase FO section
Descriptor: ATP synthase membrane subunit 6.8PL, ATP synthase membrane subunit DAPIT, ATP synthase peripheral stalk-membrane subunit b, ...
Authors:Gu, J, Zhang, L, Yi, J, Yang, M.
Deposit date:2019-01-10
Release date:2019-06-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.94 Å)
Cite:Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
Science, 364, 2019
6J5A
DownloadVisualize
BU of 6j5a by Molmil
Cryo-EM structure of the mammalian DP-state ATP synthase FO section
Descriptor: ATP synthase membrane subunit 6.8PL, ATP synthase membrane subunit DAPIT, ATP synthase peripheral stalk-membrane subunit b, ...
Authors:Gu, J, Zhang, L, Yi, J, Yang, M.
Deposit date:2019-01-10
Release date:2019-06-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.35 Å)
Cite:Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
Science, 364, 2019
6J5K
DownloadVisualize
BU of 6j5k by Molmil
Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F1 subunit alpha, ...
Authors:Gu, J, Zhang, L, Yi, J, Yang, M.
Deposit date:2019-01-11
Release date:2019-06-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
Science, 364, 2019
6J5J
DownloadVisualize
BU of 6j5j by Molmil
Cryo-EM structure of the mammalian E-state ATP synthase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F1 subunit epsilon, ...
Authors:Gu, J, Zhang, L, Yi, J, Yang, M.
Deposit date:2019-01-11
Release date:2019-06-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
Science, 364, 2019
6IJX
DownloadVisualize
BU of 6ijx by Molmil
Crystal Structure of AKR1C1 complexed with meclofenamic acid
Descriptor: 2-[(2,6-dichloro-3-methyl-phenyl)amino]benzoic acid, Aldo-keto reductase family 1 member C1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zheng, X, Zhao, Y, Zhang, L, Zhang, H, Chen, Y, Hu, X.
Deposit date:2018-10-12
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Screening, synthesis, crystal structure, and molecular basis of 6-amino-4-phenyl-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitriles as novel AKR1C3 inhibitors.
Bioorg.Med.Chem., 26, 2018
7XSP
DownloadVisualize
BU of 7xsp by Molmil
Structure of gRAMP-target RNA
Descriptor: RAMP superfamily protein, RNA (35-MER), RNA (5'-R(P*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*G)-3'), ...
Authors:Feng, Y, Zhang, L.X.
Deposit date:2022-05-15
Release date:2022-11-09
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022
7YHS
DownloadVisualize
BU of 7yhs by Molmil
Structure of Csy-AcrIF4-dsDNA
Descriptor: AcrIF4, CRISPR type I-F/YPEST-associated protein Csy2, CRISPR-associated protein Csy3, ...
Authors:Feng, Y, Zhang, L.X.
Deposit date:2022-07-14
Release date:2023-03-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Anti-CRISPR protein AcrIF4 inhibits the type I-F CRISPR-Cas surveillance complex by blocking nuclease recruitment and DNA cleavage.
J.Biol.Chem., 298, 2022
7FIR
DownloadVisualize
BU of 7fir by Molmil
The crystal structure of beta-1,2-mannobiose phosphorylase in complex with 1,4-mannobiose
Descriptor: Beta-1,2-mannobiose phosphorylase, PENTAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, ...
Authors:Dai, L, Chang, Z, Yang, J, Liu, W, Yang, Y, Chen, C.-C, Zhang, L, Huang, J, Sun, Y, Guo, R.-T.
Deposit date:2021-08-01
Release date:2022-01-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural investigation of a thermostable 1,2-beta-mannobiose phosphorylase from Thermoanaerobacter sp. X-514.
Biochem.Biophys.Res.Commun., 579, 2021
7EJB
DownloadVisualize
BU of 7ejb by Molmil
Crystal structure of juvenile hormone acid methyltransferase JHAMT mutant Q15E
Descriptor: Juvenile hormone acid methyltransferase
Authors:Guo, P.C, Zhang, Y.S, Zhang, l, Xu, H.Y, Xia, Q.Y.
Deposit date:2021-04-01
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural insights into catalytic mechanism of juvenile hormone acid methyltransferase JHAMT
To Be Published
8J8K
DownloadVisualize
BU of 8j8k by Molmil
Membrane bound PRTase, C3 symmetry, acceptor bound
Descriptor: Decaprenyl-phosphate phosphoribosyltransferase, MONO-TRANS, OCTA-CIS DECAPRENYL-PHOSPHATE
Authors:Wu, F.Y, Gao, S, Zhang, L, Rao, Z.H.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structural analysis of phosphoribosyltransferase-mediated cell wall precursor synthesis in Mycobacterium tuberculosis.
Nat Microbiol, 9, 2024
6JD6
DownloadVisualize
BU of 6jd6 by Molmil
An ankyrin-repeat protein complex guides cargos from inner envelope to thylakoid Tat pathway
Descriptor: Ankyrin repeat domain-containing protein EMB506, chloroplastic, Ankyrin repeat domain-containing protein, ...
Authors:Ouyang, M, Zhang, L.X.
Deposit date:2019-01-31
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An ankyrin-repeat protein complex guides cargos from inner envelope to thylakoid Tat pathway
To Be Published
8K1O
DownloadVisualize
BU of 8k1o by Molmil
mycobacterial efflux pump, AMPPNP bound state
Descriptor: CARDIOLIPIN, MAGNESIUM ION, Multidrug efflux system ATP-binding protein Rv1218c, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:mycobacterial efflux pump, AMPPNP bound state
To Be Published
8K1N
DownloadVisualize
BU of 8k1n by Molmil
mycobacterial efflux pump, substrate-bound state
Descriptor: CARDIOLIPIN, Multidrug efflux system ATP-binding protein Rv1218c, Multidrug efflux system permease protein Rv1217c, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:mycobacterial efflux pump, substrate-bound state
To Be Published
8K1M
DownloadVisualize
BU of 8k1m by Molmil
mycobacterial efflux pump, apo state
Descriptor: (1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, CARDIOLIPIN, Multidrug efflux system ATP-binding protein Rv1218c, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:mycobacterial efflux pump, apo state
To Be Published
8K1P
DownloadVisualize
BU of 8k1p by Molmil
mycobacterial efflux pump, ADP+vanadate bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, CARDIOLIPIN, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:mycobacterial efflux pump, ADP+vanadate bound state
To Be Published
7EXS
DownloadVisualize
BU of 7exs by Molmil
Thermomicrobium roseum sarcosine oxidase mutant - S320R
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Xin, Y, Shen, C, Tang, M.W, Shi, Y, Guo, Z.T, Gu, Z.H, Shao, J, Zhang, L.
Deposit date:2021-05-28
Release date:2021-07-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Recreating the natural evolutionary trend in key microdomains provides an effective strategy for engineering of a thermomicrobial N-demethylase.
J.Biol.Chem., 298, 2022
7XSR
DownloadVisualize
BU of 7xsr by Molmil
Structure of Craspase-target RNA
Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (34-MER), ...
Authors:Feng, Y, Zhang, L.
Deposit date:2022-05-15
Release date:2022-11-09
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022
7XSQ
DownloadVisualize
BU of 7xsq by Molmil
Structure of the Craspase
Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (34-MER), ...
Authors:Feng, Y, Zhang, L.
Deposit date:2022-05-15
Release date:2022-11-09
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022
7XSO
DownloadVisualize
BU of 7xso by Molmil
Structure of the type III-E CRISPR-Cas effector gRAMP
Descriptor: RAMP superfamily protein, RNA (35-MER), ZINC ION
Authors:Feng, Y, Zhang, L.
Deposit date:2022-05-15
Release date:2023-03-22
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022
7XT4
DownloadVisualize
BU of 7xt4 by Molmil
Structure of Craspase-NTR
Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (34-MER), ...
Authors:Feng, Y, Zhang, L.
Deposit date:2022-05-16
Release date:2022-11-09
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022

224201

건을2024-08-28부터공개중

PDB statisticsPDBj update infoContact PDBjnumon